Nucleotide Global Alignment

Description

Query:
TRCN0000479793
Subject:
XM_011511969.2
Aligned Length:
1438
Identities:
381
Gaps:
1040

Alignment

Query    1  ATGGACTTCAGCAGAAATCTTTATGATATTGGGGAACAACTGGACAGTGAAGATCTGGCCTCCCTCAAGTTCCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAGCCTGGACTACATTCCGCAAAGGAAGCAAGAACCCATCAAGGATGCCTTGATGTTATTCCAGAGACTCCAGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AAAAGAGAATGTTGGAGGAAAGCAATCTGTCCTTCCTGAAGGAGCTGCTCTTCCGAATTAATAGACTGGATTTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CTGATTACCTACCTAAACACTAGAAAGGAGGAGATGGAAAGGGAACTTCAGACACCAGGCAGGGCTCAAATTTC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TGCCTACAGGGTCATGCTCTATCAGATTTCAGAAGAAGTGAGCAGATCAGAATTGAGGTCTTTTAAGTTTCTTT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TGCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGATATTTTCATAGAGATGGAGAAG  444
                                                                             |||||||||
Sbjct    1  -----------------------------------------------------------------ATGGAGAAG  9

Query  445  AGGGTCATCCTGGGAGAAGGAAAGTTGGACATCCTGAAAAGAGTCTGTGCCCAAATCAACAAGAGCCTGCTGAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   10  AGGGTCATCCTGGGAGAAGGAAAGTTGGACATCCTGAAAAGAGTCTGTGCCCAAATCAACAAGAGCCTGCTGAA  83

Query  519  GATAATCAACGACTATGAAGAATTCAGCAAA-------------------------------------------  549
            |||||||||||||||||||||||||||||||                                           
Sbjct   84  GATAATCAACGACTATGAAGAATTCAGCAAAGAGAGAAGCAGCAGCCTTGAAGGAAGTCCTGATGAATTTTCAA  157

Query  550  --GGGGAGGAGTTGTGTGGGGTAATGACAATCTCGGACTCTCCAAGAGAACAGGATAGTGAATCACAGACTTTG  621
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  158  ATGGGGAGGAGTTGTGTGGGGTAATGACAATCTCGGACTCTCCAAGAGAACAGGATAGTGAATCACAGACTTTG  231

Query  622  GACAAAGTTTACCAAATGAAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAATCACAATTTTGCAAAAGC  695
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  232  GACAAAGTTTACCAAATGAAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAATCACAATTTTGCAAAAGC  305

Query  696  ACGGGAGAAAGTGCCCAAACTTCACAGCATTAGGGACAGGAATGGAACACACTTGGATGCAGGGTCT-----CA  764
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||     ||
Sbjct  306  ACGGGAGAAAGTGCCCAAACTTCACAGCATTAGGGACAGGAATGGAACACACTTGGATGCAGGGGCTTTGACCA  379

Query  765  C---------------TC-TGTTG---------CCCAGGCTGGAGTG--CAGTGG----------TGTGATCT-  800
            |               || |.|||         ||||.|.| ||.||  ||||.|          ||.|||.| 
Sbjct  380  CGACCTTTGAAGAGCTTCATTTTGAGATCAAGCCCCACGAT-GACTGCACAGTAGAGCAAATCTATGAGATTTT  452

Query  801  ----------CGGCTC-------------------ACTGCAGCCTCCGC--------CTCCC-TGG---TTCGG  833
                      |..|||                   |||||..|.||.||        ||||| |||   ...||
Sbjct  453  GAAAATCTACCAACTCATGGACCACAGTAACATGGACTGCTTCATCTGCTGTATCCTCTCCCATGGAGACAAGG  526

Query  834  G-------------------------------------------------------------------------  834
            |                                                                         
Sbjct  527  GCATCATCTATGGCACTGATGGACAGGAGGCCCCCATCTATGAGCTGACATCTCAGTTCACTGGTTTGAAGTGC  600

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct  601  CCTTCCCTTGCTGGAAAACCCAAAGTGTTTTTTATTCAGGCTTGTCAGGGGGATAACTACCAGAAAGGTATACC  674

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct  675  TGTTGAGACTGATTCAGAGGAGCAACCCTATTTAGAAATGGATTTATCATCACCTCAAACGAGATATATCCCGG  748

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct  749  ATGAGGCTGACTTTCTGCTGGGGATGGCCACTGTGAATAACTGTGTTTCCTACCGAAACCCTGCAGAGGGAACC  822

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct  823  TGGTACATCCAGTCACTTTGCCAGAGCCTGAGAGAGCGATGTCCTCGAGGCGATGATATTCTCACCATCCTGAC  896

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct  897  TGAAGTGAACTATGAAGTAAGCAACAAGGATGACAAGAAAAACATGGGGAAACAGATGCCTCAGCCTACTTTCA  970

Query  835  --------------------------------  834
                                            
Sbjct  971  CACTAAGAAAAAAACTTGTCTTCCCTTCTGAT  1002

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