Nucleotide Global Alignment

Description

Query:
TRCN0000479685
Subject:
XM_005260516.2
Aligned Length:
2556
Identities:
1395
Gaps:
1161

Alignment

Query    1  ATGAACTACGTGGGGCAGCTGGCGGAGACGGTGTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTGAACCCAGC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAACTACGTGGGGCAGCTGGCGGAGACGGTGTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTGAACCCAGC  74

Query   75  CACACTGAGCGGCGGCATTGACGTGCTGGTGGTGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACCCTTCCACG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CACACTGAGCGGCGGCATTGACGTGCTGGTGGTGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACCCTTCCACG  148

Query  149  TGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCGCGGGAGAAGGTGGTAGACATTGAGCTCAATGGGGAGCCTGTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCGCGGGAGAAGGTGGTAGACATTGAGCTCAATGGGGAGCCTGTG  222

Query  223  GACTTGCACATGAAGCTTGGGGACAGCGGGGAGGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGATGAACATGT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GACTTGCACATGAAGCTTGGGGACAGCGGGGAGGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGATGAACATGT  296

Query  297  GCCTCCCGGCCTGTGCACCTCACCCATCCCTTGGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCAGCTGGGCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCTCCCGGCCTGTGCACCTCACCCATCCCTTGGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCAGCTGGGCA  370

Query  371  CTGCCAGTGAGCCTGAGGGCCTCGTCATGGCAGGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTCGCAGGAGG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTGCCAGTGAGCCTGAGGGCCTCGTCATGGCAGGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTCGCAGGAGG  444

Query  445  AAACCCAAGCAGAAAGAGGATGCAGTGGCAACTGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCTGAGAGTGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAACCCAAGCAGAAAGAGGATGCAGTGGCAACTGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCTGAGAGTGA  518

Query  519  GCTATCCCTGCCGGAAAAGCTGAGGCCAGAGCCCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTCACTGCAGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTATCCCTGCCGGAAAAGCTGAGGCCAGAGCCCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTCACTGCAGC  592

Query  593  CCAAAGACATCTACCCCTACTCGGATGGCGAGTGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGCTAACATCC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCAAAGACATCTACCCCTACTCGGATGGCGAGTGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGCTAACATCC  666

Query  667  CCTAAGAGCGACTCGGAGCTGGAGGTGCGGACCCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCACATGCAGTG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCTAAGAGCGACTCGGAGCTGGAGGTGCGGACCCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCACATGCAGTG  740

Query  741  GGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAGCTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGGCAGAGCTG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAGCTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGGCAGAGCTG  814

Query  815  GGGCAACCTCTCCTCCTCGGGGAGGACCCAGCACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACCCTTTGGGA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GGGCAACCTCTCCTCCTCGGGGAGGACCCAGCACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACCCTTTGGGA  888

Query  889  CTCCCAATCCAGCAAACAGAGGCTGGTGCCGACCTTCAGCCTGACACAGAGGATCCCACTCTAGTGGGTCCCCC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTCCCAATCCAGCAAACAGAGGCTGGTGCCGACCTTCAGCCTGACACAGAGGATCCCACTCTAGTGGGTCCCCC  962

Query  963  TCTCCACACCCCAGAGACAGAGGAAAGCAAGACTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGCCTCCAAGT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCTCCACACCCCAGAGACAGAGGAAAGCAAGACTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGCCTCCAAGT  1036

Query 1037  CATGGAGCTGGGCCACTCTGGAGGTTCCAGTTCCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGAAAGGCTCC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CATGGAGCTGGGCCACTCTGGAGGTTCCAGTTCCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGAAAGGCTCC  1110

Query 1111  CCAAAGAGAAGCCAGCACCTGGGCCCCAGTGACATCTACCTGGATGACTTGCCCTCCCTGGACTCTGAGAATGC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCAAAGAGAAGCCAGCACCTGGGCCCCAGTGACATCTACCTGGATGACTTGCCCTCCCTGGACTCTGAGAATGC  1184

Query 1185  AGCGCTTTACTTCCCCCAAAGTGACTCTGGGCTGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCAGAAGTCCC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGCGCTTTACTTCCCCCAAAGTGACTCTGGGCTGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCAGAAGTCCC  1258

Query 1259  TGAGGGACCCCAACCCTGAACATGAACCTGAACCCACTCTGGACACAGTGGATACAATAGCACTGTCCCTCTGT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGAGGGACCCCAACCCTGAACATGAACCTGAACCCACTCTGGACACAGTGGATACAATAGCACTGTCCCTCTGT  1332

Query 1333  GGTGGACTGGCTGACAGCCGGGACATCTCCCTAGAGAAATTCAACCAGCACAGCGTCTCTTACCAGGACCTCAC  1406
            ||||||||||||||||||||||||||||||||                                ||||||||||
Sbjct 1333  GGTGGACTGGCTGACAGCCGGGACATCTCCCT--------------------------------AGGACCTCAC  1374

Query 1407  CAAAAACCCCGGACTTTTGGATGACCCAAACCTAGTGGTGAAAATCAATGGAAAGCATTATAACTGGGCTGTGG  1480
            |||||||||||||||||||||                                                     
Sbjct 1375  CAAAAACCCCGGACTTTTGGA-----------------------------------------------------  1395

Query 1481  CTGCCCCCATGATCCTCTCCCTGCAAGCCTTCCAGAAAAACTTGCCCAAGAGCACCATGGACAAGCTGGAGAGG  1554
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 1555  GAGAAGATGCCCCGGAAGGGTGGGCGATGGTGGTTTTCCTGGCGACGCAGGGACTTCCTGGCCGAGGAGCGCAG  1628
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 1629  TGCCCAGAAGGAGAAGACTGCAGCCAAGGAGCAGCAGGGGGAGAAGACAGAAGTCCTGAGCAGTGATGACGATG  1702
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 1703  CCCCAGACAGCCCTGTGATCCTGGAGATCCCCTCCTTGCCACCCTCCACTCCACCCTCCACTCCTACCTACAAG  1776
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 1777  AAGTCCCTCCGCCTCTCCTCCGATCAGATCCGGCGCCTGAACCTGCAAGAAGGTGCCAATGATGTGGTCTTCAG  1850
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 1851  CGTGACCACTCAGTACCAGGGCACCTGCCGCTGCAAGGCCACCATCTACCTGTGGAAATGGGACGACAAGGTGG  1924
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 1925  TCATCTCTGACATCGACGGCACCATCACCAAGTCAGATGCTCTGGGCCATATCCTGCCCCAGCTGGGGAAAGAC  1998
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 1999  TGGACACACCAGGGCATCACCAGTCTCTATCACAAAATCCAACTAAATGGGTACAAGTTCCTGTACTGCTCGGC  2072
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 2073  GCGGGCCATTGGCATGGCGGACCTCACCAAGGGGTACCTGCAGTGGGTGAGCGAGGGGGGCTGTAGCCTCCCCA  2146
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 2147  AGGGCCCCATCCTTCTGTCTCCCAGCAGCCTCTTCTCTGCCCTCCACAGAGAGGTGATCGAGAAGAAACCAGAG  2220
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 2221  GTGTTCAAGGTCGCCTGCCTGAGTGACATCCAGCAGCTGTTTCTGCCCCACGGACAGCCCTTCTATGCTGCCTT  2294
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 2295  TGGGAATAGGCCCAATGATGTCTTTGCCTACCGGCAGGTGGGCCTGCCTGAGTCACGCATCTTCACAGTCAACC  2368
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 2369  CCCGGGGAGAGCTCATCCAGGAGCTCATAAAGAACCACAAATCCACGTATGAGCGGCTTGGTGAAGTGGTCGAG  2442
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 2443  CTCCTCTTCCCACCTGTGGCCCGTGGCCCCAGCACAGACCTGGCCAACCCTGAATACAGTAACTTCTGCTACTG  2516
                                                                                      
Sbjct 1396  --------------------------------------------------------------------------  1395

Query 2517  GCGGGAGCCACTGCCTGCTGTGGACCTTGATACCCTGGAC  2556
                                                    
Sbjct 1396  ----------------------------------------  1395

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