Nucleotide Global Alignment

Description

Query:
TRCN0000480095
Subject:
XR_001749455.2
Aligned Length:
4110
Identities:
1265
Gaps:
2815

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATTGTGGGAAGCGCCCGCGCTTTCGGCGGGTTCCGTTAAAATGGCGCCCTGGTGGCCGGCGGCGCCCGCGCCTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCTGTCAGGAGCAGGGAGCTTGCGGGGCGCAGGAAGGGCGCGGGCCGCGGTCCCTGCGCGTGCGGCGGCAGT  148

Query    1  -----------------------------------------ATGGCGACCCCGGACCAGAAGTCGCCGAACGTT  33
                                                     |||||||||||||||||||||||||||||||||
Sbjct  149  GGCGGCTCTGCCCGGACCACCGTGCACGGCTCCGGGCGAGGATGGCGACCCCGGACCAGAAGTCGCCGAACGTT  222

Query   34  CTGCTGCAGAACCTGTGCTGCAGGATCCTGGGCAGGAGCGAAGCTGATGTAGCCCAGCAGTTCCAGTATGCTGT  107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTGCTGCAGAACCTGTGCTGCAGGATCCTGGGCAGGAGCGAAGCTGATGTAGCCCAGCAGTTCCAGTATGCTGT  296

Query  108  GCGGGTGATTGGCAGCAACTTCGCCCCAACTGTTGAAAGAGATGAATTTTTAGTAGCTGAAAAAATCAAGAAAG  181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCGGGTGATTGGCAGCAACTTCGCCCCAACTGTTGAAAGAGATGAATTTTTAGTAGCTGAAAAAATCAAGAAAG  370

Query  182  AGCTTATTCGACAACGAAGAGAAGCAGATGCTGCATTATTTTCAGAACTCCACAGAAAACTTCATTCACAGGGA  255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGCTTATTCGACAACGAAGAGAAGCAGATGCTGCATTATTTTCAGAACTCCACAGAAAACTTCATTCACAGGGA  444

Query  256  GTTTTGAAAAATAAATGGTCAATACTCTACCTCTTGCTGAGCCTCAGTGAGGACCCACGCAGGCAGCCAAGCAA  329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTTTTGAAAAATAAATGGTCAATACTCTACCTCTTGCTGAGCCTCAGTGAGGACCCACGCAGGCAGCCAAGCAA  518

Query  330  GGTTTCTAGCTATGCTACGTTATTTGCTCAGGCCTTACCAAGAGATGCCCACTCAACCCCTTACTACTATGCCA  403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGTTTCTAGCTATGCTACGTTATTTGCTCAGGCCTTACCAAGAGATGCCCACTCAACCCCTTACTACTATGCCA  592

Query  404  GGCCTCAGACCCTTCCCCTGAGCTACCAAGATCGGAGTGCCCAGTCAGCCCAGAGCTCCGGCAGCGTGGGCAGC  477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGCCTCAGACCCTTCCCCTGAGCTACCAAGATCGGAGTGCCCAGTCAGCCCAGAGCTCCGGCAGCGTGGGCAGC  666

Query  478  AGTGGCATCAGCAGCATTGGCCTGTGTGCCCTCAGTGGCCCCGCGCCTGCGCCACAATCTCTCCTCCCAGGACA  551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGTGGCATCAGCAGCATTGGCCTGTGTGCCCTCAGTGGCCCCGCGCCTGCGCCACAATCTCTCCTCCCAGGACA  740

Query  552  GTCTAATCAAGCTCCAGGAGTAGGAGATTGCCTTCGACAGCAGTTGGGGTCACGACTCGCATGGACTTTAACTG  625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GTCTAATCAAGCTCCAGGAGTAGGAGATTGCCTTCGACAGCAGTTGGGGTCACGACTCGCATGGACTTTAACTG  814

Query  626  CAAATCAGCCTTCTTCACAAGCCACTACCTCAAAAGGTGTCCCCAGTGCTGTGTCTCGCAACATGACAAGGTCC  699
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAAATCAGCCTTCTTCACAAGCCACTACCTCAAAAGGTGTCCCCAGTGCTGTGTCTCGCAACATGACAAGGTCC  888

Query  700  AGGAGAGAAGGGGATACGGGTGGTACTATGGAAATTACAGAAGCAGCTCTGGTAAGGGACATTTTGTACGTCTT  773
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGGAGAGAAGGGGATACGGGTGGTACTATGGAAATTACAGAAGCAGCTCTGGTAAGGGACATTTTGTACGTCTT  962

Query  774  TCAGGGCATAGATGGCAAAAACATCAAAATGAACAACACTGAAAATTGTTACAAAGTAGAAGGAAAGGCAAATC  847
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCAGGGCATAGATGGCAAAAACATCAAAATGAACAACACTGAAAATTGTTACAAAGTAGAAGGAAAGGCAAATC  1036

Query  848  TAAGTAGGTCTTTGAGAGACACAGCAGTCAGGCTTTCTGAGTTGGGATGGTTGCATAATAAAATCAGAAGATAC  921
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TAAGTAGGTCTTTGAGAGACACAGCAGTCAGGCTTTCTGAGTTGGGATGGTTGCATAATAAAATCAGAAGATAC  1110

Query  922  ACGGACCAGAGGAGCCTGGACCGCTCATTCGGACTCGTCGGGCAGAGCTTTTGTGCTGCCTTGCACCAGGAACT  995
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ACGGACCAGAGGAGCCTGGACCGCTCATTCGGACTCGTCGGGCAGAGCTTTTGTGCTGCCTTGCACCAGGAACT  1184

Query  996  CAGAGAATACTATCGATTGCTCTCTGTTTTACATTCTCAGCTACAACTAGAGGATGACCAGGGTGTGAATTTGG  1069
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CAGAGAATACTATCGATTGCTCTCTGTTTTACATTCTCAGCTACAACTAGAGGATGACCAGGGTGTGAATTTGG  1258

Query 1070  GACTTGAGAGTAGTTTAACACTTCGGCGCCTCCTGGTTTGGACCTATGATCCCAAAATACGACTGAAGACCCTT  1143
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GACTTGAGAGTAGTTTAACACTTCGGCGCCTCCTGGTTTGGACCTATGATCCCAAAATACGACTGAAGACCCTT  1332

Query 1144  GCGGCCCTAGTGGACCACTGCCAAGG----------------------TC------CCACGC------------  1177
            ||||||||||||||||||||||||||                      ||      ||||||            
Sbjct 1333  GCGGCCCTAGTGGACCACTGCCAAGGAAGGAAAGGAGGTGAGCTGGCCTCAGCTGTCCACGCCTACACAAAAAC  1406

Query 1178  ---------------GCG---TCTTTCCCACGCACGTCTTTCCCA--CGCGCGACT---------------TTC  1216
                           |||   |||....|| ||||.||   |.||  |.||.|.||               |||
Sbjct 1407  AGGAGACCCGTACATGCGGTCTCTGGTGCA-GCACATC---CTCAGCCTCGTGTCTCATCCTGTTTTGAGCTTC  1476

Query 1217  C--CACGCGC------------------------GAC-TTTCCCATGCACGTCTT-----------TCCCAC--  1250
            |  .|| |||                        ||| .||.|||.|.|..|.||           |||.||  
Sbjct 1477  CTGTAC-CGCTGGATATATGATGGGGAGCTTGAGGACACTTACCACGAATTTTTTGTAGCATCAGATCCAACAG  1549

Query 1251  --------GCGCGTCTTTCCCACG-CGCGTCT-------GGCACTCG-------CTTTGTT------------T  1289
                    |..||.||.|..|||| |..||.|       ||.|.|||       |||.|||            |
Sbjct 1550  TTAAAACAGATCGACTGTGGCACGACAAGTATACTTTGAGGAAATCGATGATTCCTTCGTTTATGACGATGGAT  1623

Query 1290  CA------GAA----CTCGTTTG---------------------------------------------------  1302
            ||      |||    ||  ||||                                                   
Sbjct 1624  CAGTCTAGGAAGGTCCT--TTTGATAGGAAAATCAATAAATTTCTTGCACCAAGTTTGTCATGATCAGACTCCC  1695

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1696  ACTACAAAGATGATAGCTGTGACCAAGTCTGCAGAGTCACCCCAGGACGCTGCAGACCTATTCACAGACTTGGA  1769

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1770  AAATGCATTTCAGGGGAAGATTGATGCTGCTTATTTTGAGACCAGCAAATACCTGTTGGATGTTCTCAATAAAA  1843

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1844  AGTACAGCTTGCTGGACCACATGCAGGCAATGAGGCGGTACCTGCTTCTTGGTCAAGGAGACTTTATAAGGCAC  1917

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1918  TTAATGGACTTGCTAAAAGTTAAATGTATGTCCTTCTCCACAAGTTCTGGACCAGAGCCTGCTGTGCTTCTAGG  1991

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 1992  TCTAGAGACAGTGCAGACCCCGGCCCAGGCAGCGTGAGCCTGGGCATGAGCATCCCAGGGGTCCACAGCCTGGG  2065

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2066  CCTGGAGATTTTCACCCAAGTGTTTAGAAGAATGAAACTTCTTTTCTGGTGTTCCTTTTAGGACACTTAAAACC  2139

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2140  AGAACTTGTCCGTCCAGCTACGACTTTGTATCAGCATAACTTGACTGGAATTCTAGAAACCGCTGTCAGAGCCA  2213

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2214  CCAACGCACAGTTTGACAGTCCTGAGATCCTGCGAAGGCTGGACGTGCGGCTGCTGGAGGTCTCTCCAGGTGAC  2287

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2288  ACTGGATGGGATGTCTTCAGCCTCGATTATCATGTTGACGGACCAATTGCAACTGTGTTTACTCGAGAATGTAT  2361

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2362  GAGCCACTACCTAAGAGTATTTAACTTCCTCTGGAGGGCGAAGCGGATGGAATACATCCTCACTGACATACGGA  2435

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2436  AGGGACACATGTGCAATGCAAAGCTCCTGAGAAACATGCCAGAGTTCTCCGGGGTGCTGCACCAGTGTCACATT  2509

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2510  TTGGCCTCTGAGATGGTCCATTTCATTCATCAGATGCAGTATTACATCACATTTGAGGTGCTTGAATGTTCTTG  2583

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2584  GGATGAGCTTTGGAACAAAGTCCAGCAGGCCCAGGATTTGGATCACATCATTGCTGCACACGAGGTGTTCTTAG  2657

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2658  ACACCATCATCTCCCGCTGCCTGCTGGACAGTGACTCCAGGGCACTTTTAAATCAACTTAGAGCTGTGTTTGAT  2731

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2732  CAAATTATTGAACTTCAGAATGCTCAAGATGCAATATACAGAGCTGCTCTGGAAGAATTGCAGAGACGATTACA  2805

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2806  GTTTGAAGAGAAAAAGAAACAGCGTGAAATTGAGGGCCAGTGGGGAGTGACGGCAGCAGAGGAAGAGGAGGAAA  2879

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2880  ATAAGAGGATTGGAGAATTTAAAGAATCTATACCAAAAATGTGCTCACAGTTGCGAATATTGACCCATTTCTAC  2953

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 2954  CAGGGTATCGTGCAGCAGTTTTTGGTGTTACTGACGACCAGCTCTGACGAGAGTCTTCGGTTTCTTAGCTTCAG  3027

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3028  GCTGGACTTCAACGAGCATTACAAAGCCAGGGAGCCCAGGCTCCGTGTGTCTCTGGGTACCAGGGGGCGGCGCA  3101

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3102  GCTCCCACACGTGAAGCTCGCGGTCCTCCCAGGGAGCTGCGGGTGATGTTCGTTGCACTGCTAGACACGAAATT  3175

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3176  CCCATTGACGTCCTGCAGGAACTGCATGCTGCAGGTGTCCTGCCCTTCCGCCCACGAGTGCGCCATGTTTCAGC  3249

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3250  GGAGCGGCGTGTGGGAGAAGCCACGTCGTGTTTCACATGTCGGAGTCGAATGCATTTGTAAATCCCTAAGTCAA  3323

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3324  GTAGGCTGGCTGCACTGTTCACATTTGTCTCTAAAAGTCTTCATCGCTAAAAGATACCATAATTTGCTGAGGCT  3397

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3398  TCTTAAGCTTTCTATGTTATAATTTATATTTGTCACTTTAAAAAATCCATTTCTTTTAGAAAAAATTAGGGTGA  3471

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3472  TAGGATATTCATTAGTTAAGATGGTAACGTCATTGCTATTTTTTTAACATCCTCTTTAGAGGTAATTTTTGTTA  3545

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3546  ACATAACCAAAAATTAAATTGAAACAAAATGTCCCAACTAAGAAAATATATAGAGCATTTTATTTTTTTTTAGT  3619

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3620  GTTGTAAAATATTAACCTCTGTGAGATCCTTTGTATCTTAATGCATTACCTTTACACATATTTATTCTTATTTT  3693

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3694  CTCTCCTTTCAGAGTTTACATTTTTATATTTAATTTACTATTTCAGATTTTTAAAATAGTATAGAAAAAAGTAG  3767

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3768  GAGTGATAGAGAACAAAAATACTCTTATACAGTGCAACCCAAATACCGCGAATGCATCAGCTAAAGCAGCGTGT  3841

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3842  AAATAGGAGTGACGAGAAAGTTAATGGAGTATTTTATTTTCAAAGTTCCTGATAAGCATTGGAAAGAAATCGAC  3915

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3916  ATGGATAATGAAGATTTCCTTTTTCCTTGCCTATTTTTTCATTGTAAATATTTATATACTACTGACCAAGATGT  3989

Query 1303  --------------------------------------------------------------------------  1302
                                                                                      
Sbjct 3990  TGGGGTGGGGGGGATTGTTTTTTGTAAAAATGTCATTATCAGGTCACATAAATCTGCCTTTATGTTGCATAAGT  4063

Query 1303  ----------------------------------------  1302
                                                    
Sbjct 4064  GAAAATTTAGAAAATTAAAAGCAATTATCTTTCAGATGCA  4103

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