Nucleotide Global Alignment

Description

Query:
TRCN0000479685
Subject:
XM_011529005.2
Aligned Length:
2557
Identities:
2069
Gaps:
482

Alignment

Query    1  ATGAACTACGTGGGGCAGCTGGCGGAGACGGTGTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTGAACCCAGC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAACTACGTGGGGCAGCTGGCGGAGACGGTGTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTGAACCCAGC  74

Query   75  CACACTGAGCGGCGGCATTGACGTGCTGGTGGTGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACCCTTCCACG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CACACTGAGCGGCGGCATTGACGTGCTGGTGGTGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACCCTTCCACG  148

Query  149  TGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCGCGGGAGAAGGTGGTAGACATTGAGCTCAATGGGGAGCCTGTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCGCGGGAGAAGGTGGTAGACATTGAGCTCAATGGGGAGCCTGTG  222

Query  223  GACTTGCACATGAAGCTTGGGGACAGCGGGGAGGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGATGAACATGT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GACTTGCACATGAAGCTTGGGGACAGCGGGGAGGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGATGAACATGT  296

Query  297  GCCTCCCGGCCTGTGCACCTCACCCATCCCTTGGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCAGCTGGGCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCTCCCGGCCTGTGCACCTCACCCATCCCTTGGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCAGCTGGGCA  370

Query  371  CTGCCAGTGAGCCTGAGGGCCTCGTCATGGCAGGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTCGCAGGAGG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTGCCAGTGAGCCTGAGGGCCTCGTCATGGCAGGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTCGCAGGAGG  444

Query  445  AAACCCAAGCAGAAAGAGGATGCAGTGGCAACTGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCTGAGAGTGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAACCCAAGCAGAAAGAGGATGCAGTGGCAACTGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCTGAGAGTGA  518

Query  519  GCTATCCCTGCCGGAAAAGCTGAGGCCAGAGCCCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTCACTGCAGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTATCCCTGCCGGAAAAGCTGAGGCCAGAGCCCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTCACTGCAGC  592

Query  593  CCAAAGACATCTACCCCTACTCGGATGGCGAGTGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGCTAACATCC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCAAAGACATCTACCCCTACTCGGATGGCGAGTGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGCTAACATCC  666

Query  667  CCTAAGAGCGACTCGGAGCTGGAGGTGCGGACCCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCACATGCAGTG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCTAAGAGCGACTCGGAGCTGGAGGTGCGGACCCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCACATGCAGTG  740

Query  741  GGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAGCTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGGCAGAGCTG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAGCTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGGCAGAGCTG  814

Query  815  GGGCAACCTCTCCTCCTCGGGGAGGACCCAGCACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACCCTTTGGGA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GGGCAACCTCTCCTCCTCGGGGAGGACCCAGCACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACCCTTTGGGA  888

Query  889  CTCCCAATCCAGCAAACAGAGGCTGGTGCCGACCTTCAGCCTGACACAGAGGATCCCACTCTAGTGGGTCCCCC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTCCCAATCCAGCAAACAGAGGCTGGTGCCGACCTTCAGCCTGACACAGAGGATCCCACTCTAGTGGGTCCCCC  962

Query  963  TCTCCACACCCCAGAGACAGAGGAAAGCAAGACTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGCCTCCAAGT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCTCCACACCCCAGAGACAGAGGAAAGCAAGACTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGCCTCCAAGT  1036

Query 1037  CATGGAGCTGGGCCACTCTGGAGGTTCCAGTTCCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGAAAGGCTCC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CATGGAGCTGGGCCACTCTGGAGGTTCCAGTTCCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGAAAGGCTCC  1110

Query 1111  CCAAAGAGAAGCCAGCACCTGGGCCCCAGTGACATCTACCTGGATGACTTGCCCTCCCTGGACTCTGAGAATGC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCAAAGAGAAGCCAGCACCTGGGCCCCAGTGACATCTACCTGGATGACTTGCCCTCCCTGGACTCTGAGAATGC  1184

Query 1185  AGCGCTTTACTTCCCCCAAAGTGACTCTGGGCTGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCAGAAGTCCC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGCGCTTTACTTCCCCCAAAGTGACTCTGGGCTGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCAGAAGTCCC  1258

Query 1259  TGAGGGACCCCAACCCTGAACATGAACCTGAACCCACTCTGGACACAGTGGATACAATAGCACTGTCCCTCTGT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGAGGGACCCCAACCCTGAACATGAACCTGAACCCACTCTGGACACAGTGGATACAATAGCACTGTCCCTCTGT  1332

Query 1333  GGTGGACTGGCTGACAGCCGGGACATCTCCCTAGAGAAATTCAACCAGCACAGCGTCTCTTACCAGGACCTCAC  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GGTGGACTGGCTGACAGCCGGGACATCTCCCTAGAGAAATTCAACCAGCACAGCGTCTCTTACCAGGACCTCAC  1406

Query 1407  CAAAAACCCCGGACTTTTGGATGACCCAAACCTAGTGGTGAAAATCAATGGAAAGCATTATAACTGGGCTGTGG  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CAAAAACCCCGGACTTTTGGATGACCCAAACCTAGTGGTGAAAATCAATGGAAAGCATTATAACTGGGCTGTGG  1480

Query 1481  CTGCCCCCATGATCCTCTCCCTGCAAGCCTTCCAGAAAAACTTGCCCAAGAGCACCATGGACAAGCTGGAGAGG  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CTGCCCCCATGATCCTCTCCCTGCAAGCCTTCCAGAAAAACTTGCCCAAGAGCACCATGGACAAGCTGGAGAGG  1554

Query 1555  GAGAAGATGCCCCGGAAGGGTGGGCGATGGTGGTTTTCCTGGCGACGCAGGGACTTCCTGGCCGAGGAGCGCAG  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GAGAAGATGCCCCGGAAGGGTGGGCGATGGTGGTTTTCCTGGCGACGCAGGGACTTCCTGGCCGAGGAGCGCAG  1628

Query 1629  TGCCCAGAAGGAGAAGACTGCAGCCAAGGAGCAGCAGGGGGAGAAGACAGAAGTCCTGAGCAGTGATGACGATG  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TGCCCAGAAGGAGAAGACTGCAGCCAAGGAGCAGCAGGGGGAGAAGACAGAAGTCCTGAGCAGTGATGACGATG  1702

Query 1703  CCCCAGACAGCCCTGTGATCCTGGAGATCCCCTCCTTGCCACCCTCCACTCCACCCTCCACTCCTACCTACAAG  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CCCCAGACAGCCCTGTGATCCTGGAGATCCCCTCCTTGCCACCCTCCACTCCACCCTCCACTCCTACCTACAAG  1776

Query 1777  AAGTCCCTCCGCCTCTCCTCCGATCAGATCCGGCGCCTGAACCTGCAAGAAGGTGCCAATGATGTGGTCTTCAG  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AAGTCCCTCCGCCTCTCCTCCGATCAGATCCGGCGCCTGAACCTGCAAGAAGGTGCCAATGATGTGGTCTTCAG  1850

Query 1851  CGTGACCACTCAGTACCAGGGCACCTGCCGCTGCAAGGCCACCATCTACCTGTGGAAATGGGACGACAAGGTGG  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CGTGACCACTCAGTACCAGGGCACCTGCCGCTGCAAGGCCACCATCTACCTGTGGAAATGGGACGACAAGGTGG  1924

Query 1925  TCATCTCTGACATCGACGGCACCATCACCAAGTCAGATGCTCTGGGCCATATCCTGCCCCAGCTGGGGAAAGAC  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  TCATCTCTGACATCGACGGCACCATCACCAAGTCAGATGCTCTGGGCCATATCCTGCCCCAGCTGGGGAAAGAC  1998

Query 1999  TGGACACACCAGGGCATCACCAGTCTCTATCACAAAATCCAACTAAATGGGTACAAGTTCCTGTACTGCTCGGC  2072
            ||||||||||||||||||||||||||||||||||||||||||||             |||              
Sbjct 1999  TGGACACACCAGGGCATCACCAGTCTCTATCACAAAATCCAACT-------------TTC--------------  2045

Query 2073  GCGGGCCATTGGCATGGCGGACCTCA-CCAAGGGGTACCTGCAGTGGGTGAGCGAGGGGGGCTGTAGCCTCCCC  2145
                    |.||.|.||     |||| ||        |||                 ||||||||...|     
Sbjct 2046  --------TGGGAAAGG-----CTCATCC--------CCT-----------------GGGGCTGTGTTC-----  2076

Query 2146  AAGGGCCCCATCCTTCTGTCTCCCAGCAGCCTCTTCTCTGCCCTCCACAGAGAGGTGATCGAGAAGAAACCAGA  2219
                                                                                      
Sbjct 2077  --------------------------------------------------------------------------  2076

Query 2220  GGTGTTCAAGGTCGCCTGCCTGAGTGACATCCAGCAGCTGTTTCTGCCCCACGGACAGCCCTTCTATGCTGCCT  2293
                                                                                      
Sbjct 2077  --------------------------------------------------------------------------  2076

Query 2294  TTGGGAATAGGCCCAATGATGTCTTTGCCTACCGGCAGGTGGGCCTGCCTGAGTCACGCATCTTCACAGTCAAC  2367
                                                                                      
Sbjct 2077  --------------------------------------------------------------------------  2076

Query 2368  CCCCGGGGAGAGCTCATCCAGGAGCTCATAAAGAACCACAAATCCACGTATGAGCGGCTTGGTGAAGTGGTCGA  2441
                                                                                      
Sbjct 2077  --------------------------------------------------------------------------  2076

Query 2442  GCTCCTCTTCCCACCTGTGGCCCGTGGCCCCAGCACAGACCTGGCCAACCCTGAATACAGTAACTTCTGCTACT  2515
                                                                                      
Sbjct 2077  --------------------------------------------------------------------------  2076

Query 2516  GGCGGGAGCCACTGCCTGCTGTGGACCTTGATACCCTGGAC  2556
                                                     
Sbjct 2077  -----------------------------------------  2076

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