Nucleotide Global Alignment

Description

Query:
TRCN0000479685
Subject:
XM_006723863.2
Aligned Length:
2574
Identities:
1395
Gaps:
1167

Alignment

Query    1  ATGAACTACGTGGGGCAGCTGGCGGAGACGGTGTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTGAACCCAGC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAACTACGTGGGGCAGCTGGCGGAGACGGTGTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTGAACCCAGC  74

Query   75  CACACTGAGCGGCGGCATTGACGTGCTGGTGGTGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACCCTTCCACG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CACACTGAGCGGCGGCATTGACGTGCTGGTGGTGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACCCTTCCACG  148

Query  149  TGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCGCGGGAGAAGGTGGTAGACATTGAGCTCAATGGGGAGCCTGTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCGCGGGAGAAGGTGGTAGACATTGAGCTCAATGGGGAGCCTGTG  222

Query  223  GACTTGCACATGAAGCTTGGGGACAGCGGGGAGGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGATGAACATGT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GACTTGCACATGAAGCTTGGGGACAGCGGGGAGGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGATGAACATGT  296

Query  297  GCCTCCCGGCCTGTGCACCTCACCCATCCCTTGGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCAGCTGGGCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCTCCCGGCCTGTGCACCTCACCCATCCCTTGGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCAGCTGGGCA  370

Query  371  CTGCCAGTGAGCCTGAGGGCCTCGTCATGGCAGGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTCGCAGGAGG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTGCCAGTGAGCCTGAGGGCCTCGTCATGGCAGGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTCGCAGGAGG  444

Query  445  AAACCCAAGCAGAAAGAGGATGCAGTGGCAACTGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCTGAGAGTGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAACCCAAGCAGAAAGAGGATGCAGTGGCAACTGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCTGAGAGTGA  518

Query  519  GCTATCCCTGCCGGAAAAGCTGAGGCCAGAGCCCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTCACTGCAGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTATCCCTGCCGGAAAAGCTGAGGCCAGAGCCCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTCACTGCAGC  592

Query  593  CCAAAGACATCTACCCCTACTCGGATGGCGAGTGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGCTAACATCC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCAAAGACATCTACCCCTACTCGGATGGCGAGTGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGCTAACATCC  666

Query  667  CCTAAGAGCGACTCGGAGCTGGAGGTGCGGACCCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCACATGCAGTG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCTAAGAGCGACTCGGAGCTGGAGGTGCGGACCCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCACATGCAGTG  740

Query  741  GGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAGCTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGGCAGAGCTG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAGCTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGGCAGAGCTG  814

Query  815  GGGCAACCTCTCCTCCTCGGGGAGGACCCAGCACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACCCTTTGGGA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GGGCAACCTCTCCTCCTCGGGGAGGACCCAGCACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACCCTTTGGGA  888

Query  889  CTCCCAATCCAGCAAACAGAGGCTGGTGCCGACCTTCAGCCTGACACAGAGGATCCCACTCTAGTGGGTCCCCC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTCCCAATCCAGCAAACAGAGGCTGGTGCCGACCTTCAGCCTGACACAGAGGATCCCACTCTAGTGGGTCCCCC  962

Query  963  TCTCCACACCCCAGAGACAGAGGAAAGCAAGACTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGCCTCCAAGT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCTCCACACCCCAGAGACAGAGGAAAGCAAGACTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGCCTCCAAGT  1036

Query 1037  CATGGAGCTGGGCCACTCTGGAGGTTCCAGTTCCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGAAAGGCTCC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CATGGAGCTGGGCCACTCTGGAGGTTCCAGTTCCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGAAAGGCTCC  1110

Query 1111  CCAAAGAGAAGCCAGCACCTGGGCCCCAGTGACATCTACCTGGATGACTTGCCCTCCCTGGACTCTGAGAATGC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCAAAGAGAAGCCAGCACCTGGGCCCCAGTGACATCTACCTGGATGACTTGCCCTCCCTGGACTCTGAGAATGC  1184

Query 1185  AGCGCTTTACTTCCCCCAAAGTGACTCTGGGCTGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCAGAAGTCCC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGCGCTTTACTTCCCCCAAAGTGACTCTGGGCTGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCAGAAGTCCC  1258

Query 1259  TGAGGGACCCCAACCCTGAACATGAACCTGAACCCACTCTGGACACAGTGGATACAATAGCACTGTCCCTCTGT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGAGGGACCCCAACCCTGAACATGAACCTGAACCCACTCTGGACACAGTGGATACAATAGCACTGTCCCTCTGT  1332

Query 1333  GGTGGACTGGCTGACAGCCGGGACATCTCCCTAG---------------AG---AAATTCAACCAGCACAGCGT  1388
            ||||||||||||||||||||||||||||||||||               ||   |.|.||..||||  |||.|.
Sbjct 1333  GGTGGACTGGCTGACAGCCGGGACATCTCCCTAGCTCTCTGCCCTGTGCAGTCCACACTCCGCCAG--CAGGGG  1404

Query 1389  CTCTTACCAGGACCTCACCAAAAACCCCGGACTTTTGGATGACCCAAACCTAGTGGTGAAAATCAATGGAAAGC  1462
            ||       ||||||..||||...|||.                                              
Sbjct 1405  CT-------GGACCTTCCCAAGTCCCCA----------------------------------------------  1425

Query 1463  ATTATAACTGGGCTGTGGCTGCCCCCATGATCCTCTCCCTGCAAGCCTTCCAGAAAAACTTGCCCAAGAGCACC  1536
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 1537  ATGGACAAGCTGGAGAGGGAGAAGATGCCCCGGAAGGGTGGGCGATGGTGGTTTTCCTGGCGACGCAGGGACTT  1610
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 1611  CCTGGCCGAGGAGCGCAGTGCCCAGAAGGAGAAGACTGCAGCCAAGGAGCAGCAGGGGGAGAAGACAGAAGTCC  1684
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 1685  TGAGCAGTGATGACGATGCCCCAGACAGCCCTGTGATCCTGGAGATCCCCTCCTTGCCACCCTCCACTCCACCC  1758
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 1759  TCCACTCCTACCTACAAGAAGTCCCTCCGCCTCTCCTCCGATCAGATCCGGCGCCTGAACCTGCAAGAAGGTGC  1832
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 1833  CAATGATGTGGTCTTCAGCGTGACCACTCAGTACCAGGGCACCTGCCGCTGCAAGGCCACCATCTACCTGTGGA  1906
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 1907  AATGGGACGACAAGGTGGTCATCTCTGACATCGACGGCACCATCACCAAGTCAGATGCTCTGGGCCATATCCTG  1980
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 1981  CCCCAGCTGGGGAAAGACTGGACACACCAGGGCATCACCAGTCTCTATCACAAAATCCAACTAAATGGGTACAA  2054
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 2055  GTTCCTGTACTGCTCGGCGCGGGCCATTGGCATGGCGGACCTCACCAAGGGGTACCTGCAGTGGGTGAGCGAGG  2128
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 2129  GGGGCTGTAGCCTCCCCAAGGGCCCCATCCTTCTGTCTCCCAGCAGCCTCTTCTCTGCCCTCCACAGAGAGGTG  2202
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 2203  ATCGAGAAGAAACCAGAGGTGTTCAAGGTCGCCTGCCTGAGTGACATCCAGCAGCTGTTTCTGCCCCACGGACA  2276
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 2277  GCCCTTCTATGCTGCCTTTGGGAATAGGCCCAATGATGTCTTTGCCTACCGGCAGGTGGGCCTGCCTGAGTCAC  2350
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 2351  GCATCTTCACAGTCAACCCCCGGGGAGAGCTCATCCAGGAGCTCATAAAGAACCACAAATCCACGTATGAGCGG  2424
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 2425  CTTGGTGAAGTGGTCGAGCTCCTCTTCCCACCTGTGGCCCGTGGCCCCAGCACAGACCTGGCCAACCCTGAATA  2498
                                                                                      
Sbjct 1426  --------------------------------------------------------------------------  1425

Query 2499  CAGTAACTTCTGCTACTGGCGGGAGCCACTGCCTGCTGTGGACCTTGATACCCTGGAC  2556
                                                                      
Sbjct 1426  ----------------------------------------------------------  1425

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