Nucleotide Global Alignment

Description

Query:
TRCN0000478540
Subject:
NR_148050.2
Aligned Length:
2914
Identities:
1916
Gaps:
851

Alignment

Query    1  ---------------------------------------------------------------------ATGAA  5
                                                                                 .||  
Sbjct    1  AGGAGAGATGCGAAATCAGCGGTAGCAGGTGGCGCAGAAGGGAGAGGGGAGCGACCCTGGGGACCGACTCTG--  72

Query    6  TAATATATTGAAACTT-----AAAAGCTCGGATTCTGAAGGTAATTTTGAGACTCCTGAAGCTGAAACCCCGAT  74
                    .|.|.|.|     ||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   73  --------GGGACCCTCGCCGAAGAGCTCGGATTCTGAAGGTAATTTTGAGACTCCTGAAGCTGAAACCCCGAT  138

Query   75  CCGATCACCTTTCAAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCAC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  139  CCGATCACCTTTCAAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCAC  212

Query  149  AAGAAGCTGATGAACAGCTTGTAGCAGAAGTGGTTGAAAAATGTTCATCTAAGACTTGTTCTAAACCTTCAGAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  213  AAGAAGCTGATGAACAGCTTGTAGCAGAAGTGGTTGAAAAATGTTCATCTAAGACTTGTTCTAAACCTTCAGAA  286

Query  223  AATGAAGTGCCACAGCAGGCCATTGACTCTCACTCAGTCAAGAATTTCAGAGAAGAACCTGAACATGATTTTAG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  287  AATGAAGTGCCACAGCAGGCCATTGACTCTCACTCAGTCAAGAATTTCAGAGAAGAACCTGAACATGATTTTAG  360

Query  297  CAAAATTTCCATCGTGAGGCCATTTTCAATAGAAACGAAGGATTCCACGGATATCTCGGCAGTCCTCGGAACAA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361  CAAAATTTCCATCGTGAGGCCATTTTCAATAGAAACGAAGGATTCCACGGATATCTCGGCAGTCCTCGGAACAA  434

Query  371  AAGCAGCTCATGGCTGTGTAACTGCAGTCTCAGGCAAGGCTCTGCCTTCCAGCCCGCCAGACGCCCTCCAGGAC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  435  AAGCAGCTCATGGCTGTGTAACTGCAGTCTCAGGCAAGGCTCTGCCTTCCAGCCCGCCAGACGCCCTCCAGGAC  508

Query  445  GAGGCGATGACGGAAGGCAGCATGGGGGTCACCCTCGAGGCCTCCGCAGAAGCTGATCTAAAAGCTGGCAACTC  518
            |||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  509  GAGGCGATGACAGAAGGCAGCATGGGGGTCACCCTCGAGGCCTCCGCAGAAGCTGATCTAAAAGCTGGCAACTC  582

Query  519  CTGTCCAGAGCTTGTGCCCAGCAGAAGAAGCAAGCTGAGAAAGCCCAAGCCTGTCCCCCTGAGGAAGAAAGCAA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  583  CTGTCCAGAGCTTGTGCCCAGCAGAAGAAGCAAGCTGAGAAAGCCCAAGCCTGTCCCCCTGAGGAAGAAAGCAA  656

Query  593  TTGGAGGAGAGTTCTCAGACACCAACGCTGCTGTGGAGGGCACACCTCTCCCCAAGGCATCCTATCACTTCAGT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  657  TTGGAGGAGAGTTCTCAGACACCAACGCTGCTGTGGAGGGCACACCTCTCCCCAAGGCATCCTATCACTTCAGT  730

Query  667  CCTGAAGAGTTGGATGAGAACACAAGTCCTTTGCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGACCTTAA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  731  CCTGAAGAGTTGGATGAGAACACAAGTCCTTTGCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGACCTTAA  804

Query  741  AGAAACTCCCGGCACTCTCAGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGGGAGGAGTCGAGGAGCTCAC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  805  AGAAACTCCCGGCACTCTCAGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGGGAGGAGTCGAGGAGCTCAC  878

Query  815  CTCTCAAGCTTGAGTTTGATTTCACAGAAGATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAAGGAAGCTT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  879  CTCTCAAGCTTGAGTTTGATTTCACAGAAGATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAAGGAAGCTT  952

Query  889  GGCAGGAAACTGGGTAGCACACTGACTCCCAAGATACAAAAAGATGGCATCAGTAAGTCAGCAGGTTTAGAACA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  953  GGCAGGAAACTGGGTAGCACACTGACTCCCAAGATACAAAAAGATGGCATCAGTAAGTCAGCAGGTTTAGAACA  1026

Query  963  GCCTACAGACCCAGTGGCACGAGACGGGCCTCTCTCCCAAACATCTTCCAAGCCAGATCCTAGTCAGTGGGAGA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1027  GCCTACAGACCCAGTGGCACGAGACGGGCCTCTCTCCCAAACATCTTCCAAGCCAGATCCTAGTCAGTGGGAAA  1100

Query 1037  GCCCCAGCTTCAACCCCTTTGGGAGCCACTCTGTTCTGCAGAACTCCCCACCCCTCTCTTCTGAGGGCTCCTAC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1101  GCCCCAGCTTCAACCCCTTTGGGAGCCACTCTGTTCTGCAGAACTCCCCACCCCTCTCTTCTGAGGGCTCCTAC  1174

Query 1111  CACTTTGACCCAGATAACTTTGACGAATCCATGGATCACTTTAAACCAACTACGACCTTAACAAGCAGTGACTT  1184
            |||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1175  CACTTTGACCCAGATAACTTTGACGAATCCATGGATCCCTTTAAACCAACTACGACCTTAACAAGCAGTGACTT  1248

Query 1185  TTGTTCTCCCACTGGTAATCACGTTAATGAAATCTTAGAATCACCCAAGAAGGCAAAGTCGCGTTTAATAACGA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249  TTGTTCTCCCACTGGTAATCACGTTAATGAAATCTTAGAATCACCCAAGAAGGCAAAGTCGCGTTTAATAACGA  1322

Query 1259  GTGGCTGTAAGGTGAAGAAGCATGAAACTCAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAAGGGGCAGTG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1323  GTGGCTGTAAGGTGAAGAAGCATGAAACTCAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAAGGGGCAGTG  1396

Query 1333  ATCTCCCAGATTTCAGACATTTCTAATAGGGATGGCCATGCTACTGATGAGGAGAAACTGGCATCCACGTCATG  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1397  ATCTCCCAGATTTCAGACATTTCTAATAGGGATGGCCATGCTACTGATGAGGAGAAACTGGCATCCACGTCATG  1470

Query 1407  TGGTCAGAAATCAGCTGGTGCCGAGGTGAAAGGCATAGAGAAGGAGACGTGCCAGAAGATGGAAGAAGACGGGT  1480
            |||||||||||||||||||||||||||||||||              .|.||||||    ||||||        
Sbjct 1471  TGGTCAGAAATCAGCTGGTGCCGAGGTGAAAGG--------------TGAGCCAGA----GGAAGA--------  1518

Query 1481  CCACTGTGCTTGGGCTGCTGGAGTCCTCTGCAGAGAAGGCCCCTGTGTCGGTGTCCTGTG--------------  1540
                            .|||||||.||.|     |||.|..||..|||     |||||||              
Sbjct 1519  ----------------CCTGGAGTACTTT-----GAATGTTCCAATGT-----TCCTGTGTCTACCATAAATCA  1566

Query 1541  -GAGGTGAGAGCCCC-----CTGG-ATGG-----GATCTGCCTC---------------AGC---GAATCAGAC  1584
             |.|.|...|.||.|     |.|| ||||     .||||.|.||               |||   |||  |..|
Sbjct 1567  TGCGTTTTCATCCTCAGAAGCAGGTATGGAAGCATATCTTCATCTTTCTAATGTACATAAGCATGGAA--ATGC  1638

Query 1585  AAGACAGCCGTGCTCACCTTAATAAGAGAAGAGATAA---TTACCAAAGAGATTGAAG--------CAAATGAA  1647
            ..||.||||          |||||| ||.|| ||..|   ||||   |||||||.|||        ||..||||
Sbjct 1639  CTGAAAGCC----------TAATAA-AGCAG-GAGGAGCCTTAC---AGAGATTAAAGAATTGGGTCACTTGAA  1697

Query 1648  -----------------------------------------TGGAA---------------------GAAGAAA  1659
                                                     |||||                     ||||.|.
Sbjct 1698  GGATAGATTTAGGATGCTGACCTATGCTTTGCTTCTTTACCTGGAAAAGGGACACAAAGTGCTTATTGAAGTAC  1771

Query 1660  T----ACGAAGAGACCC----GGCAAGAAGTTTTGGAGA------------TGAG-------GAA---------  1697
            |    |||.|||||..|    |.||||..||.|.|||||            ||||       |||         
Sbjct 1772  TAGGAACGTAGAGATACTTGTGACAAGTTGTATAGGAGATGCTGATGTATGTGAGACTGCTTGAATTTCTTTAT  1845

Query 1698  AATTGTAGCTGAATATG---------AAAAGACTA----------------------TTGCT-CAAATGA----  1735
            ||||.||..||||||||         .||||..||                      ||||| .|||.||    
Sbjct 1846  AATTTTATGTGAATATGGCCATATCTTAAAGTATAGTGGTGTGTTAGTTCATTTGCGTTGCTGTAAAGGAATAC  1919

Query 1736  TTGA-------------AGATGAACAAAG--------------------------GAC--------AAGTATG-  1761
            .|||             |.|.||| ||||                          |||        |||.||| 
Sbjct 1920  CTGAGAATGGCTAATTTATAGGAA-AAAGAGGTTTATTTGGTTCATGGTTCTGCAGACTGTAGAATAAGCATGG  1992

Query 1762  -ACC---------------------TCTCAGAAGAGCTTCC-----------------------AGCAACTG--  1788
             |||                     .|||||.| |||||||                       |||||.||  
Sbjct 1993  CACCAGTGCCTGCTTCTGGTGAGGGACTCAGGA-AGCTTCCAATCATGGTGGAAGGCAAGGGGGAGCAAGTGTG  2065

Query 1789  --ACCATGGAGA--------AGGAACAGG-------------CCCTGGCTGACCTTAACTCTGTGGAAAG----  1835
              | |||||.||        |||||.|||             .||.||||....|||||       ||||    
Sbjct 2066  TCA-CATGGCGAGAGGTGGGAGGAAGAGGGGGCGGGGAGGATGCCAGGCTATTTTTAAC-------AAAGATTT  2131

Query 1836  ---------------------GTCCCT--TT---------------CTGATCTCTTCAGGAGATATGAGAACC-  1870
                                 |||.||  ||               |..|.||.||||.|||..||..|..|| 
Sbjct 2132  CACAGAAACTAACAGCAAGAAGTCGCTCATTACCACAAGGAGGGCACCAAGCTATTCATGAGGGATCCGCTCCT  2205

Query 1871  -TGA----------------AAGG-------------TGTTCTGGA--AGGGTTCAAGAAGA------------  1900
             |||                .|||             ||||   ||  |||.|||||.|.||            
Sbjct 2206  ATGACCCAGCCACCTCCCATTAGGCCTCACTTCCAACTGTT---GATCAGGTTTCAACATGAGATTTAGGGGGC  2276

Query 1901  ---------------ATGAAGAAGCCTTGAAGAAATGTGCTCA-----------------GGATT---------  1933
                           ||.||...||||   |.||||.|| |||                 .||||         
Sbjct 2277  AAATATTTAAACTATATCAAATGGCCT---ATAAATATG-TCATATGTTTGACTTTTTTGTGATTGTTATACTC  2346

Query 1934  --------ACTTAGCCAGAGTTAAACAA--GAGGAGCA--------GCGATAC------CAGGCCCTG------  1977
                    ||||||  |||..| |||||  ||    ||        ||..|||      |||||..||      
Sbjct 2347  ATTGTTTAACTTAG--AGAAAT-AACAACTGA----CATGTATGGTGCCTTACCATGTACAGGCATTGTTTTAA  2413

Query 1978  -----------AAAATCCACGCAGA-----------------------------AGAGAAACTGGACA--AAGC  2009
                       |.|.| ||..||.|                             ||||||||   |.|  |||.
Sbjct 2414  GTGCTTTGCATATACT-CATTCATAGCAAGGTGTTACCCTTTTCTCACTTCTTCAGAGAAAC---AAAGTAAGT  2483

Query 2010  CAATGAAG----------AGATT-----------GCTCAGGTTCGAAC--AAAAG---------------CA--  2043
            |||.||||          .||||           ||| |||.|.|.||  |||||               ||  
Sbjct 2484  CAAAGAAGTTAAGTGACTTGATTAAAGTCACTTGGCT-AGGGTAGGACAGAAAAGTGGTATCTTTTTCCTCACC  2556

Query 2044  ---------AAGGCTGAGAGTGCAGCTCT-CCATGCTGGACTCCGCAAAGAGC----AGATGAAGGTGGA----  2099
                     |.||||||||   ||.|||| .||             |||||.|    |||..||.|||.|    
Sbjct 2557  ACAAGGTTCATGGCTGAGA---CATCTCTAACA-------------AAAGATCAACAAGAGAAAAGTGTACAAA  2614

Query 2100  -----------------GTCCCTGGAA--AGGGCCCTGCAGCA--GAAGAACCAA---------GAAA------  2137
                             .|.|.||..|  ||.| |||.|||.|  |||||.||||         ||||      
Sbjct 2615  TATATTTAATATAAGTTTTACATGACATTAGAG-CCTCCAGAAATGAAGACCCAAAGGAACAGGGAAAACTGTA  2687

Query 2138  ---------------TTGAAGAACT----------GACAAAAATCTGTGA--TGAGCTGATTGCAAAGCTGGGA  2184
                           .||.||||.|          ||||.||...|||||  ||.|.|.||   |||.|.|||.
Sbjct 2688  CTTTTATAGATAGTTGTGCAGAAGTATAATTGGAGGACAGAAGGGTGTGATCTGTGGTAAT---AAACCAGGGG  2758

Query 2185  AAGACTGAC-------------------  2193
            |  |||.|.                   
Sbjct 2759  A--ACTTAGCAAGTCCTGTTTGTTCCAA  2784

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