Nucleotide Global Alignment

Description

Query:
TRCN0000481616
Subject:
NM_001364158.1
Aligned Length:
1756
Identities:
973
Gaps:
509

Alignment

Query    1  ATGTTTGGGATTCAGGAGAATATTCCGCGCGGGGGGACGACCATGAAGGAGGAGCCGCTGGGCAGCGGCATGAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCGGTGCGCTCGTGGATGCACACGGCGGGCGTGGTGGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCTGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CGCGGGCGCACTTCGAGAAGCAGCCGCCTTCCAACCTCCGGAAATCCAATTTCTTCCACTTCGTGCTGGCGCTC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TACGATAGGCAGGGGCAGCCGGTGGAGATTGAAAGGACCGCTTTTGTGGACTTTGTGGAGAAAGAGAAAGAGCC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AAACAACGAGAAAACCAACAACGGCATCCACTATAAACTCCAGTTATTGTACAGCAACGGAGTCAGAACAGAGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AAGATCTGTATGTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTACGAGGGCCAGGACAAGAACCCG  444
                                         |||||.|||||.|||||.||.||.||.|||||.|||||||||||.
Sbjct    1  -----------------------------ATGACAAAACAAGCCATAGTGTATGAAGGCCAAGACAAGAACCCA  45

Query  445  GAGATGTGCCGTGTGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCTGTGACAAGAAAAGTTGTGGCAATAG  518
            ||.||||||||.||..||||.||.||.|||||||||||||||||.||.||||||||||||||.||||||||..|
Sbjct   46  GAAATGTGCCGAGTCTTGCTCACACATGAGATCATGTGCAGCCGCTGTTGTGACAAGAAAAGCTGTGGCAACCG  119

Query  519  AAACGAAACGCCCTCAGACCCTGTAATCATTGACAGATTCTTTCTAAAGTTTTTCCTCAAGTGCAATCAGAACT  592
            |||.||.||.||||||||.||.||.||.||||||||.|||||..|.||.|||||||||||.||.||.||.||.|
Sbjct  120  AAATGAGACTCCCTCAGATCCAGTGATAATTGACAGGTTCTTCTTGAAATTTTTCCTCAAATGTAACCAAAATT  193

Query  593  GTTTGAAGAATGCAGGCAACCCTCGAGATATGCGGAGATTCCAGGTTGTTGTATCGACAACAGTCAACGTGGAC  666
            |..|.||||||||.||.|||||.||.||.|||||||||||||||||.||.||.||.||.||||||||.|||||.
Sbjct  194  GCCTAAAGAATGCGGGAAACCCACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTACGACAGTCAATGTGGAT  267

Query  667  GGCCACGTGCTGGCCGTGTCAGACAACATGTTTGTGCACAACAATTCCAAACACGGGAGGCGGGCCCGCCGCCT  740
            |||||.||.|||||.||.||.||.|||||||||||.||.||.||||||||.||.|||.||.||||.||..|.||
Sbjct  268  GGCCATGTCCTGGCAGTCTCTGATAACATGTTTGTCCATAATAATTCCAAGCATGGGCGGAGGGCTCGGAGGCT  341

Query  741  AGACCCGTCAGAAGCCACTCCGTGCATCAAGGCCATCAGTCCCAGTGAAGGCTGGACCACGGGGGGTGCCACCG  814
            .|||||.||.|||||.|||||.||.|||||.||||||||.||.||||||||.|||||.|||||.|||||.||.|
Sbjct  342  TGACCCCTCGGAAGCTACTCCCTGTATCAAAGCCATCAGCCCGAGTGAAGGATGGACGACGGGAGGTGCGACTG  415

Query  815  TCATCATAATTGGCGACAACTTCTTTGACGGGCTGCAAGTTGTATTCGGAACTATGTTGGTGTGGAGCGAGCTG  888
            |.|||||.||.||.|||||.||||||||.|||.|.||.||..|||||||.||.|||.||||.|||||.|||.||
Sbjct  416  TGATCATCATAGGGGACAATTTCTTTGATGGGTTACAGGTCATATTCGGTACCATGCTGGTCTGGAGTGAGTTG  489

Query  889  ATAACTCCCCATGCCATCCGAGTCCAGACCCCGCCGAGGCACATTCCTGGCGTCGTCGAAGTGACCCTCTCCTA  962
            ||.|||||.|||||||||||.||.||||||||.||..|||||||.|||||.||.||.|||||.||.||.|||||
Sbjct  490  ATCACTCCTCATGCCATCCGTGTGCAGACCCCTCCTCGGCACATCCCTGGTGTTGTGGAAGTCACACTGTCCTA  563

Query  963  CAAATCCAAGCAGTTCTGCAAAGGTGCTCCTGGGCGCTTTGTCTACACCGCCCTTAATGAACCAACCATAGATT  1036
            ||||||.|||||||||||||||||..|.||.||..|.||..|.||.||.||.||.||.|||||.|||||.||||
Sbjct  564  CAAATCTAAGCAGTTCTGCAAAGGAACACCAGGCAGATTCATTTATACAGCGCTCAACGAACCCACCATCGATT  637

Query 1037  ACGGCTTTCAGAGGTTGCAGAAAGTGATCCCAAGACATCCGGGTGATCCCGAAAGGTTACCCAAGGAGGTGTTA  1110
            |.||.||.||||||||.|||||.||.||.||..|.||.||.|||||.||.||..|.||.||.|||||.||..||
Sbjct  638  ATGGTTTCCAGAGGTTACAGAAGGTCATTCCTCGGCACCCTGGTGACCCTGAGCGTTTGCCAAAGGAAGTAATA  711

Query 1111  CTGAAGCGGGCGGCGGACCTGGTGGAAGCCTTATACGGAATGCCTCACAACAACCAGGAGATCATCTTGAAGCG  1184
            ||.||..||||.|||||.|||||.|||||..|.||.||.|||||.||||||||||||||.|||||..|||||.|
Sbjct  712  CTCAAAAGGGCTGCGGATCTGGTAGAAGCACTGTATGGGATGCCACACAACAACCAGGAAATCATTCTGAAGAG  785

Query 1185  AGCGGCGGACATCGCCGAGGCGCTGTACAGCGTTCCCCGCAATCACAACCAGATCCCCACCCTGGGCAACAACC  1258
            ||||||.|||||.||||||||.||||||||.|||||||||||.||||||||..||||..||||.|..||||.|.
Sbjct  786  AGCGGCCGACATTGCCGAGGCCCTGTACAGTGTTCCCCGCAACCACAACCAACTCCCGGCCCTTGCTAACACCT  859

Query 1259  CTGCACACACGGGCATGATGGGCGTCAACTCCTTCAGCAGCCAGCTAGCCGTCAACGTGTCAGAGACGTCACAA  1332
            |.|..|||.|.||.|||||||||||.||.||.|||||..|.||.||.|||||.||.||.||.|||.|.||||||
Sbjct  860  CGGTCCACGCAGGGATGATGGGCGTGAATTCGTTCAGTGGACAACTGGCCGTGAATGTCTCCGAGGCATCACAA  933

Query 1333  GCCAACGACCAAGTC--GGCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAGGCTACGTCCCCAGCAGTACT  1404
            |||    ||||| ||  ||.|.||..|||||..||||||||||.||.||.|..||.|||||.||.||||..|||
Sbjct  934  GCC----ACCAA-TCAGGGTTTCACCCGCAACTCAAGCAGCGTATCACCACACGGGTACGTGCCGAGCACCACT  1002

Query 1405  CCCCAGCAGTCCAATTACAACACAGTCAGCACTAGCATGAATGGATATGGAAGTGGCGCCATGGCCAGTCTAG-  1477
            |||||||||.||||.||.|||.|.||||.|||.||||||||.|||||.||...||.|||.|||.|||.|.|.| 
Sbjct 1003  CCCCAGCAGACCAACTATAACTCCGTCACCACGAGCATGAACGGATACGGCTCTGCCGCAATGTCCAATTTGGG  1076

Query 1478  -GGGTCCC-------------TGGCTCGCCTG-----------GATTTCTTA------------------ATGG  1508
             ||.||||             .|||||..|||           .||..|.||                  ||||
Sbjct 1077  CGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCCTATGCCATAGTGCCATCCAGCCCCACCATGG  1150

Query 1509  -CTCCTCCGCTAA--CTCTCCCT---ACGGCA------------------------------------------  1534
             |||||||.| ||  ||| ||||   ||.|||                                          
Sbjct 1151  CCTCCTCCAC-AAGCCTC-CCCTCCAACTGCAGCAGCTCCTCGGGCATCTTCTCCTTCTCACCAGCCAACATGG  1222

Query 1535  ---------TGAAACAGAAGAGCGCCTTCGCGCCCGTGGTCCGGCCCCAAGCCTCTCCTCCTCCTTCCTGCACC  1599
                     |||||||||||||.||.|||||.||.||.|||.|.|||||..||||.||.|||||..||||||||
Sbjct 1223  TCTCAGCCGTGAAACAGAAGAGTGCTTTCGCACCAGTCGTCAGACCCCAGACCTCCCCACCTCCCACCTGCACC  1296

Query 1600  AGCGCCAACGGGAATGGACTGCAAGCTATGTCTGGGCTGGTAGTCCCGCCAATG  1653
            |||.||||||||||..|.||||||||.||.|||||..||.|.||.||.||.|||
Sbjct 1297  AGCACCAACGGGAACAGCCTGCAAGCGATATCTGGCATGATTGTTCCTCCTATG  1350

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