Nucleotide Global Alignment

Description

Query:
TRCN0000480095
Subject:
XM_017020323.2
Aligned Length:
2728
Identities:
578
Gaps:
2120

Alignment

Query    1  ATGGCGACCCCGGACCAGAAGTCGCCGAACGTTCTGCTGCAGAACCTGTGCTGCAGGATCCTGGGCAGGAGCGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGCTGATGTAGCCCAGCAGTTCCAGTATGCTGTGCGGGTGATTGGCAGCAACTTCGCCCCAACTGTTGAAAGAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATGAATTTTTAGTAGCTGAAAAAATCAAGAAAGAGCTTATTCGACAACGAAGAGAAGCAGATGCTGCATTATTT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCAGAACTCCACAGAAAACTTCATTCACAGGGAGTTTTGAAAAATAAATGGTCAATACTCTACCTCTTGCTGAG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CCTCAGTGAGGACCCACGCAGGCAGCCAAGCAAGGTTTCTAGCTATGCTACGTTATTTGCTCAGGCCTTACCAA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GAGATGCCCACTCAACCCCTTACTACTATGCCAGGCCTCAGACCCTTCCCCTGAGCTACCAAGATCGGAGTGCC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CAGTCAGCCCAGAGCTCCGGCAGCGTGGGCAGCAGTGGCATCAGCAGCATTGGCCTGTGTGCCCTCAGTGGCCC  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CGCGCCTGCGCCACAATCTCTCCTCCCAGGACAGTCTAATCAAGCTCCAGGAGTAGGAGATTGCCTTCGACAGC  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  AGTTGGGGTCACGACTCGCATGGACTTTAACTGCAAATCAGCCTTCTTCACAAGCCACTACCTCAAAAGGTGTC  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  CCCAGTGCTGTGTCTCGCAACATGACAAGGTCCAGGAGAGAAGGGGATACGGGTGGTACTATGGAAATTACAGA  740
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ---------------------ATGACAAGGTCCAGGAGAGAAGGGGATACGGGTGGTACTATGGAAATTACAGA  53

Query  741  AGCAGCTCTGGTAAGGGACATTTTGTACGTCTTTCAGGGCATAGATGGCAAAAACATCAAAATGAACAACACTG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   54  AGCAGCTCTGGTAAGGGACATTTTGTACGTCTTTCAGGGCATAGATGGCAAAAACATCAAAATGAACAACACTG  127

Query  815  AAAATTGTTACAAAGTAGAAGGAAAGGCAAATCTAAGTAGGTCTTTGAGAGACACAGCAGTCAGGCTTTCTGAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  128  AAAATTGTTACAAAGTAGAAGGAAAGGCAAATCTAAGTAGGTCTTTGAGAGACACAGCAGTCAGGCTTTCTGAG  201

Query  889  TTGGGATGGTTGCATAATAAAATCAGAAGATACACGGACCAGAGGAGCCTGGACCGCTCATTCGGACTCGTCGG  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  202  TTGGGATGGTTGCATAATAAAATCAGAAGATACACGGACCAGAGGAGCCTGGACCGCTCATTCGGACTCGTCGG  275

Query  963  GCAGAGCTTTTGTGCTGCCTTGCACCAGGAACTCAGAGAATACTATCGATTGCTCTCTGTTTTACATTCTCAGC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  276  GCAGAGCTTTTGTGCTGCCTTGCACCAGGAACTCAGAGAATACTATCGATTGCTCTCTGTTTTACATTCTCAGC  349

Query 1037  TACAACTAGAGGATGACCAGGGTGTGAATTTGGGACTTGAGAGTAGTTTAACACTTCGGCGCCTCCTGGTTTGG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  350  TACAACTAGAGGATGACCAGGGTGTGAATTTGGGACTTGAGAGTAGTTTAACACTTCGGCGCCTCCTGGTTTGG  423

Query 1111  ACCTATGATCCCAAAATACGACTGAAGACCCTTGCGGCCCTAGTGGACCACTGCCAAGG---------------  1169
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               
Sbjct  424  ACCTATGATCCCAAAATACGACTGAAGACCCTTGCGGCCCTAGTGGACCACTGCCAAGGAAGGAAAGGAGGTGA  497

Query 1170  -------TC------CCACGC---------------------------GCG---TCTTTCCCACGCACGTCTTT  1200
                   ||      ||||||                           |||   |||....|| ||||.||   
Sbjct  498  GCTGGCCTCAGCTGTCCACGCCTACACAAAAACAGGAGACCCGTACATGCGGTCTCTGGTGCA-GCACATC---  567

Query 1201  CCCA--CGCGCGACT---------------TTCC--CACGCGC------------------------GAC-TTT  1230
            |.||  |.||.|.||               ||||  .|| |||                        ||| .||
Sbjct  568  CTCAGCCTCGTGTCTCATCCTGTTTTGAGCTTCCTGTAC-CGCTGGATATATGATGGGGAGCTTGAGGACACTT  640

Query 1231  CCCATGCACGTCTT-----------TCCCAC----------GCGCGTCTTTCCCACG-CGCGTCT-------GG  1275
            .|||.|.|..|.||           |||.||          |..||.||.|..|||| |..||.|       ||
Sbjct  641  ACCACGAATTTTTTGTAGCATCAGATCCAACAGTTAAAACAGATCGACTGTGGCACGACAAGTATACTTTGAGG  714

Query 1276  CACTCG-------CTTTGTT------------TCA------GAA----CTCGTTTG------------------  1302
            .|.|||       |||.|||            |||      |||    ||  ||||                  
Sbjct  715  AAATCGATGATTCCTTCGTTTATGACGATGGATCAGTCTAGGAAGGTCCT--TTTGATAGGAAAATCAATAAAT  786

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct  787  TTCTTGCACCAAGTTTGTCATGATCAGACTCCCACTACAAAGATGATAGCTGTGACCAAGTCTGCAGAGTCACC  860

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct  861  CCAGGACGCTGCAGACCTATTCACAGACTTGGAAAATGCATTTCAGGGGAAGATTGATGCTGCTTATTTTGAGA  934

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct  935  CCAGCAAATACCTGTTGGATGTTCTCAATAAAAAGTACAGCTTGCTGGACCACATGCAGGCAATGAGGCGGTAC  1008

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1009  CTGCTTCTTGGTCAAGGAGACTTTATAAGGCACTTAATGGACTTGCTAAAACCAGAACTTGTCCGTCCAGCTAC  1082

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1083  GACTTTGTATCAGCATAACTTGACTGGAATTCTAGAAACCGCTGTCAGAGCCACCAACGCACAGTTTGACAGTC  1156

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1157  CTGAGATCCTGCGAAGGCTGGACGTGCGGCTGCTGGAGGTCTCTCCAGGTGACACTGGATGGGATGTCTTCAGC  1230

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1231  CTCGATTATCATGTTGACGGACCAATTGCAACTGTGTTTACTCGAGAATGTATGAGCCACTACCTAAGAGTATT  1304

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1305  TAACTTCCTCTGGAGGGCGAAGCGGATGGAATACATCCTCACTGACATACGGAAGGGACACATGTGCAATGCAA  1378

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1379  AGCTCCTGAGAAACATGCCAGAGTTCTCCGGGGTGCTGCACCAGTGTCACATTTTGGCCTCTGAGATGGTCCAT  1452

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1453  TTCATTCATCAGATGCAGTATTACATCACATTTGAGGTGCTTGAATGTTCTTGGGATGAGCTTTGGAACAAAGT  1526

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1527  CCAGCAGGCCCAGGATTTGGATCACATCATTGCTGCACACGAGGTGTTCTTAGACACCATCATCTCCCGCTGCC  1600

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1601  TGCTGGACAGTGACTCCAGGGCACTTTTAAATCAACTTAGAGCTGTGTTTGATCAAATTATTGAACTTCAGAAT  1674

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1675  GCTCAAGATGCAATATACAGAGCTGCTCTGGAAGAATTGCAGAGACGATTACAGTTTGAAGAGAAAAAGAAACA  1748

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1749  GCGTGAAATTGAGGGCCAGTGGGGAGTGACGGCAGCAGAGGAAGAGGAGGAAAATAAGAGGATTGGAGAATTTA  1822

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1823  AAGAATCTATACCAAAAATGTGCTCACAGTTGCGAATATTGACCCATTTCTACCAGGGTATCGTGCAGCAGTTT  1896

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1897  TTGGTGTTACTGACGACCAGCTCTGACGAGAGTCTTCGGTTTCTTAGCTTCAGGCTGGACTTCAACGAGCATTA  1970

Query 1303  ----------------------------------------------------------------  1302
                                                                            
Sbjct 1971  CAAAGCCAGGGAGCCCAGGCTCCGTGTGTCTCTGGGTACCAGGGGGCGGCGCAGCTCCCACACG  2034

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