Nucleotide Global Alignment

Description

Query:
TRCN0000480418
Subject:
NM_018929.3
Aligned Length:
2871
Identities:
2566
Gaps:
276

Alignment

Query    1  ATGGGGCCCAAGACACTCCCACAGCTCGCTGGGAAATGGCAAGTGCTGTGCATGTTGTCCTTGTGCTGCTGGGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGGCCCAAGACACTCCCACAGCTCGCTGGGAAATGGCAAGTGCTGTGCATGTTGTCCTTGTGCTGCTGGGG  74

Query   75  CTGGGTGTCTGGGCAGCTTCGTTACTCAGTGGTGGAGGAGTCTGAGCCGGGGACGCTGGTGGGGAATGTTGCTC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTGGGTGTCTGGGCAGCTTCGTTACTCAGTGGTGGAGGAGTCTGAGCCGGGGACGCTGGTGGGGAATGTTGCTC  148

Query  149  AGGATCTGGGCTTAAAGATGACAGATCTGTTGAGCCGGCGGCTGCAACTGGGCTCTGAGGAGAATGGGCGCTAT  222
            |||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct  149  AGGATCTGGGCTTAAAGATGACAGATCTGTTGAGCCGGCGGCTGCAATTGGGCTCTGAGGAGAATGGGCGCTAT  222

Query  223  TTTTCCCTGAGCTTGATGAGTGGTGCCCTGGCAGTGAATCAAAAGATTGACCGAGAAAGCCTATGTGGAGCCAG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTTTCCCTGAGCTTGATGAGTGGTGCCCTGGCAGTGAATCAAAAGATTGACCGAGAAAGCCTATGTGGAGCCAG  296

Query  297  CACCAGCTGCCTGCTGCCAGTGCAGGTGGTGACTGAACACCCCCTGGAGCTAATCCGTGTAGAGGTAGAGATCC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CACCAGCTGCCTGCTGCCAGTGCAGGTGGTGACTGAACACCCCCTGGAGCTAATCCGTGTAGAGGTAGAGATCC  370

Query  371  TGGATCTCAATGACAACTCTCCTAGCTTTGCCACCCCTGAGCGAGAGATGCGCATCTCAGAATCAGCAGCATCT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGGATCTCAATGACAACTCTCCTAGCTTTGCCACCCCTGAGCGAGAGATGCGCATCTCAGAATCAGCAGCATCT  444

Query  445  GGGGCACGATTCCCACTGGACAGTGCCCAGGATCCGGATGTGGGCACCAATACTGTGAGCTTTTACACTCTAAG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGGGCACGATTCCCACTGGACAGTGCCCAGGATCCGGATGTGGGCACCAATACTGTGAGCTTTTACACTCTAAG  518

Query  519  CCCCAACAGCCACTTCTCTCTGAATGTGAAGACCCTAAAAGATGGGAAGCCATTCCCAGAGCTGGTGCTAGAGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCCCAACAGCCACTTCTCTCTGAATGTGAAGACCCTAAAAGATGGGAAGCCATTCCCAGAGCTGGTGCTAGAGC  592

Query  593  AGCAGCTGGATCGTGAAGCCCAGGCAAGACATCAGCTGGTGCTTACTGCTGTGGATGGGGGGACCCCAGCCCGC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGCAGCTGGATCGTGAAGCCCAGGCAAGACATCAGCTGGTGCTTACTGCTGTGGATGGGGGGACCCCAGCCCGC  666

Query  667  TCAGGGACCACCCTTATCTCTGTCATCGTGCTGGACATCAATGATAATGCTCCAACCTTCCAATCCTCAGTTCT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TCAGGGACCACCCTTATCTCTGTCATCGTGCTGGACATCAATGATAATGCTCCAACCTTCCAATCCTCAGTTCT  740

Query  741  ACGTGTGGGAATCCCAGAGAATGCACCCATTGGTACTCTGCTGCTCCGCCTCAATGCCACTGATCCAGACGAGG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACGTGTGGGAATCCCAGAGAATGCACCCATTGGTACTCTGCTGCTCCGCCTCAATGCCACTGATCCAGACGAGG  814

Query  815  GCACCAACGGCCAACTAGACTATTCTTTTGGAGACCACACATCTGAGGCAGTGCGGAACCTCTTTGGCCTAGAC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCACCAACGGCCAACTAGACTATTCTTTTGGAGACCACACATCTGAGGCAGTGCGGAACCTCTTTGGCCTAGAC  888

Query  889  CCTAGCAGTGGGGCAATCCATGTGTTGGGTCCCATAGACTTTGAGGAGTCACGTTTCTATGAAATTCATGCAAG  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CCTAGCAGTGGGGCAATCCATGTGTTGGGTCCCATAGACTTTGAGGAGTCACGTTTCTATGAAATTCATGCAAG  962

Query  963  AGCCCGTGACCAGGGACAGCCTGCCATGGAGGGCCACTGTGTGATTCAAGTGGATGTGGGGGATGTCAATGACA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGCCCGTGACCAGGGACAGCCTGCCATGGAGGGCCACTGTGTGATTCAAGTGGATGTGGGGGATGTCAATGACA  1036

Query 1037  ATGCCCCAGAGGTGCTATTGGCCTCTTTGGCCAACCCTGTCCTAGAGAGCACACCAGTGGGCACAGTAGTGGGG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ATGCCCCAGAGGTGCTATTGGCCTCTTTGGCCAACCCTGTCCTAGAGAGCACACCAGTGGGCACAGTAGTGGGG  1110

Query 1111  TTGTTTAATGTGCGAGACCGGGACTCAGGTAGAAATGGTGAAGTGAGCCTTGATATCTCTCCGGACCTGCCATT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TTGTTTAATGTGCGAGACCGGGACTCAGGTAGAAATGGTGAAGTGAGCCTTGATATCTCTCCGGACCTGCCATT  1184

Query 1185  TCAGATTAAGCCTTCTGAGAACCACTACTCGCTGCTAACCAGCCAGCCTTTGGACCGGGAGGCCACATCCCACT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCAGATTAAGCCTTCTGAGAACCACTACTCGCTGCTAACCAGCCAGCCTTTGGACCGGGAGGCCACATCCCACT  1258

Query 1259  ATATCATCGAGCTGCTGGCCAGCGATGCTGGTTCACCTTCCCTACACAAACATCTCACCATCAGGCTCAACATT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ATATCATCGAGCTGCTGGCCAGCGATGCTGGTTCACCTTCCCTACACAAACATCTCACCATCAGGCTCAACATT  1332

Query 1333  TCAGATGTCAATGACAATGCACCCCGCTTCAACCAGCAGCTTTACACTGCTTACATCCTAGAAAACCGGCCTCC  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TCAGATGTCAATGACAATGCACCCCGCTTCAACCAGCAGCTTTACACTGCTTACATCCTAGAAAACCGGCCTCC  1406

Query 1407  GGGCTCCCTTCTTTGCACTGTGGCTGCCTCAGATCCAGACACTGGGGATAATGCCCGCCTCACCTACTCCATTG  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GGGCTCCCTTCTTTGCACTGTGGCTGCCTCAGATCCAGACACTGGGGATAATGCCCGCCTCACCTACTCCATTG  1480

Query 1481  TAGGAAATCAGGTTCAGGGAGCCCCAGCCTCCTCCTTTGTGTATGTCAACCCAGAGGATGGACGGATCTTTGCC  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TAGGAAATCAGGTTCAGGGAGCCCCAGCCTCCTCCTTTGTGTATGTCAACCCAGAGGATGGACGGATCTTTGCC  1554

Query 1555  CAGCGTACCTTTGACTATGAATTGCTGCAGATGCTGCAGATTGTGGTGGGGGTTCGAGACTCCGGCTCTCCCCC  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CAGCGTACCTTTGACTATGAATTGCTGCAGATGCTGCAGATTGTGGTGGGGGTTCGAGACTCCGGCTCTCCCCC  1628

Query 1629  ATTGCATGCCAACACATCTCTGCATGTGTTTGTCCTAGACGAGAATGATAATGCCCCAGCTGTGCTGCACCCAC  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  ATTGCATGCCAACACATCTCTGCATGTGTTTGTCCTAGACGAGAATGATAATGCCCCAGCTGTGCTGCACCCAC  1702

Query 1703  GGCCAGGCTGGGAACACTCAGCCCCCCAGCGTCTCCCTCGCTCTGCTCCTCCTGGCTCCTTGGTCACCAAGGTG  1776
            ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GGCCAGACTGGGAACACTCAGCCCCCCAGCGTCTCCCTCGCTCTGCTCCTCCTGGCTCCTTGGTCACCAAGGTG  1776

Query 1777  ACAGCCGTGGATGCTGATGCAGGCCACAATGCGTGGCTCTCCTACTCACTGTTGCCACAGTCCACAGCCCCAGG  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  ACAGCCGTGGATGCTGATGCAGGCCACAATGCGTGGCTCTCCTACTCACTGTTGCCACAGTCCACAGCCCCAGG  1850

Query 1851  ACTGTTCCTCGTGTCTACACACACTGGTGAGGTGCGCACAGCCCGGGCCTTACTGGAGGATGACTCTGACACCC  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  ACTGTTCCTCGTGTCTACACACACTGGTGAGGTGCGCACAGCCCGGGCCTTACTGGAGGATGACTCTGACACCC  1924

Query 1925  AGCAGGTGGTGGTCCTGGTGAGGGACAATGGTGACCCTTCACTCTCCTCCACAGCCACAGTGCTGCTGGTTCTG  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  AGCAGGTGGTGGTCCTGGTGAGGGACAATGGTGACCCTTCACTCTCCTCCACAGCCACAGTGCTGCTGGTTCTG  1998

Query 1999  GAGGATGAGGACCCTGAGGAAATGCCCAAATCCAGTGACTTCCTCATACACCCTCCTGAGCGTTCAGACCTTAC  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  GAGGATGAGGACCCTGAGGAAATGCCCAAATCCAGTGACTTCCTCATACACCCTCCTGAGCGTTCAGACCTTAC  2072

Query 2073  CCTTTACCTCATTGTGGCTCTAGCGACCGTCAGTCTCTTATCCCTAGTCACCTTCACCTTTCTGTCAGCTAAGT  2146
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 2073  CCTTTACCTCATTGTGGCTCTAGCGACCGTCAGTCTCTTATCCCTAGTCACCTTCACCTTTCTGTCAGCGAAGT  2146

Query 2147  GCCTTCAGGGAAACGCAGACGGGGACGGGGGTGGAGGGCAGTGCTGCAGGCGCCAGGACTCACCCTCCCCGGAC  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  GCCTTCAGGGAAACGCAGACGGGGACGGGGGTGGAGGGCAGTGCTGCAGGCGCCAGGACTCACCCTCCCCGGAC  2220

Query 2221  TTCTATAAGCAGTCCAGCCCCAACCTGCAGGTGAGCTCGGACGGCACGCTCAAGTACATGGAGGTGACGCTGCG  2294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  TTCTATAAGCAGTCCAGCCCCAACCTGCAGGTGAGCTCGGACGGCACGCTCAAGTACATGGAGGTGACGCTGCG  2294

Query 2295  GCCCACAGACTCGCAGAGCCACTGCTACAGGACGTGCTTTTCACCGGCCTCGGACGGCAGTGACTTCACTTTTC  2368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  GCCCACAGACTCGCAGAGCCACTGCTACAGGACGTGCTTTTCACCGGCCTCGGACGGCAGTGACTTCACTTTTC  2368

Query 2369  TAAGACCCCTCAGCGTTCAGCAGCCCACAGCTCTGGCGCTGGAGCCTGACGCCATCCGGTCCCGCTCTAATACG  2442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  TAAGACCCCTCAGCGTTCAGCAGCCCACAGCTCTGGCGCTGGAGCCTGACGCCATCCGGTCCCGCTCTAATACG  2442

Query 2443  CTGCGGGAGCGGAGCCAGGTGAGGGGCTC-GGCGCCGCCC----CGG----------------------GCGAC  2489
            ||||||||||||||||||          | .||.||||||    |||                      |.|||
Sbjct 2443  CTGCGGGAGCGGAGCCAG----------CAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGAC  2506

Query 2490  CCCTGGGG-----GCGGC------ACTGGAGAAG---CCG---CCCGTCCTCATA-------------AGGGAT  2533
            ||    ||     |||||      |.|||.||.|   |||   ||.|.||..|.|             ||.|||
Sbjct 2507  CC----GGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGAT  2576

Query 2534  -----------TGAACTT-GCATCCACTCCTCTCCGGCCGGCTTGGTCGCTG--GCTGC--------GCTCCAC  2585
                       |||.||| ||.|||           |||.|         ||  |||||        |||||||
Sbjct 2577  GCTGCAAGCCATGATCTTGGCGTCC-----------GCCAG---------TGAAGCTGCTGATGGGAGCTCCAC  2630

Query 2586  CC--------GATTCTCGGGATCATTGGACCGTTTGCGCG--------GAACCAGA----------------GT  2627
            ||        |.|.| |||.|.|||.|||    |||.|||        |.|||..|                ||
Sbjct 2631  CCTGGGAGGGGGTGC-CGGCACCATGGGA----TTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCACGT  2699

Query 2628  GGCCGAT-------------------------------------------------------------------  2634
            |.||||.                                                                   
Sbjct 2700  GCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATG  2773

Query 2635  -----------------------------------------------------------  2634
                                                                       
Sbjct 2774  GCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAG  2832

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.