Nucleotide Global Alignment

Description

Query:
TRCN0000479746
Subject:
NR_161421.1
Aligned Length:
2160
Identities:
1641
Gaps:
519

Alignment

Query    1  ----------------------------------------ATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGC  34
                                                    ||||||||||||||||||||||||||||||||||
Sbjct    1  AGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGAAACATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGC  74

Query   35  TCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGGTCTAC  108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGGTCTAC  148

Query  109  ATCCTGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCACAGTGAGCATGTTTTTGAACACATTAACACCGAA  182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATCCTGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCACAGTGAGCATGTTTTTGAACACATTAACACCGAA  222

Query  183  GTTCTACGTGGCCCTAACAGGCACTTCCTCACTAATATCAGGGCTTATTTTGATATTTGAATGGTGGTATTTTC  256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTTCTACGTGGCCCTAACAGGCACTTCCTCACTAATATCAGGGCTTATTTTGATATTTGAATGGTGGTATTTTC  296

Query  257  GCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTGACAAC  330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTGACAAC  370

Query  331  AACTCTTCCAACA---------------------ACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGCAAAGT  383
            |||||||||||||                     ||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGCAAAGT  444

Query  384  ATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGAGCCTC  457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGAGCCTC  518

Query  458  TTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGT  531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGT  592

Query  532  CCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGC  605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGC  666

Query  606  CTTGGAGATAAATGAGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAGCAG  679
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTTGGAGATAAATGAGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAGCAG  740

Query  680  AAAAATTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGA  753
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAAAATTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGA  814

Query  754  TCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAATGTGTGC  827
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAATGTGTGC  888

Query  828  CAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGATTTAATGAAGGAGTTCCCCCTTCTGAGTA  901
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGATTTAATGAAGGAGTTCCCCCTTCTGAGTA  962

Query  902  TGTTCAATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGGCAGTCTTA  975
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGTTCAATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGGCAGTCTTA  1036

Query  976  GCAAAGTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAAGCAAGAGC  1049
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCAAAGTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAAGCAAGAGC  1110

Query 1050  TGTCTCTGACAA--------------------------------------------------------------  1061
            ||||||||||||                                                              
Sbjct 1111  TGTCTCTGACAAATCGCCAGTACCTACTGCAACATCTTTTCTCCCTACACAGCGACTCCAGCTTGGGAGGGCAG  1184

Query 1062  --------------------------------------------------------------------------  1061
                                                                                      
Sbjct 1185  GGCCAGGGTTGTCACAGCTTCCCCTGTGGTGTCTGCCTGCCAAGCACAGCTCTGGAGTTAGCCCTGGGTGTGAG  1258

Query 1062  ATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTAGAGGCCATTCATAGAG  1135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTAGAGGCCATTCATAGAG  1332

Query 1136  CTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGAAAAGCTTAATCCTACCCCCAGAACATATC  1209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGAAAAGCTTAATCCTACCCCCAGAACATATC  1406

Query 1210  CTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCATCTTGCACACTGGAAGAGAGTGGAAGGGGC  1283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCATCTTGCACACTGGAAGAGAGTGGAAGGGGC  1480

Query 1284  TTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGATCCCTTATCCCTTGGAAAAGGGGCACCTAT  1357
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGATCCCTTATCCCTTGGAAAAGGGGCACCTAT  1554

Query 1358  TTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTCTCAGTTTAC  1431
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTCTCAGTTTAC  1628

Query 1432  CCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTATGTTCCTTCACAGCCATGCTGGCCCTCCT  1505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTATGTTCCTTCACAGCCATGCTGGCCCTCCT  1702

Query 1506  GACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGCACTTTGTTTGCCCCCTTAAACT  1579
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGCACTTTGTTTGCCCCCTTAAACT  1776

Query 1580  TTGTCATGGAGAAAGTGGAGAGCATCCTCCCATCCAGTCTGTGGCACCAGCTAACACGGATC------------  1641
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct 1777  TTGTCATGGAGAAAGTGGAGAGCATCCTCCCATCCAGTCTGTGGCACCAGCTAACACGGATCTGAGAGAAGCCC  1850

Query 1642  --------------------------------------------------------------------------  1641
                                                                                      
Sbjct 1851  TGTCCTCCACTCACCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCAT  1924

Query 1642  --------------------------------------------------------------------------  1641
                                                                                      
Sbjct 1925  GACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAAATGTTCATGGACTATTCCATATTAAAAGCTGTTTTTGT  1998

Query 1642  --------------------------------------------------------------------------  1641
                                                                                      
Sbjct 1999  TGTACAAAATTCACTGATGTTCAGTTCTATTTTATTTTGCCTTCAGAAAAGAAGAAAGTCAAAAATAAAACTTT  2072

Query 1642  --------------------------------------------------------------------------  1641
                                                                                      
Sbjct 2073  TGTGTATTACAGCAATCATTTGTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGATGTCCCAAATAAACCTT  2146

Query 1642  --------------  1641
                          
Sbjct 2147  TGGATTTACCTTGA  2160

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