Nucleotide Global Alignment

Description

Query:
TRCN0000479067
Subject:
NM_001244960.1
Aligned Length:
1683
Identities:
586
Gaps:
1067

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCAGCTTTCAAAGAGGGAAACCAAAGGGCAGTTTCTCATTGACCACATCTGCAACTACTACAGCCTGCTGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAAGGACTACTTTGGCATTCGCTATGTGGACCCAGAGAAGCAAAGGCACTGGCTTGAACCTAACAAGTCCATCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCAAGCAAATGAAAACTCATCCACCATACACCATGTGCTTTAGAGTGAAATTCTACCCACATGAACCCTTGAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATTAAAGAAGAGCTCACAAGATACCTTTTATACCTTCAGATTAAAAGGGACATTTTTCATGGCCGCCTGCTGTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCCTTTTCTGATGCTGCCTACCTGGGTGCCTGTATTGTTCAAGCTGAGCTTGGTGATTACGATCCTGATGAGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCCTGAGAATTACATCAGTGAGTTTGAGATTTTCCCCAAGCAGTCACAGAAGCTGGAAAGAAAAATAGTGGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATTCATAAAAATGAACTCAGGGGGCAGAGCCCACCAGTTGCTGAATTTAACTTGCTCCTGAAAGCTCACACTTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGAAACCTACGGGGTGGATCCTCACCCATGCAAGGATTCAACAGGCACAACAACATTTTTAGGATTCACAGCTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAGGCTTTGTGGTCTTTCAGGGAAATAAGAGAATCCATTTGATAAAATGGCCAGATGTCTGCAAATTGAAGTTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAAGGGAAGACATTTTATGTGATTGGCACCCAGAAGGAGAAAAAAGCCATGTTGGCATTCCATACTTCAACACC  740

Query    1  ---------------------------------------------------------------ATGCAGGCCGA  11
                                                                           ||.|||.|.||
Sbjct  741  AGCTGCCTGCAAACATCTTTGGAAGTGTGGAGTGGAAAACCAGGCCTTTTATAAGTATGCAAAATCCAGTCAGA  814

Query   12  -GGAGAC-----CAAG-------------------GG-----GATT-----------GGAATAACCAGTATGGC  44
             ..||||     ||||                   ||     ||||           ||||     ||| ||.|
Sbjct  815  TCAAGACTGTATCAAGCAGCAAGATATTTTTTAAAGGAAGTAGATTTCGATATAGTGGGAA-----AGT-TGCC  882

Query   45  AAA-ATGCTTGGT------------CAAGATCCAGACTCGACGAAGCCTCC--AATTGCACATGGTGAA-----  98
            ||| |.|  ||||            |||||||||     ||.|.|||||||  |..||||||..|..||     
Sbjct  883  AAAGAGG--TGGTGGAGGCCAGTTCCAAGATCCA-----GAGGGAGCCTCCTGAGGTGCACAGAGCCAACATTA  949

Query   99  ----------------CCACTGC-------AACAG--------TAATGTGTTTGTTCGTCTGCTGAGACTCGGC  141
                            |||||.|       |||||        |||..||   |..|..||||  ||.|.|.||
Sbjct  950  CTCAGAGCCGCAGTTCCCACTCCTTGAACAAACAGCTCATCATTAACATG---GAACCCCTGC--AGCCCCTGC  1018

Query  142  -----TCCAAGGTCACAGCTCGTAA-------CACT-------------GGTGTTCCATTGCCTAAAGAGGAGA  190
                 |||     |.||||..|.||       .|||             |||||||||||||||||||||||||
Sbjct 1019  TTCCTTCC-----CCCAGCGAGCAAGAAGAAGAACTTCCTCTGGGTGAGGGTGTTCCATTGCCTAAAGAGGAGA  1087

Query  191  ACATTTCTGCTCCCTTGATCTCCAGCTCCCCCAGTGAAGGCAGCCCGGGAGTATGAAGATCCCCCTAGTGAAGA  264
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088  ACATTTCTGCTCCCTTGATCTCCAGCT-CCCCAGTGAAGGCAGCCCGGGAGTATGAAGATCCCCCTAGTGAAGA  1160

Query  265  GGAAGATAAAATAAAAGAAGAACCTTTAACCATCTCTGAACTAGTGTACAACCCAAGTGCCAGCCTGCTCCCCA  338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1161  GGAAGATAAAATAAAAGAAGAACCTTTAACCATCTCTGAACTAGTGTACAACCCAAGTGCCAGCCTGCTCCCCA  1234

Query  339  CCCCTGTGGATGACGATGAGATTGACATGCTCTTTGACTGTCCTTCTAGGCTTGAGTTGGAAAGAGAAGACACA  412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1235  CCCCTGTGGATGACGATGAGATTGACATGCTCTTTGACTGTCCTTCTAGGCTTGAGTTGGAAAGAGAAGACACA  1308

Query  413  GATTCATTTGAGGATCTGGAAGCAGATGAAAACGCCTTTTTGATTGCTGAAGAAGAGGAGCTGAAGGAGGCTCG  486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1309  GATTCATTTGAGGATCTGGAAGCAGATGAAAACGCCTTTTTGATTGCTGAAGAAGAGGAGCTGAAGGAGGCTCG  1382

Query  487  CCGTGCTTTGTCGTGGAGCTATGACATTCTGACTGGCCATATTCGGGTGAACCCACTGGTCAAGAGTTTTTCCA  560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1383  CCGTGCTTTGTCGTGGAGCTATGACATTCTGACTGGCCATATTCGGGTGAACCCACTGGTCAAGAGTTTTTCCA  1456

Query  561  GGCTCCTTGTGGTGGGCCTGGGACTGCTGCTCTTTGTATTTCCCCTGCTCCTCCTCCTTTTGGAGTCAG-----  629
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct 1457  GGCTCCTTGTGGTGGGCCTGGGACTGCTGCTCTTTGTATTTCCCCTGCTCCTCCTCCTTTTGGAGTCAGGTATT  1530

Query  630  ----TCTCC-----ATG----------CAG--------------------------------------------  640
                |||||     |||          |||                                            
Sbjct 1531  GATCTCTCCTTCTTATGCGAAATCCGCCAGACACCAGAGTTTGAGCAGTTTCACTATGAATACTACTGTCCCCT  1604

Query  641  -------------------------------------------------------  640
                                                                   
Sbjct 1605  CAAGGAGTGGGTGGCTGGGAAAGTCCACCTCATCCTCTACATGCTGGGTTGCTCA  1659

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