Nucleotide Global Alignment

Description

Query:
TRCN0000481022
Subject:
NR_003265.3
Aligned Length:
2336
Identities:
1470
Gaps:
796

Alignment

Query    1  ----------------------------------------------------------ATGTCGGGGGTCCGGG  16
                                                                      .|||||||||||||||
Sbjct    1  GGTGCGCAGGCGCAGTCTGCGCAGGGACTGGCGGGACTGCGCGGCGGCGACTACAGACGTGTCGGGGGTCCGGG  74

Query   17  GCCTGTCGCGGCTGCTGAGCGCTCGGCGC------CTGGCGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACA  84
            |||||||||||.|||..||||||||||||      |||||||||||||||||||||||||||||||||||||||
Sbjct   75  GCCTGTCGCGGTTGCCAAGCGCTCGGCGCTTGGCGCTGGCGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACA  148

Query   85  GGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATTCCATTTCTGC  158
            ||||||||||||.|||||||||||||||| .|||||.|||||||||||||||||||||||||||||||||||||
Sbjct  149  GGAACCCGAGGTGTTCACTTCACTGTTGA-AGGAACGAGAGGGCATCTGCTAAAGTTTCAGATTCCATTTCTGC  221

Query  159  TCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCA  231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  222  TCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGCTTTGCGAGCTGCA  295

Query  232  TTTGGCCTTTCTGAGGCAGGGTTTAATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGC  305
            |||||||||||.|||||||.||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  296  TTTGGCCTTTCCGAGGCAGAGTTTGATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGC  369

Query  306  AGCGCAGGGAGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTA--------  371
            ||||||||..||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct  370  AGCGCAGGTTGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTATGACACCG  443

Query  372  --------------------------------------------------------------------------  371
                                                                                      
Sbjct  444  TGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACGTGACGGAGCAGGCCCCCACTGCCATGGTC  517

Query  372  --------------------------------------------------------------------------  371
                                                                                      
Sbjct  518  GAGGTAGAAAATTATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGCGGACA  591

Query  372  --------------------------------------------------------------------------  371
                                                                                      
Sbjct  592  CAGCCTCAAGTTTGGAAAGGGCAGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCAATAT  665

Query  372  --------------------------------------------------------------------------  371
                                                                                      
Sbjct  666  TGCACACCTTATATGGGAGGTCTCTGCGATATGATACCAGCTGTTTTGTGGAGTATTTTGCCTTGGATCTCCTG  739

Query  372  --------------------------------------------------------------------------  371
                                                                                      
Sbjct  740  ATGGAGAATGGGGAGTGCCGTGGTGTCTTCGCACTGTGCATACAGGACGGGTCCATCCATCGCATAAGAGCAAA  813

Query  372  -------------------------------------------------------CGACACCAGCACTGGCGAC  390
                                                                   |.||||||||||..|||||
Sbjct  814  GAATACTATTGTTGCCACAGGGCTACGGGCGCACCTACTTGAGCTGCACGTCTGCCCACACCAGCACCAGCGAC  887

Query  391  GGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTTGTTCAGTTCCACCCCACAGGCAT  464
            ||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||.
Sbjct  888  GGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTCGAGTTTGTTCAGTTCCACCCCACAGGCAC  961

Query  465  ATATGGTGCTGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAA  538
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  962  ATATGGTGCTGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAA  1035

Query  539  GGTTTATGGAGCGATACGCCCCTGTCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCGATGACTCTG  612
            ||||||||||||||||||||||..|||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1036  GGTTTATGGAGCGATACGCCCCCATCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTGGATGACTCTG  1109

Query  613  GAGATCCGAGAAGGAAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCAGA  686
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110  GAGATCCGCGAAGGAAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCAGA  1183

Query  687  GCAGCTGGCCACGCGCCTGCCTGGCATTTCAGAGACAGCCATGATCTTTGCTGGCGTGGACGTCACGAAGGAGC  760
            |||||||||||.||.|.||||.||||||||||||||||||||||||||.|||||.|||||||||||||||||||
Sbjct 1184  GCAGCTGGCCATGCCCTTGCCCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGAGC  1257

Query  761  CGATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTCCTGAGG  834
            ||||||||||||||||||||||||||||||||||||.||||||||||||||.||||.|||||||||||||||||
Sbjct 1258  CGATCCCTGTCCTCCCCACCGTGCATTATAACATGGACGGCATTCCCACCAGCTACGAGGGGCAGGTCCTGAGG  1331

Query  835  CACGTGAATGGCCAGGATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGG  908
            ||||.|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||.|.||||||
Sbjct 1332  CACGGGAATGGCCAGGATCAGATTGTGCCCAGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCTGCACATGG  1405

Query  909  TGCCAACCGCCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAG  982
            ||.||||||||||||||||||||||||.|||||||||||||||  |||||.||||||||||||||||||||.||
Sbjct 1406  TGTCAACCGCCTCGGGGCAAACTCGCTGTTGGACCTGGTTGTC--TGGTCAGGCATGTGCCCTGAGCATCGCAG  1477

Query  983  AGTCATGCAGGCCTGGAGATAAAGTCCCTCCAATTAAACCAAACGCTGGGGAAGAATCTGTCATGAATCTTGAC  1056
            ||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||.||||||||||
Sbjct 1478  AGTCGTGCAGGCCTGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCACGAATCTTGAC  1551

Query 1057  AAATTGAGATTTGCTGATG---GAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGTCAATGCAAAA  1127
            |||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1552  AAATTGAGATTTGCTGATGGAAGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGTCAACGCAAAA  1625

Query 1128  TCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGCTCTATGGAGACC  1201
            ||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626  TCATGCTGCCGTGTTCCGTGTGGGAAGCTTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGCTCTATGGAGACC  1699

Query 1202  TAAAGCACCTGAAGACGTTCGACCGGGGAATGGTCTGGAACACAGACCTGGTGGAGACCCTGGAGCTGCAGAAC  1275
            |.|||||.|||||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1700  TGAAGCATCTGAAGACGTTTGACCGGGGAATGGTCTGGAACACGGACCTGGTGGAGACCCTGGAGCTGCAGAAC  1773

Query 1276  CTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCACGGGGCGCGCATGCCAGGGA  1349
            ||||||||.|||||||||||||||.||.|.||||||||||||.||||||||||||||||||||||.|||.||||
Sbjct 1774  CTGATGCTATGTGCGCTGCAGACCGTCAATGGAGCAGAGGCGGGGAAGGAGTCACGGGGCGCGCACGCCGGGGA  1847

Query 1350  AGACTACAAGGTGCGGATTGATGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGG  1423
            ||||||||||||||.||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1848  AGACTACAAGGTGCAGATTGATGAGTATGATCACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGG  1921

Query 1424  AGCACTGGAGGAAGCACACCCTGTCCTTTGTGGACGTTGGCACTGGGAAGGTCACTCTGGAATATAG-------  1490
            .||||||||||||||||||||||||||.|||||||||.||||||||||||..|||          ||       
Sbjct 1922  TGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTCGGCACTGGGAAGTGCAC----------AGCCAGAGG  1985

Query 1491  ---ACCCGTAATCGACA------AAAC-----------TTTGAACGAGGC-------------------TGACT  1525
               ||.|   ||| |||      ||||           |.|||..|.|||                   .||||
Sbjct 1986  ACAACAC---ATC-ACACACAAGAAACAGTTGTGCTCATGTGATGGGGGCCTCAGCACTAGGAAGGAGTGGACT  2055

Query 1526  GT--GC-CAC-----------------------CGTCCC-----------------GCC------AGC-CAT--  1547
            ||  || |||                       .|||.|                 |||      ||| |||  
Sbjct 2056  GTTGGCGCACGCAGCAGCTTGAATAAATCTGAAAGTCACTACGCTGCGTAAGAGAAGCCAAATAAAGCGCATGC  2129

Query 1548  ---------------TCG-------CTCCTAC------------------------------------------  1557
                           |||       |||||||                                          
Sbjct 2130  TGTGTACAGAGGGTGTCGAGAATGCCTCCTACGTGACGGAAAGCAGATCCGTGGTTCCCTGCAGACTGGCAGGA  2203

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2204  GCAGATTCCAAAGGCACAGGAAGAAGCTTGCAGGTAGAATGTGTTCATTACCTTCTGCGCATTATACCACAAAA  2277

Query 1558  ------------------------------------------  1557
                                                      
Sbjct 2278  AAGCTGGGAATAAAAATGCTAACCAAAAAAAAAAAAAAAAAA  2319

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