Nucleotide Global Alignment

Description

Query:
TRCN0000479707
Subject:
NM_001170536.2
Aligned Length:
1811
Identities:
1444
Gaps:
295

Alignment

Query    1  ATGCAGCTGGAAGCCCTGAACCTGCTGCACACACTAGTCTGGGCACGGAGTCTCTGCCGTGCCGGAGCTGTGCA  74
                                                                      .|||.|||     |||
Sbjct    1  ----------------------------------------------------------ATGCAGGA-----GCA  11

Query   75  GACACAGGAGCGGCTGTCAGGCAGTGCCAGCCCT-GAGCA--AGTGCCAGCTGGTGAGTGCTGTGCTCTGC-AG  144
            |||         |||     |||||        | |||||  |||.|.||||                  | |.
Sbjct   12  GAC---------GCT-----GCAGT--------TGGAGCAACAGTCCAAGCT------------------CAAA  45

Query  145  GAGTATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCT  218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   46  GAGTATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCT  119

Query  219  GAGCGAGGAGACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACC  292
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  120  GAGCGAGGAGACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACC  193

Query  293  AACTGAAGCAGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCC  366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  194  AACTGAAGCAGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCC  267

Query  367  ATGCGGCGAGCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGACCGAGGC  440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  268  ATGCGGCGAGCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGGCCGAGGC  341

Query  441  CCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGTCCGAGC  514
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  342  CCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGGCCGAGC  415

Query  515  ACCGTCAGACCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACA  588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  416  ACCGTCAGACCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACA  489

Query  589  GACCGGGACAAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGC  662
            |||.||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  490  GACTGGGACAAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTTGGGGTCTACTCAGCCAAGAATGC  563

Query  663  GACAGC-CGTCACTGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATC  735
            .|| || .|||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  564  CAC-GCTTGTCGCCGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATC  636

Query  736  ACGGTGCTGGAGGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGA  809
            ||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  637  ACGGTGCTTGAGGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGCGCTGGA  710

Query  810  GGGTGTTGTGCTTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACCAGGAACACCAAGAAGA  883
            ||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  711  GGGTGTTGTGCTCAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACAAGGAACACCAAGAAGA  784

Query  884  ACCGGGGCCTGTACAGGCACATCCTGCTGTATGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTC  957
            ||||..|||||||||||.||||||||.||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  785  ACCGCAGCCTGTACAGGAACATCCTGATGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTC  858

Query  958  GCCCTGCACTCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGAC  1031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  859  GCCCTGCACTCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGAC  932

Query 1032  CGCCATGCACAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTCATGGATGAAGCAGACG  1105
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||||||||.||||
Sbjct  933  CGCCATGCACAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGGACG  1006

Query 1106  CCTTCCTTCGGAAGCGAGCCACTGAGGAGATAAGCAAGGACCTCAGAGCCACACTGAACGCCTTCCTGTACCAC  1179
            ||||||||||||||||||||||.|||.||||||||.||||||||||.|||||||||||||||||||||||||.|
Sbjct 1007  CCTTCCTTCGGAAGCGAGCCACCGAGAAGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCCTGTACCGC  1080

Query 1180  ATGGGCCAACACAGCAACAAATTCATGCTGGTCCTGGCCAGCAATCTGCCTGAGCAGTTCGACTGTGCCATCAA  1253
            |.||||||.|||||||||||.|||||||||||||||||||||||.|..||.||||||||||||||.||||||||
Sbjct 1081  ACGGGCCAGCACAGCAACAAGTTCATGCTGGTCCTGGCCAGCAACCAACCAGAGCAGTTCGACTGGGCCATCAA  1154

Query 1254  CAGCCGCATTGACGTGATGGTCCACTTCGACCTGCCGCAGCAGGAGGAGCGGGAGCGCCTGGTGAGACTGCATT  1327
            ...||||||..|.|.|||||||||||||||||||||...|||||||||.||||||||||||||||||.||.|||
Sbjct 1155  TGACCGCATCAATGAGATGGTCCACTTCGACCTGCCAGGGCAGGAGGAACGGGAGCGCCTGGTGAGAATGTATT  1228

Query 1328  TTGACAACTGTGTTCTTAAGCCGGCCACAGAAGGAAAACGGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGG  1401
            |||||||.|.|||||||||||||||||||||||||||.|.||||||||||||||||||||||||||||||||||
Sbjct 1229  TTGACAAGTATGTTCTTAAGCCGGCCACAGAAGGAAAGCAGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGG  1302

Query 1402  AAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCA  1475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1303  AAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCA  1376

Query 1476  GGCCACGGCATATGCCTCCAAGGACGGGGTCCTCACTGAGGCCATGATGGACGCCTGTGTGCAAGATGCTGTCC  1549
            |||||||||.|||||||||.|||||||||||||.||.|||||||||||||||.||.|.||||||||||||||||
Sbjct 1377  GGCCACGGCGTATGCCTCCGAGGACGGGGTCCTGACCGAGGCCATGATGGACACCCGCGTGCAAGATGCTGTCC  1450

Query 1550  AGCAGTACCGACAGAAGATGCGCTGGCTGAAGGCGGAGGGGCCTGGGCGCGGGGTCGAGCACCCCCTATCCGGA  1623
            |||||.|||..|||||||||.||||||||||||||||.|||||||||||.||||.|||||.|.|||.||||   
Sbjct 1451  AGCAGCACCAGCAGAAGATGTGCTGGCTGAAGGCGGAAGGGCCTGGGCGTGGGGACGAGCCCTCCCCATCC---  1521

Query 1624  GTCCAAGGCGAGACCCTCACCTCATGGAGCCTGGCCACGGACCCCTCCTACCCCTGCCTTGCCGGCCCCTGCAC  1697
                                                                                      
Sbjct 1522  --------------------------------------------------------------------------  1521

Query 1698  ATTTAGGATATGCTCCTGGATGGGGACTGGGCTGTGCCCAGGGCCTCTGTCCCCCAGGATGTCTTGTGGTGGCG  1771
                                                                                      
Sbjct 1522  --------------------------------------------------------------------------  1521

Query 1772  GTCGGCCGTTCTGCCCCCCAGGGCACCCCCTGTTG  1806
                                               
Sbjct 1522  -----------------------------------  1521

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