Nucleotide Global Alignment

Description

Query:
TRCN0000478540
Subject:
XM_005273628.1
Aligned Length:
2383
Identities:
2170
Gaps:
206

Alignment

Query    1  ------------------------------------------------------------------ATGAATAA  8
                                                                              |.|     
Sbjct    1  ATGGGAGGCTCCCACTCTCAGACCCCGAGGGGCCGGGAACCCGCCGGGGAGAGGCACCCGAGACCCACG-----  69

Query    9  TATATTGAAACTTAAAAG-CTCGGATTCTGAAGGTAATTTTGAGACTCCTGAAGCTGAAACCCCGATCCGATCA  81
                  ||.||     .| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   70  ------GAGAC-----CGCCTCGGATTCTGAAGGTAATTTTGAGACTCCTGAAGCTGAAACCCCGATCCGATCA  132

Query   82  CCTTTCAAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCACAAGAAGC  155
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  133  CCTTTCAAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCACAAGAAGC  206

Query  156  TGATGAACAGCTTGTAGCAGAAGTGGTTGAAAAATGTTCATCTAAGACTTGTTCTAAACCTTCAGAAAATGAAG  229
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  207  TGATGAACAGCTTGTAGCAGAAGTGGTTGAAAAATGTTCATCTAAGACTTGTTCTAAACCTTCAGAAAATGAAG  280

Query  230  TGCCACAGCAGGCCATTGACTCTCACTCAGTCAAGAATTTCAGAGAAGAACCTGAACATGATTTTAGCAAAATT  303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  281  TGCCACAGCAGGCCATTGACTCTCACTCAGTCAAGAATTTCAGAGAAGAACCTGAACATGATTTTAGCAAAATT  354

Query  304  TCCATCGTGAGGCCATTTTCAATAGAAACGAAGGATTCCACGGATATCTCGGCAGTCCTCGGAACAAAAGCAGC  377
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  355  TCCATCGTGAGGCCATTTTCAATAGAAACGAAGGATTCCACGGATATCTCGGCAGTCCTCGGAACAAAAGCAGC  428

Query  378  TCATGGCTGTGTAACTGCAGTCTCAGGCAAGGCTCTGCCTTCCAGCCCGCCAGACGCCCTCCAGGACGAGGCGA  451
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  429  TCATGGCTGTGTAACTGCAGTCTCAGGCAAGGCTCTGCCTTCCAGCCCGCCAGACGCCCTCCAGGACGAGGCGA  502

Query  452  TGACGGAAGGCAGCATGGGGGTCACCCTCGAGGCCTCCGCAGAAGCTGATCTAAAAGCTGGCAACTCCTGTCCA  525
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  503  TGACAGAAGGCAGCATGGGGGTCACCCTCGAGGCCTCCGCAGAAGCTGATCTAAAAGCTGGCAACTCCTGTCCA  576

Query  526  GAGCTTGTGCCCAGCAGAAGAAGCAAGCTGAGAAAGCCCAAGCCTGTCCCCCTGAGGAAGAAAGCAATTGGAGG  599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  577  GAGCTTGTGCCCAGCAGAAGAAGCAAGCTGAGAAAGCCCAAGCCTGTCCCCCTGAGGAAGAAAGCAATTGGAGG  650

Query  600  AGAGTTCTCAGACACCAACGCTGCTGTGGAGGGCACACCTCTCCCCAAGGCATCCTATCACTTCAGTCCTGAAG  673
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  651  AGAGTTCTCAGACACCAACGCTGCTGTGGAGGGCACACCTCTCCCCAAGGCATCCTATCACTTCAGTCCTGAAG  724

Query  674  AGTTGGATGAGAACACAAGTCCTTTGCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGACCTTAAAGAAACT  747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  725  AGTTGGATGAGAACACAAGTCCTTTGCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGACCTTAAAGAAACT  798

Query  748  CCCGGCACTCTCAGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGGGAGGAGTCGAGGAGCTCACCTCTCAA  821
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  799  CCCGGCACTCTCAGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGGGAGGAGTCGAGGAGCTCACCTCTCAA  872

Query  822  GCTTGAGTTTGATTTCACAGAAGATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGGA  895
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  873  GCTTGAGTTTGATTTCACAGAAGATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGGA  946

Query  896  AACTGGGTAGCACACTGACTCCCAAGATACAAAAAGATGGCATCAGTAAGTCAGCAGGTTTAGAACAGCCTACA  969
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  947  AACTGGGTAGCACACTGACTCCCAAGATACAAAAAGATGGCATCAGTAAGTCAGCAGGTTTAGAACAGCCTACA  1020

Query  970  GACCCAGTGGCACGAGACGGGCCTCTCTCCCAAACATCTTCCAAGCCAGATCCTAGTCAGTGGGAGAGCCCCAG  1043
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1021  GACCCAGTGGCACGAGACGGGCCTCTCTCCCAAACATCTTCCAAGCCAGATCCTAGTCAGTGGGAAAGCCCCAG  1094

Query 1044  CTTCAACCCCTTTGGGAGCCACTCTGTTCTGCAGAACTCCCCACCCCTCTCTTCTGAGGGCTCCTACCACTTTG  1117
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1095  CTTCAACCCCTTTGGGAGCCACTCTGTTCTGCAGAACTCCCCACCCCTCTCTTCTGAGGGCTCCTACCACTTTG  1168

Query 1118  ACCCAGATAACTTTGACGAATCCATGGATCACTTTAAACCAACTACGACCTTAACAAGCAGTGACTTTTGTTCT  1191
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1169  ACCCAGATAACTTTGACGAATCCATGGATCCCTTTAAACCAACTACGACCTTAACAAGCAGTGACTTTTGTTCT  1242

Query 1192  CCCACTGGTAATCACGTTAATGAAATCTTAGAATCACCCAAGAAGGCAAAGTCGCGTTTAATAAC---------  1256
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct 1243  CCCACTGGTAATCACGTTAATGAAATCTTAGAATCACCCAAGAAGGCAAAGTCGCGTTTAATAACGACTACTGA  1316

Query 1257  ---------------------------GAGTGGCTGTAAGGTGAAGAAGCATGAAACTCAGTCTCTCGCCCTGG  1303
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317  ACAAGTGAAATTTCTCTGTTTTCTGTTGAGTGGCTGTAAGGTGAAGAAGCATGAAACTCAGTCTCTCGCCCTGG  1390

Query 1304  ATGCATGTTCTCGGGATGAAGGGGCAGTGATCTCCCAGATTTCAGACATTTCTAATAGGGATGGCCATGCTACT  1377
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1391  ATGCATGTTCTCGGGATGAAGGGGCAGTGATCTCCCAGATTTCAGACATTTCTAATAGGGATGGCCATGCTACT  1464

Query 1378  GATGAGGAGAAACTGGCATCCACGTCATGTGGTCAGAAATCAGCTGGTGCCGAGGTGAA---------------  1436
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               
Sbjct 1465  GATGAGGAGAAACTGGCATCCACGTCATGTGGTCAGAAATCAGCTGGTGCCGAGGTGAAAGGTGAGCCAGAGGA  1538

Query 1437  ------------------------------------------------------------------------AG  1438
                                                                                    ||
Sbjct 1539  AGACCTGGAGTACTTTGAATGTTCCAATGTTCCTGTGTCTACCATAAATCATGCGTTTTCATCCTCAGAAGCAG  1612

Query 1439  GCATAGAGAAGGAGACGTGCCAGAAGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGCTGGAGTCCTCTGCA  1512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1613  GCATAGAGAAGGAGACGTGCCAGAAGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGCTGGAGTCCTCTGCA  1686

Query 1513  GAGAAGGCCCCTGTGTCGGTGTCCTGTGGAGGTGAGAGCCCCCTGGATGGGATCTGCCTCAGCGAATCAGACAA  1586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1687  GAGAAGGCCCCTGTGTCGGTGTCCTGTGGAGGTGAGAGCCCCCTGGATGGGATCTGCCTCAGCGAATCAGACAA  1760

Query 1587  GACAGCCGTGCTCACCTTAATAAGAGAAGAGATAATTACCAAAGAGATTGAAGCAAATGAATGGAAGAAGAAAT  1660
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1761  GACAGCCGTGCTCACCTTAATAAGAGAAGAGATAATTACTAAAGAGATTGAAGCAAATGAATGGAAGAAGAAAT  1834

Query 1661  ACGAAGAGACCCGGCAAGAAGTTTTGGAGATGAGGAAAATTGTAGCTGAATATGAAAAGACTATTGCTCAAATG  1734
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1835  ACGAAGAGACCCGGCAAGAAGTTTTGGAGATGAGGAAAATTGTAGCTGAATATGAAAAGACTATTGCTCAAATG  1908

Query 1735  ATTGAAGATGAACAAAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGGC  1808
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1909  ATTGAAGATGAACAAAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGGC  1982

Query 1809  CCTGGCTGACCTTAACTCTGTGGAAAGGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACCTGAAAGGTGTTC  1882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1983  CCTGGCTGACCTTAACTCTGTGGAAAGGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACCTGAAAGGTGTTC  2056

Query 1883  TGGAAGGGTTCAAGAAGAATGAAGAAGCCTTGAAGAAATGTGCTCAGGATTACTTAGCCAGAGTTAAACAAGAG  1956
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2057  TGGAAGGGTTCAAGAAGAATGAAGAAGCCTTGAAGAAATGTGCTCAGGATTACTTAGCCAGAGTTAAACAAGAG  2130

Query 1957  GAGCAGCGATACCAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGACAAAGCCAATGAAGAGATTGCTCAGGT  2030
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2131  GAGCAGCGATACCAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGACAAAGCCAATGAAGAGATTGCTCAGGT  2204

Query 2031  TCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGTGGAGTCCC  2104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2205  TCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGTGGAGTCCC  2278

Query 2105  TGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTGACAAAAATCTGTGATGAGCTGATTGCAAAG  2178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2279  TGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTGACAAAAATCTGTGATGAGCTGATTGCAAAG  2352

Query 2179  CTGGGAAAGACTGAC  2193
            |||||||||||||||
Sbjct 2353  CTGGGAAAGACTGAC  2367

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