Nucleotide Global Alignment

Description

Query:
TRCN0000479685
Subject:
XR_001754379.1
Aligned Length:
3096
Identities:
2556
Gaps:
540

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGAAGGAGTGGAGCCGTGCTCTCACCCTGTCTTAGAGGACCCGGAAGCGCCAAGTGACTGAGGGCCGAAGACAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCACCTGTGGAGCCTGTGCACGTAGGTAGAGGCGGCGGCTCTGAGTCCAGGAGCTCCAGTGGGCAGCTCCCCAG  148

Query    1  --------ATGAACTACGTGGGGCAGCTGGCGGAGACGGTGTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTG  66
                    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CACCAGCCATGAACTACGTGGGGCAGCTGGCGGAGACGGTGTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTG  222

Query   67  AACCCAGCCACACTGAGCGGCGGCATTGACGTGCTGGTGGTGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACC  140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AACCCAGCCACACTGAGCGGCGGCATTGACGTGCTGGTGGTGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACC  296

Query  141  CTTCCACGTGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCGCGGGAGAAGGTGGTAGACATTGAGCTCAATGGGG  214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTTCCACGTGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCGCGGGAGAAGGTGGTAGACATTGAGCTCAATGGGG  370

Query  215  AGCCTGTGGACTTGCACATGAAGCTTGGGGACAGCGGGGAGGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGAT  288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGCCTGTGGACTTGCACATGAAGCTTGGGGACAGCGGGGAGGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGAT  444

Query  289  GAACATGTGCCTCCCGGCCTGTGCACCTCACCCATCCCTTGGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCA  362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAACATGTGCCTCCCGGCCTGTGCACCTCACCCATCCCTTGGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCA  518

Query  363  GCTGGGCACTGCCAGTGAGCCTGAGGGCCTCGTCATGGCAGGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTC  436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTGGGCACTGCCAGTGAGCCTGAGGGCCTCGTCATGGCAGGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTC  592

Query  437  GCAGGAGGAAACCCAAGCAGAAAGAGGATGCAGTGGCAACTGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCT  510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GCAGGAGGAAACCCAAGCAGAAAGAGGATGCAGTGGCAACTGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCT  666

Query  511  GAGAGTGAGCTATCCCTGCCGGAAAAGCTGAGGCCAGAGCCCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTC  584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGAGTGAGCTATCCCTGCCGGAAAAGCTGAGGCCAGAGCCCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTC  740

Query  585  ACTGCAGCCCAAAGACATCTACCCCTACTCGGATGGCGAGTGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGC  658
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACTGCAGCCCAAAGACATCTACCCCTACTCGGATGGCGAGTGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGC  814

Query  659  TAACATCCCCTAAGAGCGACTCGGAGCTGGAGGTGCGGACCCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCAC  732
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TAACATCCCCTAAGAGCGACTCGGAGCTGGAGGTGCGGACCCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCAC  888

Query  733  ATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAGCTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGG  806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAGCTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGG  962

Query  807  CAGAGCTGGGGCAACCTCTCCTCCTCGGGGAGGACCCAGCACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACC  880
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CAGAGCTGGGGCAACCTCTCCTCCTCGGGGAGGACCCAGCACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACC  1036

Query  881  CTTTGGGACTCCCAATCCAGCAAACAGAGGCTGGTGCCGACCTTCAGCCTGACACAGAGGATCCCACTCTAGTG  954
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTTTGGGACTCCCAATCCAGCAAACAGAGGCTGGTGCCGACCTTCAGCCTGACACAGAGGATCCCACTCTAGTG  1110

Query  955  GGTCCCCCTCTCCACACCCCAGAGACAGAGGAAAGCAAGACTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGC  1028
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GGTCCCCCTCTCCACACCCCAGAGACAGAGGAAAGCAAGACTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGC  1184

Query 1029  CTCCAAGTCATGGAGCTGGGCCACTCTGGAGGTTCCAGTTCCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGA  1102
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CTCCAAGTCATGGAGCTGGGCCACTCTGGAGGTTCCAGTTCCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGA  1258

Query 1103  AAGGCTCCCCAAAGAGAAGCCAGCACCTGGGCCCCAGTGACATCTACCTGGATGACTTGCCCTCCCTGGACTCT  1176
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AAGGCTCCCCAAAGAGAAGCCAGCACCTGGGCCCCAGTGACATCTACCTGGATGACTTGCCCTCCCTGGACTCT  1332

Query 1177  GAGAATGCAGCGCTTTACTTCCCCCAAAGTGACTCTGGGCTGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCA  1250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GAGAATGCAGCGCTTTACTTCCCCCAAAGTGACTCTGGGCTGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCA  1406

Query 1251  GAAGTCCCTGAGGGACCCCAACCCTGAACATGAACCTGAACCCACTCTGGACACAGTGGATACAATAGCACTGT  1324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GAAGTCCCTGAGGGACCCCAACCCTGAACATGAACCTGAACCCACTCTGGACACAGTGGATACAATAGCACTGT  1480

Query 1325  CCCTCTGTGGTGGACTGGCTGACAGCCGGGACATCTCCCTAGAGAAATTCAACCAGCACAGCGTCTCTTACCAG  1398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CCCTCTGTGGTGGACTGGCTGACAGCCGGGACATCTCCCTAGAGAAATTCAACCAGCACAGCGTCTCTTACCAG  1554

Query 1399  GACCTCACCAAAAACCCCGGACTTTTGGATGACCCAAACCTAGTGGTGAAAATCAATGGAAAGCATTATAACTG  1472
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GACCTCACCAAAAACCCCGGACTTTTGGATGACCCAAACCTAGTGGTGAAAATCAATGGAAAGCATTATAACTG  1628

Query 1473  GGCTGTGGCTGCCCCCATGATCCTCTCCCTGCAAGCCTTCCAGAAAAACTTGCCCAAGAGCACCATGGACAAGC  1546
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GGCTGTGGCTGCCCCCATGATCCTCTCCCTGCAAGCCTTCCAGAAAAACTTGCCCAAGAGCACCATGGACAAGC  1702

Query 1547  TGGAGAGGGAGAAGATGCCCCGGAAGGGTGGGCGATGGTGGTTTTCCTGGCGACGCAGGGACTTCCTGGCCGAG  1620
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TGGAGAGGGAGAAGATGCCCCGGAAGGGTGGGCGATGGTGGTTTTCCTGGCGACGCAGGGACTTCCTGGCCGAG  1776

Query 1621  GAGCGCAGTGCCCAGAAGGAGAAGACTGCAGCCAAGGAGCAGCAGGGGGAGAAGACAGAAGTCCTGAGCAGTGA  1694
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GAGCGCAGTGCCCAGAAGGAGAAGACTGCAGCCAAGGAGCAGCAGGGGGAGAAGACAGAAGTCCTGAGCAGTGA  1850

Query 1695  TGACGATGCCCCAGACAGCCCTGTGATCCTGGAGATCCCCTCCTTGCCACCCTCCACTCCACCCTCCACTCCTA  1768
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  TGACGATGCCCCAGACAGCCCTGTGATCCTGGAGATCCCCTCCTTGCCACCCTCCACTCCACCCTCCACTCCTA  1924

Query 1769  CCTACAAGAAGTCCCTCCGCCTCTCCTCCGATCAGATCCGGCGCCTGAACCTGCAAGAAGGTGCCAATGATGTG  1842
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CCTACAAGAAGTCCCTCCGCCTCTCCTCCGATCAGATCCGGCGCCTGAACCTGCAAGAAGGTGCCAATGATGTG  1998

Query 1843  GTCTTCAGCGTGACCACTCAGTACCAGGGCACCTGCCGCTGCAAGGCCACCATCTACCTGTGGAAATGGGACGA  1916
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  GTCTTCAGCGTGACCACTCAGTACCAGGGCACCTGCCGCTGCAAGGCCACCATCTACCTGTGGAAATGGGACGA  2072

Query 1917  CAAGGTGGTCATCTCTGACATCGACGGCACCATCACCAAGTCAGATGCTCTGGGCCATATCCTGCCCCAGCTGG  1990
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  CAAGGTGGTCATCTCTGACATCGACGGCACCATCACCAAGTCAGATGCTCTGGGCCATATCCTGCCCCAGCTGG  2146

Query 1991  GGAAAGACTGGACACACCAGGGCATCACCAGTCTCTATCACAAAATCCAACT----------------------  2042
            ||||||||||||||||||||||||||||||||||||||||||||||||||||                      
Sbjct 2147  GGAAAGACTGGACACACCAGGGCATCACCAGTCTCTATCACAAAATCCAACTGATCAGGGCCCACCTACTGGCC  2220

Query 2043  --------------------------------------------------------------------------  2042
                                                                                      
Sbjct 2221  TGCAGCCGGAGGGGAGGCCCTCTCCATCCTGGTCCACCCAGGCCTCAGGACTCTGTGCACCGTCCAGCTGAGTC  2294

Query 2043  --------------------------------------------------------------------------  2042
                                                                                      
Sbjct 2295  CACTGCCTGGCCGTTCTCTTCAAGTCCCCTCCCTGCAAAGGTTGGAACATCAGAGTCCCACAGTTGGGCTGGGC  2368

Query 2043  --------------------------------------------------------------------------  2042
                                                                                      
Sbjct 2369  AGGCTAAAGCCAGAGAAACAGATGGGGGCTGGCTGGTCTCTGATGGCTCTATGCCACCCTGTCCCCCACTCTCA  2442

Query 2043  -AAATGGGTACAAGTTCCTGTACTGCTCGGCGCGGGCCATTGGCATGGCGGACCTCACCAAGGGGTACCTGCAG  2115
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  GAAATGGGTACAAGTTCCTGTACTGCTCGGCGCGGGCCATTGGCATGGCGGACCTCACCAAGGGGTACCTGCAG  2516

Query 2116  TGGGTGAGCGAGGGGGGCTGTAGCCTCCCCAAGGGCCCCATCCTTCTGTCTCCCAGCAGCCTCTTCTCTGCCCT  2189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  TGGGTGAGCGAGGGGGGCTGTAGCCTCCCCAAGGGCCCCATCCTTCTGTCTCCCAGCAGCCTCTTCTCTGCCCT  2590

Query 2190  CCACAGAGAGGTGATCGAGAAGAAACCAGAGGTGTTCAAGGTCGCCTGCCTGAGTGACATCCAGCAGCTGTTTC  2263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  CCACAGAGAGGTGATCGAGAAGAAACCAGAGGTGTTCAAGGTCGCCTGCCTGAGTGACATCCAGCAGCTGTTTC  2664

Query 2264  TGCCCCACGGACAGCCCTTCTATGCTGCCTTTGGGAATAGGCCCAATGATGTCTTTGCCTACCGGCAGGTGGGC  2337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  TGCCCCACGGACAGCCCTTCTATGCTGCCTTTGGGAATAGGCCCAATGATGTCTTTGCCTACCGGCAGGTGGGC  2738

Query 2338  CTGCCTGAGTCACGCATCTTCACAGTCAACCCCCGGGGAGAGCTCATCCAGGAGCTCATAAAGAACCACAAATC  2411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739  CTGCCTGAGTCACGCATCTTCACAGTCAACCCCCGGGGAGAGCTCATCCAGGAGCTCATAAAGAACCACAAATC  2812

Query 2412  CACGTATGAGCGGCTTGGTGAAGTGGTCGAGCTCCTCTTCCCACCTGTGGCCCGTGGCCCCAGCACAGACCTGG  2485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813  CACGTATGAGCGGCTTGGTGAAGTGGTCGAGCTCCTCTTCCCACCTGTGGCCCGTGGCCCCAGCACAGACCTGG  2886

Query 2486  CCAACCCTGAATACAGTAACTTCTGCTACTGGCGGGAGCCACTGCCTGCTGTGGACCTTGATACCCTGGAC---  2556
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct 2887  CCAACCCTGAATACAGTAACTTCTGCTACTGGCGGGAGCCACTGCCTGCTGTGGACCTTGATACCCTGGACTGA  2960

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 2961  ACCTGCCCTGGCTGGCTCCTCCTCCCTGGCCCGGCCCAGGACTGGCTAGGTGTCCTGGGGTATAGGAGGGTGGG  3034

Query 2557  --------------------------------------------------------------  2556
                                                                          
Sbjct 3035  AATTGGAGTGTCATGGGGCAAACCCACTGAAGGGGAAGGAGGAGGCTGCAGGTTGGTTGGCA  3096

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