Nucleotide Global Alignment

Description

Query:
TRCN0000479860
Subject:
NM_003736.3
Aligned Length:
2839
Identities:
2066
Gaps:
455

Alignment

Query    1  ATGGGGAGCGGCGCCGGGGAGCTGGGCCGGGCTGAGAGGCTGCCAGTGCTCTTTCTCTTCCTGCTGTCTTTGTT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGGAGCGGCGCCGGGGAGCTGGGCCGGGCTGAGAGGCTGCCAGTGCTCTTTCTCTTCCTGCTGTCTTTGTT  74

Query   75  CTGCCCGGCGCTCTGTGAGCAGATCCGCTACAGGATTCCCGAGGAAATGCCCAAGGGCTCCGTAGTGGGGAACC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTGCCCGGCGCTCTGTGAGCAGATCCGCTACAGGATTCCCGAGGAAATGCCCAAGGGCTCCGTAGTGGGGAACC  148

Query  149  TCGCCACGGACCTGGGGTTCAGCGTCCAGGAGTTACCGACTCGAAAACTGCGCGTCAGTTCGGAGAAGCCTTAC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCGCCACGGACCTGGGGTTCAGCGTCCAGGAGTTACCGACTCGAAAACTGCGCGTCAGTTCGGAGAAGCCTTAC  222

Query  223  TTCACCGTGAGCGCAGAGAGCGGGGAGTTGCTTGTGAGCAGCAGGCTAGACAGGGAGGAGATATGCGGGAAGAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTCACCGTGAGCGCAGAGAGCGGGGAGTTGCTTGTGAGCAGCAGGCTAGACAGGGAGGAGATATGCGGGAAGAA  296

Query  297  GCCAGCTTGTGCTCTGGAATTTGAGGCTGTTGCTGAAAATCCACTGAACTTTTATCACGTGAATGTGGAGATCG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCAGCTTGTGCTCTGGAATTTGAGGCTGTTGCTGAAAATCCACTGAACTTTTATCACGTGAATGTGGAGATCG  370

Query  371  AGGACATTAATGACCACACGCCAAAATTCACGCAAAATTCCTTTGAGCTGCAAATAAGTGAGTCTGCACAGCCT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGACATTAATGACCACACGCCAAAATTCACGCAAAATTCCTTTGAGCTGCAAATAAGTGAGTCTGCACAGCCT  444

Query  445  GGCACAAGATTTATACTAGAAGTAGCAGAAGATGCAGATATTGGCTTA--AACTCTCTGCAGAAGTATAAACTC  516
            ||||||.||||||||.|||.|...||..|.|||||.||||||||  ||  |||.|.||||||||.||..|||||
Sbjct  445  GGCACACGATTTATATTAGGATCTGCCCATGATGCGGATATTGG--TAGCAACACACTGCAGAATTACCAACTC  516

Query  517  TCTCTTAACCCAAG------TTTCTCATTAATAATTAAGGAGAAA-CAGGATGGTAGTAAATACCCGGAACTGG  583
                  |..||.||      |||||||.|.||||.|||.|||||| || |||||.|||||||||||.||..|||
Sbjct  517  ------AGTCCCAGTGATCATTTCTCACTGATAAATAAAGAGAAATCA-GATGGCAGTAAATACCCTGAGATGG  583

Query  584  CACTGGAGAAAACCTTAGACCGGGAACAACAGA---GTTACCATCGTTTAGTCCTGACTGCCTTGGACGGTGGA  654
            .|.||.|||.|.|.||.|||.|.|||.|.||||   ..|||||  .||.|.| .||||||||||||||..||||
Sbjct  584  TATTGAAGACACCTTTGGACAGAGAAAAGCAGAAATCCTACCA--CTTGACT-TTGACTGCCTTGGACTTTGGA  654

Query  655  CATCCACCCCTAAGCGGCAC--CACTGAGCT-CCGGATCCAGGTAACCGACGCCAATGATAATCCCCCGGTATT  725
            ..|||||||||||||.||||  |||  ||.| |..|.||.| ||.||.||.||||||||||||.|.||.||.||
Sbjct  655  GCTCCACCCCTAAGCAGCACTGCAC--AGATACACGTTCTA-GTGACTGATGCCAATGATAATGCTCCAGTGTT  725

Query  726  CAACCGAGACGTGTACAGAGTCAGCCTTCGGGAAAACGTGCCACCAGGCACCACTGTGTTGCAAGTGTCAGCCA  799
            ||..|.||||||.|||||.||.||||||...|||||||||...||.||.|||||.|||.|.||.|||.|.||||
Sbjct  726  CAGTCAAGACGTATACAGGGTGAGCCTTTCAGAAAACGTGTACCCGGGGACCACGGTGCTACAGGTGACTGCCA  799

Query  800  CTGACCAAGACGAGGGCATCAACTCAGAAATTACTTATTCCTT--------CTA--CAGA--ACCGGGCAAATC  861
            |.|||||.||.|||||..||||..|.||.|||||||..||.||        |||  ||||  |||   |||   
Sbjct  800  CGGACCAGGATGAGGGTGTCAATGCCGAGATTACTTTCTCTTTCAGTGAAGCTAGCCAGATCACC---CAA---  867

Query  862  TTTAGTCTGAATTCAAAGAGCGGAGAAATTACCACTCAAAAGAAACTGGATTTTGAAGAGACCAAGGAATATTC  935
            |||...|||||.||.||.|.|||.||||||||...|..|||.|.|.|.|||||||||||...|||.||||||||
Sbjct  868  TTTGACCTGAACTCTAACACCGGGGAAATTACTGTTTTAAATACATTAGATTTTGAAGAAGTCAAAGAATATTC  941

Query  936  AATGGTTGTAGAAGGGAGGGATGGTGGTGGACTGGTTGCACAATGTACAGTTGA-----AATTAATATTCAAGA  1004
            .||.|||.|.||||..|||||.|||||.|||.||.||||.|||||.|||||.||     ||.|.||     |||
Sbjct  942  CATAGTTTTGGAAGCAAGGGACGGTGGAGGAATGATTGCGCAATGCACAGTGGAGGTAGAAGTCAT-----AGA  1010

Query 1005  TGAAAATGACAATAGCCCAGAAGTTACATTCCATTCTCTACTTGAAATGATTCTGGAAAACGCGGTGCCTGGAA  1078
            ||||||||||||...|||||||||.|.||||||.|||||||...|..|.|||.||||..||||.|.||..||||
Sbjct 1011  TGAAAATGACAACGCCCCAGAAGTGATATTCCAGTCTCTACCCAACCTAATTATGGAGGACGCCGAGCTGGGAA  1084

Query 1079  CACTAATTGCTTTGATCAAAATACATGACCAAGATTCTGGGGAAAATGGGGAGGTTAATTGTCAATTACAAGGC  1152
            |||..|||||||||.|||||.|.|.||||.|.|||||..|..|.|||||.||.||.|.||||.||||..||||.
Sbjct 1085  CACATATTGCTTTGCTCAAAGTCCGTGACAAGGATTCCAGACACAATGGAGAAGTGACTTGTAAATTGGAAGGT  1158

Query 1153  GAAGTCCCTTTTAAGATTATCTCTTCATCCAAAAATTCGTATAAGTTGGTAACAGATGGAACC----CTAGACC  1222
            ||.||.||.|||||.||..|..||||.||.|.|||..|||||||.||.||.|||||||    |    |||||||
Sbjct 1159  GATGTTCCATTTAAAATATTAACTTCTTCAAGAAACACGTATAAATTAGTGACAGATG----CTGTTCTAGACC  1228

Query 1223  GAGAGCAAACCCCGGAGTACAATGTCACCATCACAGCCACAGACAGGGGCAAGCCGCCCCTCTCCTCCAGCATA  1296
            |.|||||.|..||.|||||||||.|.|||.|.||.||.|||||..||||||||||.||||||||||||||....
Sbjct 1229  GCGAGCAGAATCCAGAGTACAATATAACCGTTACGGCAACAGATCGGGGCAAGCCTCCCCTCTCCTCCAGTTCC  1302

Query 1297  AGCGTCATCCTACATATCAGAGACGTCAACGATAACGCTCCGGTTTTC-CACCAGGCGTCCTACTTAGTCAGTG  1369
            |||.|||.|||.||.||..|.||.||.||.||.||||||||||||||| || |||.|.|||||..|||||...|
Sbjct 1303  AGCATCACCCTGCACATTGGTGATGTAAATGACAACGCTCCGGTTTTCTCA-CAGTCTTCCTATATAGTCCACG  1375

Query 1370  TACCCGAAAACAACCCTCCTGGGGCCTCCATCGCGCAAGTCTGCGCCTCGGACCTGGACTTGGGGTTGAACGGC  1443
            |..||||.||||||||.|||||.|||||.||..|.||||||.|.||.||.||.|.||||||||||...||||||
Sbjct 1376  TGGCCGAGAACAACCCGCCTGGAGCCTCTATTTCACAAGTCAGGGCTTCTGATCCGGACTTGGGGCCCAACGGC  1449

Query 1444  CAAGTCTCCTACTCTATCATGGCCAGCGACCTAGAGCCTCTGGCACTGGCCTCTTACGTGTCCATGAGCGCGCA  1517
            ||||||||.||||..|||||||||||.|||||.||||..|.||..|||.|.||.|||||||||||.||||||.|
Sbjct 1450  CAAGTCTCTTACTGCATCATGGCCAGTGACCTGGAGCAGCGGGAGCTGTCATCCTACGTGTCCATAAGCGCGGA  1523

Query 1518  AAGTGGGGTGGTGTTCGCGCAGCGCGCCTTTGACTACGAGCAGCTGCGCACCTTCGAACTCACACTACAGGCCC  1591
            .||.||||||||||||||||||||||||||.|||.||||||||||||||.||||||||||||||||.|||||||
Sbjct 1524  GAGCGGGGTGGTGTTCGCGCAGCGCGCCTTCGACCACGAGCAGCTGCGCGCCTTCGAACTCACACTGCAGGCCC  1597

Query 1592  GCGACCAGGGCTCGCCTGCGCTCAGCGCAAACGTGAGCCTGCGCGTGTTGGTGGGCGACCGAAACGACAACGCA  1665
            ||||||||||||||||.|||||||||||.||||||||||||||||||||.||||.||||||.||||||||.||.
Sbjct 1598  GCGACCAGGGCTCGCCAGCGCTCAGCGCGAACGTGAGCCTGCGCGTGTTAGTGGACGACCGCAACGACAATGCG  1671

Query 1666  CCGCGGGTGCTGTACCCCGCGCTGGGTCCCGACGGCTCTGCGCTCTTCGATATGGTGCCGCGCGCTGCAGAGCC  1739
            ||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1672  CCACGGGTGCTGTACCCCGCGCTGGGTCCCGACGGCTCTGCGCTCTTCGATATGGTGCCGCACGCTGCAGAGCC  1745

Query 1740  CGGCTACCTGGTGACCAAGGTAGTGGCCGTGGACGCAGACTCAGGACACAACGCCTGGCTGTCCTACCACGTGC  1813
            .||||||.|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1746  TGGCTACTTGGTGACCAAGGTAGTGGCGGTGGACGCAGACTCAGGACACAACGCCTGGCTGTCCTACCACGTGC  1819

Query 1814  TGCAGGCTAGCGAGCCCGGGCTCTTCAGCCTGGGGCTGCGCACAGGAGAGGTGCGCACAGCGCGTGCCTTGGGC  1887
            |||||||||||||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||||.|||
Sbjct 1820  TGCAGGCTAGCGAGCCCGGGCTCTTCAGCCTGGGGCTGCGCACGGGCGAAGTGCGCACAGCGCGTGCCTTAGGC  1893

Query 1888  GACAGGGACGCGGCCCGCCAGCGCCTGCTGGTTGCTGTGCGTGATGGTGGACAGCCGCCACTCTCCGCCACCGC  1961
            |||||||||||.|.||||||||||||.|||||.||.||||||||.|||||||||||.||||||||.|||||.||
Sbjct 1894  GACAGGGACGCCGTCCGCCAGCGCCTTCTGGTCGCCGTGCGTGACGGTGGACAGCCACCACTCTCGGCCACTGC  1967

Query 1962  CACGCTGCACTTGGTCTTTGCTGACAGCTTGCAGGAGGTGCTGCCGGATATCACTGACCGCCCTGTACCCTCTG  2035
            ||||.|||||.|||||||.||.|||||||||||||||||||||||||||||||||||||||||.|..|||||||
Sbjct 1968  CACGTTGCACCTGGTCTTCGCCGACAGCTTGCAGGAGGTGCTGCCGGATATCACTGACCGCCCCGACCCCTCTG  2041

Query 2036  ACCCCCAGGCTGAGCTGCAGTTTTACCTAGTGGTGGCCTTGGCCTTGATCTCAGTGCTCTTCCTCCTGGCCGTG  2109
            |||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||
Sbjct 2042  ACCTCCAGGCTGAGCTGCAGTTTTACCTAGTGGTGGCCTTGGCCTTGATCTCAGTGCTCTTCCTCGTGGCCATG  2115

Query 2110  ATTCTGGCCGTTGCCTTGCGCCTGCGACGCTCCTCCAGCCCTGCCGCCTGGAGCTGCTTCCAACCTGGTCTCTG  2183
            |||||||||.|||||||||||||||||||||||||||||||.|||.||||||||||||||||.|||||||||||
Sbjct 2116  ATTCTGGCCATTGCCTTGCGCCTGCGACGCTCCTCCAGCCCCGCCTCCTGGAGCTGCTTCCAGCCTGGTCTCTG  2189

Query 2184  TGTCAAGTCTGGACCTGTGGTTCCCCCCAACTACAGTCAGGGGACTTTGCCTTATTCCTACAACCTATGTGTTG  2257
            |||.||.||.|.|.|.||||||||||||||||||||..|||||||||||||||||||||||||.||||||||||
Sbjct 2190  TGTTAAATCCGAATCCGTGGTTCCCCCCAACTACAGCGAGGGGACTTTGCCTTATTCCTACAATCTATGTGTTG  2263

Query 2258  CACATACAGGAAAGACGGAGTTTAATTTCCTAAAATGTAGTGAGCAATTGAGTTCAGGACAAGACATACTTTGT  2331
            ||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.
Sbjct 2264  CACATACAGGAAAGACGGAGTTTAATTTCCTAAAATGTAGTGAGCAGTTGAGTTCAGGACAAGACATACTTTGC  2337

Query 2332  GGTGATTCATCTGGGGCCTTATTTCCACTTTGTAATTCCAGCGAGTCGACTTCCCATCCTGAGTTGGTGAGTTT  2405
            |||||||||||||||||||||||||||||||||||||||||.||.|.|||||||||||   ||           
Sbjct 2338  GGTGATTCATCTGGGGCCTTATTTCCACTTTGTAATTCCAGTGAATTGACTTCCCATC---AG-----------  2397

Query 2406  CATTTATGTCTATTCTTTTTCATTACCCACCCAA-----------TTTTCTGTATTTACA--------------  2454
                                ||...|||.|||||           .|||||.|     ||              
Sbjct 2398  --------------------CAAGCCCCGCCCAACACGGACTGGCGTTTCTCT-----CAGGCCCAGAGACCCG  2446

Query 2455  --------------------------------------------------------------------------  2454
                                                                                      
Sbjct 2447  GCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAA  2520

Query 2455  --------------------------------------------------------------------------  2454
                                                                                      
Sbjct 2521  GCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGG  2594

Query 2455  --------------------------------------------------------------------------  2454
                                                                                      
Sbjct 2595  ATTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAG  2668

Query 2455  --------------------------------------------------------------------------  2454
                                                                                      
Sbjct 2669  GCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAG  2742

Query 2455  ---------------------------  2454
                                       
Sbjct 2743  AAGAAGTCGGGCAAGAAGGAGAAGAAG  2769

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