Nucleotide Global Alignment

Description

Query:
TRCN0000479685
Subject:
XM_011529002.3
Aligned Length:
2801
Identities:
2083
Gaps:
718

Alignment

Query    1  ATGAACTACGTGGGGCAGCTGGCGGAGACGGTGTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTGAACCCAGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CACACTGAGCGGCGGCATTGACGTGCTGGTGGTGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACCCTTCCACG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCGCGGGAGAAGGTGGTAGACATTGAGCTCAATGGGGAGCCTGTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GACTTGCACATGAAGCTTGGGGACAGCGGGGAGGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGATGAACATGT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GCCTCCCGGCCTGTGCACCTCACCCATCCCTTGGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCAGCTGGGCA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CTGCCAGTGAGCCTGAGGGCCTCGTCATGGCAGGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTCGCAGGAGG  444
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  --------------------------ATGGCAGGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTCGCAGGAGG  48

Query  445  AAACCCAAGCAGAAAGAGGATGCAGTGGCAACTGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCTGAGAGTGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   49  AAACCCAAGCAGAAAGAGGATGCAGTGGCAACTGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCTGAGAGTGA  122

Query  519  GCTATCCCTGCCGGAAAAGCTGAGGCCAGAGCCCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTCACTGCAGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  123  GCTATCCCTGCCGGAAAAGCTGAGGCCAGAGCCCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTCACTGCAGC  196

Query  593  CCAAAGACATCTACCCCTACTCGGATGGCGAGTGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGCTAACATCC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  197  CCAAAGACATCTACCCCTACTCGGATGGCGAGTGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGCTAACATCC  270

Query  667  CCTAAGAGCGACTCGGAGCTGGAGGTGCGGACCCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCACATGCAGTG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  271  CCTAAGAGCGACTCGGAGCTGGAGGTGCGGACCCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCACATGCAGTG  344

Query  741  GGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAGCTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGGCAGAGCTG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  345  GGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAGCTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGGCAGAGCTG  418

Query  815  GGGCAACCTCTCCTCCTCGGGGAGGACCCAGCACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACCCTTTGGGA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  419  GGGCAACCTCTCCTCCTCGGGGAGGACCCAGCACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACCCTTTGGGA  492

Query  889  CTCCCAATCCAGCAAACAGAGGCTGGTGCCGACCTTCAGCCTGACACAGAGGATCCCACTCTAGTGGGTCCCCC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  493  CTCCCAATCCAGCAAACAGAGGCTGGTGCCGACCTTCAGCCTGACACAGAGGATCCCACTCTAGTGGGTCCCCC  566

Query  963  TCTCCACACCCCAGAGACAGAGGAAAGCAAGACTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGCCTCCAAGT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  567  TCTCCACACCCCAGAGACAGAGGAAAGCAAGACTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGCCTCCAAGT  640

Query 1037  CATGGAGCTGGGCCACTCTGGAGGTTCCAGTTCCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGAAAGGCTCC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  641  CATGGAGCTGGGCCACTCTGGAGGTTCCAGTTCCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGAAAGGCTCC  714

Query 1111  CCAAAGAGAAGCCAGCACCTGGGCCCCAGTGACATCTACCTGGATGACTTGCCCTCCCTGGACTCTGAGAATGC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  715  CCAAAGAGAAGCCAGCACCTGGGCCCCAGTGACATCTACCTGGATGACTTGCCCTCCCTGGACTCTGAGAATGC  788

Query 1185  AGCGCTTTACTTCCCCCAAAGTGACTCTGGGCTGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCAGAAGTCCC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  789  AGCGCTTTACTTCCCCCAAAGTGACTCTGGGCTGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCAGAAGTCCC  862

Query 1259  TGAGGGACCCCAACCCTGAACATGAACCTGAACCCACTCTGGACACAGTGGATACAATAGCACTGTCCCTCTGT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  863  TGAGGGACCCCAACCCTGAACATGAACCTGAACCCACTCTGGACACAGTGGATACAATAGCACTGTCCCTCTGT  936

Query 1333  GGTGGACTGGCTGACAGCCGGGACATCTCCCTAGAGAAATTCAACCAGCACAGCGTCTCTTACCAGGACCTCAC  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  937  GGTGGACTGGCTGACAGCCGGGACATCTCCCTAGAGAAATTCAACCAGCACAGCGTCTCTTACCAGGACCTCAC  1010

Query 1407  CAAAAACCCCGGACTTTTGGATGACCCAAACCTAGTGGTGAAAATCAATGGAAAGCATTATAACTGGGCTGTGG  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011  CAAAAACCCCGGACTTTTGGATGACCCAAACCTAGTGGTGAAAATCAATGGAAAGCATTATAACTGGGCTGTGG  1084

Query 1481  CTGCCCCCATGATCCTCTCCCTGCAAGCCTTCCAGAAAAACTTGCCCAAGAGCACCATGGACAAGCTGGAGAGG  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1085  CTGCCCCCATGATCCTCTCCCTGCAAGCCTTCCAGAAAAACTTGCCCAAGAGCACCATGGACAAGCTGGAGAGG  1158

Query 1555  GAGAAGATGCCCCGGAAGGGTGGGCGATGGTGGTTTTCCTGGCGACGCAGGGACTTCCTGGCCGAGGAGCGCAG  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1159  GAGAAGATGCCCCGGAAGGGTGGGCGATGGTGGTTTTCCTGGCGACGCAGGGACTTCCTGGCCGAGGAGCGCAG  1232

Query 1629  TGCCCAGAAGGAGAAGACTGCAGCCAAGGAGCAGCAGGGGGAGAAGACAGAAGTCCTGAGCAGTGATGACGATG  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1233  TGCCCAGAAGGAGAAGACTGCAGCCAAGGAGCAGCAGGGGGAGAAGACAGAAGTCCTGAGCAGTGATGACGATG  1306

Query 1703  CCCCAGACAGCCCTGTGATCCTGGAGATCCCCTCCTTGCCACCCTCCACTCCACCCTCCACTCCTACCTACAAG  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1307  CCCCAGACAGCCCTGTGATCCTGGAGATCCCCTCCTTGCCACCCTCCACTCCACCCTCCACTCCTACCTACAAG  1380

Query 1777  AAGTCCCTCCGCCTCTCCTCCGATCAGATCCGGCGCCTGAACCTGCAAGAAGGTGCCAATGATGTGGTCTTCAG  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381  AAGTCCCTCCGCCTCTCCTCCGATCAGATCCGGCGCCTGAACCTGCAAGAAGGTGCCAATGATGTGGTCTTCAG  1454

Query 1851  CGTGACCACTCAGTACCAGGGCACCTGCCGCTGCAAGGCCACCATCTACCTGTGGAAATGGGACGACAAGGTGG  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1455  CGTGACCACTCAGTACCAGGGCACCTGCCGCTGCAAGGCCACCATCTACCTGTGGAAATGGGACGACAAGGTGG  1528

Query 1925  TCATCTCTGACATCGACGGCACCATCACCAAGTCAGATGCTCTGGGCCATATCCTGCCCCAGCTGGGGAAAGAC  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1529  TCATCTCTGACATCGACGGCACCATCACCAAGTCAGATGCTCTGGGCCATATCCTGCCCCAGCTGGGGAAAGAC  1602

Query 1999  TGGACACACCAGGGCATCACCAGTCTCTATCACAAAATCCAACT------------------------------  2042
            ||||||||||||||||||||||||||||||||||||||||||||                              
Sbjct 1603  TGGACACACCAGGGCATCACCAGTCTCTATCACAAAATCCAACTGATCAGGGCCCACCTACTGGCCTGCAGCCG  1676

Query 2043  --------------------------------------------------------------------------  2042
                                                                                      
Sbjct 1677  GAGGGGAGGCCCTCTCCATCCTGGTCCACCCAGGCCTCAGGACTCTGTGCACCGTCCAGCTGAGTCCACTGCCT  1750

Query 2043  --------------------------------------------------------------------------  2042
                                                                                      
Sbjct 1751  GGCCGTTCTCTTCAAGTCCCCTCCCTGCAAAGGTTGGAACATCAGAGTCCCACAGTTGGGCTGGGCAGGCTAAA  1824

Query 2043  -------------------------------------------------------------------AAATGGG  2049
                                                                               |||||||
Sbjct 1825  GCCAGAGAAACAGATGGGGGCTGGCTGGTCTCTGATGGCTCTATGCCACCCTGTCCCCCACTCTCAGAAATGGG  1898

Query 2050  TACAAGTTCCTGTACTGCTCGGCGCGGGCCATTGGCATGGCGGACCTCACCAAGGGGTACCTGCAGTGGGTGAG  2123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct 1899  TACAAGTTCCTGTACTGCTCGGCGCGGGCCATTGGCATGGCGGACCTCACCAAGGGGTACCTGCAGTG------  1966

Query 2124  CGAGGGGGGCTGTAGCCTCCCCAAGGGCCCCATCCTTCTGTCTCCCAGCAGCCTCTTCTCTGCCCTCCACAGAG  2197
                                                                                   |||
Sbjct 1967  -----------------------------------------------------------------------GAG  1969

Query 2198  AGGTGATCGAGAAGAAACCAGAGGTGTTCAAGGTCGCCTGCCTGAGTGACATCCAGCAGCTGTTTCTGCCCCAC  2271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1970  AGGTGATCGAGAAGAAACCAGAGGTGTTCAAGGTCGCCTGCCTGAGTGACATCCAGCAGCTGTTTCTGCCCCAC  2043

Query 2272  GGACAGCCCTTCTATGCTGCCTTTGGGAATAGGCCCAATGATGTCTTTGCCTACCGGCAGGTGGGCCTGCCTGA  2345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2044  GGACAGCCCTTCTATGCTGCCTTTGGGAATAGGCCCAATGATGTCTTTGCCTACCGGCAGGTGGGCCTGCCTGA  2117

Query 2346  GTCACGCATCTTCACAGTCAACCCCCGGGGAGAGCTCATCCAGGAGCTCATAAAGAACCACAAATCCACGTATG  2419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2118  GTCACGCATCTTCACAGTCAACCCCCGGGGAGAGCTCATCCAGGAGCTCATAAAGAACCACAAATCCACGTATG  2191

Query 2420  AGCGGCTTGGTGAAGTGGTCGAGCTCCTCTTCCCACCTGTGGCCCGTGGCCCCAGCACAGACCTGGCCAACCCT  2493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2192  AGCGGCTTGGTGAAGTGGTCGAGCTCCTCTTCCCACCTGTGGCCCGTGGCCCCAGCACAGACCTGGCCAACCCT  2265

Query 2494  GAATACAGTAACTTCTGCTACTGGCGGGAGCCACTGCCTGCTGTGGACCTTGATACCCTGGAC  2556
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2266  GAATACAGTAACTTCTGCTACTGGCGGGAGCCACTGCCTGCTGTGGACCTTGATACCCTGGAC  2328

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