Nucleotide Global Alignment

Description

Query:
TRCN0000478540
Subject:
NM_001352804.2
Aligned Length:
2197
Identities:
996
Gaps:
1187

Alignment

Query    1  ATGAATAATATATTGAAACTTAAAAGCTCGGATTCTGAAGGTAATTTTGAGACTCCTGAAGCTGAAACCCCGAT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCGATCACCTTTCAAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCAC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AAGAAGCTGATGAACAGCTTGTAGCAGAAGTGGTTGAAAAATGTTCATCTAAGACTTGTTCTAAACCTTCAGAA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AATGAAGTGCCACAGCAGGCCATTGACTCTCACTCAGTCAAGAATTTCAGAGAAGAACCTGAACATGATTTTAG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAAAATTTCCATCGTGAGGCCATTTTCAATAGAAACGAAGGATTCCACGGATATCTCGGCAGTCCTCGGAACAA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AAGCAGCTCATGGCTGTGTAACTGCAGTCTCAGGCAAGGCTCTGCCTTCCAGCCCGCCAGACGCCCTCCAGGAC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GAGGCGATGACGGAAGGCAGCATGGGGGTCACCCTCGAGGCCTCCGCAGAAGCTGATCTAAAAGCTGGCAACTC  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CTGTCCAGAGCTTGTGCCCAGCAGAAGAAGCAAGCTGAGAAAGCCCAAGCCTGTCCCCCTGAGGAAGAAAGCAA  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  TTGGAGGAGAGTTCTCAGACACCAACGCTGCTGTGGAGGGCACACCTCTCCCCAAGGCATCCTATCACTTCAGT  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  CCTGAAGAGTTGGATGAGAACACAAGTCCTTTGCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGACCTTAA  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  AGAAACTCCCGGCACTCTCAGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGGGAGGAGTCGAGGAGCTCAC  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  CTCTCAAGCTTGAGTTTGATTTCACAGAAGATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAAGGAAGCTT  888
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  889  GGCAGGAAACTGGGTAGCACACTGACTCCCAAGATACAAAAAGATGGCATCAGTAAGTCAGCAGGTTTAGAACA  962
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  963  GCCTACAGACCCAGTGGCACGAGACGGGCCTCTCTCCCAAACATCTTCCAAGCCAGATCCTAGTCAGTGGGAGA  1036
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1037  GCCCCAGCTTCAACCCCTTTGGGAG----CCACTCTGTTCTGCAGAACTCCCCACCCCTCTCTTCTGAGGGCTC  1106
                              .||||||    |||||||      ||||   ||||             |||||   
Sbjct    1  ------------------ATGGGAGGCTCCCACTCT------CAGA---CCCC-------------GAGGG---  31

Query 1107  CTACCACTTTGACCCAGATAACTTTGACGAATCCATGGATCACTTTAAACCAACTACGACCTTAACAAGCAGTG  1180
                                     |.||       ||         ||||     ||.|....|.|.|||   
Sbjct   32  -------------------------GCCG-------GG---------AACC-----CGCCGGGGAGAGGCA---  56

Query 1181  ACTTTTGTTCTCCCACTGGTAATCACGTTAATGAAATCTTAGAATCACCCAAGAAGGCAAAGTCGCGTTTAATA  1254
                       |||                  ||           .|||||.|.||.|     ||         
Sbjct   57  -----------CCC------------------GA-----------GACCCACGGAGAC-----CG---------  76

Query 1255  ACGAGTGGCTGTAAGGTGAAGAAGCATGAAACTCAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAAGGGGC  1328
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   77  -CGAGTGGCTGTAAGGTGAAGAAGCATGAAACTCAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAAGGGGC  149

Query 1329  AGTGATCTCCCAGATTTCAGACATTTCTAATAGGGATGGCCATGCTACTGATGAGGAGAAACTGGCATCCACGT  1402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  150  AGTGATCTCCCAGATTTCAGACATTTCTAATAGGGATGGCCATGCTACTGATGAGGAGAAACTGGCATCCACGT  223

Query 1403  CATGTGGTCAGAAATCAGCTGGTGCCGAGGTGAAAGGCATAGAGAAGGAGACGTGCCAGAAGATGGAAGAAGAC  1476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  224  CATGTGGTCAGAAATCAGCTGGTGCCGAGGTGAAAGGCATAGAGAAGGAGACGTGCCAGAAGATGGAAGAAGAC  297

Query 1477  GGGTCCACTGTGCTTGGGCTGCTGGAGTCCTCTGCAGAGAAGGCCCCTGTGTCGGTGTCCTGTGGAGGTGAGAG  1550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  298  GGGTCCACTGTGCTTGGGCTGCTGGAGTCCTCTGCAGAGAAGGCCCCTGTGTCGGTGTCCTGTGGAGGTGAGAG  371

Query 1551  CCCCCTGGATGGGATCTGCCTCAGCGAATCAGACAAGACAGCCGTGCTCACCTTAATAAGAGAAGAGATAATTA  1624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  372  CCCCCTGGATGGGATCTGCCTCAGCGAATCAGACAAGACAGCCGTGCTCACCTTAATAAGAGAAGAGATAATTA  445

Query 1625  CCAAAGAGATTGAAGCAAATGAATGGAAGAAGAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGATGAGGAAA  1698
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  446  CTAAAGAGATTGAAGCAAATGAATGGAAGAAGAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGATGAGGAAA  519

Query 1699  ATTGTAGCTGAATATGAAAAGACTATTGCTCAAATGATTGAAGATGAACAAAGGACAAGTATGACCTCTCAGAA  1772
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  520  ATTGTAGCTGAATATGAAAAGACTATTGCTCAAATGATTGAAGATGAACAAAGGACAAGTATGACCTCTCAGAA  593

Query 1773  GAGCTTCCAGCAACTGACCATGGAGAAGGAACAGGCCCTGGCTGACCTTAACTCTGTGGAAAGGTCCCTTTCTG  1846
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  594  GAGCTTCCAGCAACTGACCATGGAGAAGGAACAGGCCCTGGCTGACCTTAACTCTGTGGAAAGGTCCCTTTCTG  667

Query 1847  ATCTCTTCAGGAGATATGAGAACCTGAAAGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAGCCTTGAAGAAA  1920
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  668  ATCTCTTCAGGAGATATGAGAACCTGAAAGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAGCCTTGAAGAAA  741

Query 1921  TGTGCTCAGGATTACTTAGCCAGAGTTAAACAAGAGGAGCAGCGATACCAGGCCCTGAAAATCCACGCAGAAGA  1994
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  742  TGTGCTCAGGATTACTTAGCCAGAGTTAAACAAGAGGAGCAGCGATACCAGGCCCTGAAAATCCACGCAGAAGA  815

Query 1995  GAAACTGGACAAAGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCATG  2068
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  816  GAAACTGGACAAAGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCATG  889

Query 2069  CTGGACTCCGCAAAGAGCAGATGAAGGTGGAGTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAATTGAA  2142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  890  CTGGACTCCGCAAAGAGCAGATGAAGGTGGAGTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAATTGAA  963

Query 2143  GAACTGACAAAAATCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACTGAC  2193
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  964  GAACTGACAAAAATCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACTGAC  1014

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