Nucleotide Global Alignment

Description

Query:
TRCN0000480245
Subject:
XR_001783694.1
Aligned Length:
2789
Identities:
852
Gaps:
1831

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCTGCAGCTCTCTTGCACTGGCTGGAGAGGGAAAGTTATGGACCTCTTGGGATGACTGGAATATCCATGGGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GACATATGCTGTTTGGCACTCATGGGTGTAAGCAAGTTAGATATTCTATACCGGAGACTTCTTCTCACAAAACT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTTCATCAGAGGATGGGGAAGGCCAGAAGACCTCAAGAGACTCTTTGAATTCAGAAAGATGATTGGAAATCGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAAGGTGCCAGAACCTGGTTTCAAGTGACTACCCGGTACACATCGATAAGGTTGAAGAACAGTCAGATTGTAAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATCCTAGATGGACACTTTGTTTCTCCCATGGCCCACTATGTGCCTGGTATCATGCCAATTGAATCTGTTGTTGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAGATTCCAGTTTATCGTGCCTAAGGAATGGAACAGCAGGTACCGACCTGTGTGCATTCATCTGGCTGGAACAG  444

Query    1  --------------------------------ATGGCCCGTCCTATGATTAAAGAAGCCCGAATGGCTTCTTTA  42
                                            |||||.||||||||||||||.||.|||.|.||||||||.||.
Sbjct  445  GAGACCATCATTACTGGAGGCGCAGAACACTCATGGCTCGTCCTATGATTAAGGAGGCCAGGATGGCTTCATTG  518

Query   43  TTGTTAGAAAACCCTTATTATGGCTGCAGGAAACCCAAGGACCAAGTAAGGTCCAGCTTAAAAAATGTGTCCGA  116
            ||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||.||
Sbjct  519  TTGTTAGAAAACCCTTATTATGGCTGCAGGAAGCCCAAGGACCAAGTAAGATCCAGCTTAAAAAATGTGTCAGA  592

Query  117  CCTTTTTGTGATGGGAGGAGCTCTTGTTTTAGAATCTGCAGCTCTCTTGCACTGGCTAGAGAGGGAAGGTTACG  190
            |||.||||||||||||||.||||||.||.|.||.|||||||||||||||||||||||.||||||||||||||.|
Sbjct  593  CCTATTTGTGATGGGAGGCGCTCTTATTCTTGAGTCTGCAGCTCTCTTGCACTGGCTGGAGAGGGAAGGTTATG  666

Query  191  GCCCTTTAGGAATGACTGGAATATCCATGGGAGGACACATGGCTTCCTTAGCGGTATCCAACTGGCCTAAGCCC  264
            |.|||.|.||.||||||||||||||||||||||||||.|||||.||||||||.||.|||||||||||.||||||
Sbjct  667  GACCTCTTGGGATGACTGGAATATCCATGGGAGGACATATGGCCTCCTTAGCAGTGTCCAACTGGCCCAAGCCC  740

Query  265  ATGCCATTGATTCCATGCCTGTCTTGGTCCACAGCATCTGGGGTCTTCACTACGGGTGTGTTGAGTAAATCAAT  338
            |||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  741  ATGCCGTTGATTCCATGCCTGTCTTGGTCCACAGCATCTGGGGTCTTCACTACGGGTGTATTGAGTAAATCAAT  814

Query  339  TAATTGGAGGGAGCTGGAAAAGCAATATTATACCCAGACAGTTTATGAAGAAGAAATTATTCACATGCTTGAAT  412
            |||||||.|||||||.||||||||.||||||||.|||||||||||||||||||||||||||||.||||||||||
Sbjct  815  TAATTGGCGGGAGCTCGAAAAGCAGTATTATACACAGACAGTTTATGAAGAAGAAATTATTCATATGCTTGAAT  888

Query  413  ACTGTGGAACAGATTCTTTCAAAATGGGACAAGAGTTTGTGAAACACTTCACTAGCAGTGCAGACAAGCTAACT  486
            |||||||    ||||||||||||||||||||.|||||..||||.|||||..||||||.||||||||||||.|||
Sbjct  889  ACTGTGG----GATTCTTTCAAAATGGGACACGAGTTCATGAATCACTTGCCTAGCAATGCAGACAAGCTGACT  958

Query  487  AACCTTAATCTGGTTTCCAGAACTTTAAATTTAGATATATCAAACCAAGTTGTATCCCAAAAACCTGCTGACTG  560
            |||||.||||||||||||||||||||||||||||||||..||.|||||||||||||||.|||...|||..|.||
Sbjct  959  AACCTGAATCTGGTTTCCAGAACTTTAAATTTAGATATGACAGACCAAGTTGTATCCCCAAAGGATGCCAAGTG  1032

Query  561  CCATAATTCTAGCAAAACATCTGTCAGTGCGACATCAGAAGGACTCTTATTGCAAGATACCTCTAAGATGAAGC  634
            ||||||.|||.|.|||||||||.|||||||..|.|||.|.||||...|.|||||||||||..||||||||.|..
Sbjct 1033  CCATAAGTCTGGTAAAACATCTATCAGTGCTCCTTCAAATGGACAGCTGTTGCAAGATACAGCTAAGATGGAAT  1106

Query  635  GCTTCAATCAAACACTTTCAACCAACAAAAG-TGGTTATACAAGTCGCAACCCTCAGTCATACCACCTACTTAG  707
            ||||.||||||||.||.||.||.|||||||| ||||| |.|||||..||||||||||||||..|||||.||.|.
Sbjct 1107  GCTTGAATCAAACGCTCTCGACTAACAAAAGTTGGTT-TGCAAGTTACAACCCTCAGTCATTTCACCTGCTCAA  1179

Query  708  TAAAGAACAAAGCAGAAACAGTCTTCGGAAAGAGTCTTTAATATTTATGAAAGGAGTCATGGATGAATGTACTC  781
            ||.|||||||||.||||.||.||.||..|||||.|||||||||||.||||||||||||||||||||||||||||
Sbjct 1180  TAGAGAACAAAGAAGAAGCAATCGTCAAAAAGAATCTTTAATATTCATGAAAGGAGTCATGGATGAATGTACTC  1253

Query  782  ATGTAGCAAATTTCTCAGTCCCAGTTGATCCAAGCCTCATTATAGTGGTTCAAGCCAAAGAAGATGCCTATATT  855
            |.||||||||.||||||||.|||||||||||||||||||||||||||||.|||||||||||.||||||||||||
Sbjct 1254  ACGTAGCAAACTTCTCAGTTCCAGTTGATCCAAGCCTCATTATAGTGGTACAAGCCAAAGAGGATGCCTATATT  1327

Query  856  CCACGAACAGGAGTTCGAAGTTTACAAGAAATTTGGCCTGGTTGTGAAATCCGATACTTAGAAGGGGGTCATAT  929
            ||||||||||||||||||||.||.|||||||||||||||||||||||||||||.||..||||||||||||||||
Sbjct 1328  CCACGAACAGGAGTTCGAAGCTTGCAAGAAATTTGGCCTGGTTGTGAAATCCGGTATCTAGAAGGGGGTCATAT  1401

Query  930  TAGTGCTTATCTTTTTAAACAAGGACTCTTCAGG----------------------------------------  963
            .|||||||||||.||||||||||||||||||||.                                        
Sbjct 1402  CAGTGCTTATCTCTTTAAACAAGGACTCTTCAGACAAGCCATCTACGATGCCTTTGAACGTTTCCTTCATAAAT  1475

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1476  ATGCTAACTAATTGGATTGATGTATTGTATAACATCCTATTTCCTACAAAAAGAGTTTACCCAATGATGATGTG  1549

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1550  AAAAACAAGCAAACAGCACTACATACTTGATTGTTGCCAAATTAGTCTGTGTTGCCAGTGTTACGGGTCAGTTA  1623

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1624  CAAACTGTGGATACATTTCAGTAATGAAAAAACTACTTGAAAAATACAATCCTGAAGTATTTGTAACTCTTTAA  1697

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1698  AAAATCTCATATACCTTATACAACATCTGTTGTTACTATTTATGAAAACATTTTAATTGTGAATAATTTATTGA  1771

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1772  TTCAGAATAAATAGAAACTATTGGTTTTTTAATAGAATTGTTGAAACTAAAATTGTAACATCACATGTACTGTA  1845

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1846  TATTGTTCTATGGCAGTTTTGCTATTAACTTGATTTTAAAAACTCGTGTCTATCCTTTTTGTGTGTGTAGTGGG  1919

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1920  TTTATAATTTGGTTTTCAACTTTAGGTGATTTATTGCCATAGAAATACCTAAGATATAAAATCAGTGTTAGCTT  1993

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1994  TGAATTATGAAAACATCCTGAGTGCTGAGCTGCACCCTCTGTGGTAGTGCACTTGTAGTCCCAGCACTTGGGAA  2067

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2068  GTGGAGACAGGAGTGTCAGGAGTCCAGCCATTCTGTTTTTCATAGCAAAATTTGAGGCCAGCCTGAGCTGTATG  2141

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2142  AGACCCTGTCTCAAACAATTGCCTGGCATGGTAGCTCATGACTTTAATCTTAGCGGGTAGGAGACAGAGCCAAG  2215

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2216  CAGATCTCTTGAAGTGCCAAGGCTGGGACCATGCTTGCCCAGCCTACCTAGACTCTGAGGCCAGTCCCCAGCAC  2289

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2290  TGCCAAATGAAAAGAAAAGCTGGAGGTATTTGGGAAATGGGGGTTATACATGTTTTCTCTACTTAAGAGAGTTT  2363

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2364  TATGTCGAAAATGGAAATAATAAAAGAACATTGTACTAGATGGTGGGTTCTGTCAGACATTTCTTATACACCTG  2437

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2438  TTCTTCAGTTGCTTACAGACTGAGTTAACAACTTTGACCTTTTAATTTCAGAATTTAAAAGCTACATATTAAAT  2511

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2512  TAAACCATTGTACAGAAAAACACGAGGTTTTACACACTGCTAGCTTTTTAAATGGAAATTATATGGATAGATAT  2585

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2586  TTGGTGCTAATGTTAAACTGCTCTGAGCTAAAATGTTTAAAAGGCAAATGTGTTTACTTTGAAATCTGTATTGC  2659

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2660  CCTTAAATTTAAATTAGGTCTTGCAGGTCTAGTGAGGATATGTGGATTGTAACATACCTTCTGCAGCTTTTTAA  2733

Query  964  ---------------------------------------------------  963
                                                               
Sbjct 2734  AAAGATGCTATCGCACTCCAATGTCTTTGCCACTAAAATTTCTACCAGCTA  2784

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