Nucleotide Global Alignment

Description

Query:
TRCN0000487884
Subject:
XR_933923.3
Aligned Length:
4471
Identities:
1216
Gaps:
3250

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACAGCGCGATGGCGGCGGCTCCTTTAGGCAGCTGAAAGGGGATTTAGGCCCGGAAGATCCGAGTCCATCCGCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGGGAGAGGGCAAGCGGGACCGGTAGGGGCCGGAGCAGCGGCGGCGGCGCTCGGACTGTCCCATCCGCCCCGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATTGAGGCGCTGGGAGCGGCGGGGCGACAGGAAAGCGATGGTGAAAGCGGGGCCGTGAGGGGGGCGGAGCCGGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGCCGGACCCGCAGTAGCGGCAGCAGCGGCGCCGCCTCCCAGAGTTCAGACCCAGGAAGCGGCCGGGAGGGCAG  296

Query    1  -----------------------ATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGC  51
                                   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAGCGAATCGGGCCGCCGCCGCCATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGC  370

Query   52  GGCTCCTTCGGAGACATCTATCTCGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGT  125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGCTCCTTCGGAGACATCTATCTCGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGT  444

Query  126  CAAAACCAAACACCCTCAGCTCCACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCA  199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CAAAACCAAACACCCTCAGCTCCACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCA  518

Query  200  CCATCAGATGGTGCGGGGCAGAGGGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGAC  273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCATCAGATGGTGCGGGGCAGAGGGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGAC  592

Query  274  CTCTTCAACTTCTGCTCCAGGAAATTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCAT  347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTCTTCAACTTCTGCTCCAGGAAATTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCAT  666

Query  348  CGAATACATTCATTCAAAGAACTTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGA  421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CGAATACATTCATTCAAAGAACTTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGA  740

Query  422  AGGGCAACCTGGTGTACATCATCGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATC  495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGGGCAACCTGGTGTACATCATCGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATC  814

Query  496  CCCTATCGTGAGAACAAGAACCTCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACA  569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCCTATCGTGAGAACAAGAACCTCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACA  888

Query  570  ATCCCGAAGAGATGACTTGGAGTCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGG  643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ATCCCGAAGAGATGACTTGGAGTCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGG  962

Query  644  GGCTGAAGGCTGCCACCAAGAGACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTG  717
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGCTGAAGGCTGCCACCAAGAGACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTG  1036

Query  718  TTGTGTAAAGGCTACCCTTCCGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCC  791
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TTGTGTAAAGGCTACCCTTCCGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCC  1110

Query  792  TGACTACTCGTACCTGCGGCAGCTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCG  865
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TGACTACTCGTACCTGCGGCAGCTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCG  1184

Query  866  ACTGGAACATGCTCAAATTT------------------------------------------------------  885
            ||||||||||||||||||||                                                      
Sbjct 1185  ACTGGAACATGCTCAAATTTGTTGCTGTCTCGGCTTAAAATCTGACCTCCCCACCCCCGTGCATCTGGATAGTG  1258

Query  886  --------------------------------------------------------------------------  885
                                                                                      
Sbjct 1259  CAGCACAGATCCGGCTGCCGGCTGCTGGCCACGCCACCACACCTGCACAGGCTGTTGGAGGCTGCAGGGTCCGG  1332

Query  886  --------------------------------------------------------------------------  885
                                                                                      
Sbjct 1333  ACCCTGAGTGTACTCCTCGTCCGACCAAACGCTCTCATCCCCACCCCGCTTTCCTCCCCAGCTGTCACCATTTG  1406

Query  886  --------------------------------------------------------------------------  885
                                                                                      
Sbjct 1407  GGGCCTGTCTTTGGCCTCCGATGGTTCCTGTCCCTCTCCTCTTTCTGCACGTGTTAGTGAGCATGTTCACAGAG  1480

Query  886  --------------------------------------------------------------------------  885
                                                                                      
Sbjct 1481  CAGCAGGGGGTAGCTGCTGCCCATTTGGAAGTTTAAGGAAGTTCTGAGCCCACAGGGAGATGCCATGGCGAGTG  1554

Query  886  --------------------------------------------------------------------------  885
                                                                                      
Sbjct 1555  GGGTTTTTTCGATTGTTGGGGGAGCTGAGAGGCCTGGCTCTGACCCCTTGTGGGGATGATGCTGTCATCCCATG  1628

Query  886  ----------------------------------------------------------GGTGCCAGCCGGGCCG  901
                                                                      ||||||||||||||||
Sbjct 1629  AGGAGAAACGTGCAGCCTGTGGGGGGCTTTGCAGGCAGTCTCGTCCCAGTGCCCTTTGGGTGCCAGCCGGGCCG  1702

Query  902  CCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAGCGGCTGAGACACTCGCGGAACCCGGCTACCCGCGGC  975
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAGCGGCTGAGACACTCGCGGAACCCGGCTACCCGCGGC  1776

Query  976  CTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCAGGAAGTGGCTCCCCCCACACCCCTCACCCCTACCTC  1049
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCAGGAAGTGGCTCCCCCCACACCCCTCACCCCTACCTC  1850

Query 1050  ACACACGGCTAACACCTCCCCCCGGCCCGTCTCCGGCATGGAGAGAGAGCGGAAAGTGAGTATGCGGCTGCACC  1123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  ACACACGGCTAACACCTCCCCCCGGCCCGTCTCCGGCATGGAGAGAGAGCGGAAAGTGAGTATGCGGCTGCACC  1924

Query 1124  GCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACAGGCCGACAAGATACCTCTCGCATGTCCACCTCACA-  1196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct 1925  GCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACAGGCCGACAAGATACCTCTCGCATGTCCACCTCACAG  1998

Query 1197  GAATAGCATTCCT----------TTCGAACACCACGGCAAGG--------------------------------  1228
            ||.|||   .|||          .|||.||    ||||.|||                                
Sbjct 1999  GACTAG---GCCTGAGCCCTGTCGTCGTAC----CGGCGAGGATGTGCGTCTCCCCTGCCTTCAGGCTGTGCCC  2065

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2066  TGAGACCCAGTTGTGGGGCTGCCCAGCACCTGCCATCCTGCTGGGATCAGGTTTTCTTAGTGCTTGAGAAGACT  2139

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2140  CAGGAGGGCCTGTCCCATGCCATTGTTGGCCTTAAGAGCAAGTGATTCCAGAAGAGGAGTGGGCACCACTCTCA  2213

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2214  TCCAGAGGCCCGTCCTGAGAGAATAGCATTCCTTTCGAACACCACGGCAAGTAGCTGCTCGTCTCCCATCGGAA  2287

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2288  GGCAGCACTGGATTCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGATGAGAACTCTCCTTA  2361

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2362  TTGCTGTGAAGGGCAGACAATGCATGGCTGATCTACTCTGTTACCAATGGCTTTACTAGTGACACGTCCCCCGG  2435

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2436  TCTAGGATCGAAATGTTAACACCGGGAGCTCTCCAGGCCACTCACCCAGCGACGCTCGTGGGGGAAACATACTA  2509

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2510  AACGGACAGACTCCAAGAGCTGCCACCGCTGGGGCTGCACTGCGGCCCCCCACGTGAACTCGGTTGTAACGGGG  2583

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2584  CTGGGAAGAAAAGCAGAGAGAGAATTGCAGAGAATCAGACTCCTTTTCCAGGGCCTCAGCTCCCTCCAGTGGTG  2657

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2658  GCCGCCCTGTACTCCCTGACGATTCCACTGTAACTACCAATCTTCTACTTGGTTAAGACAGTTTTGTATCATTT  2731

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2732  TGCTAAAAATTATTGGCTTAAATCTGTGTAAAGAAAATCTGTCTTTTTATTGTTTCTTGTCTGTTTTTGCAGTC  2805

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2806  TTACAAAAAAAATGTTGACTAAGGAATTCTGAGACAGGCTGGCTTGGAGTTAGTGTATGAGGTGGAGTCGGGCA  2879

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2880  GGGAGAAGGTGCAGGTGGATCTCAAGGGTGTGTGCTGTGTTTGTTTTGCAGTGTTTTATTGTCCGCTTTGGAGA  2953

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 2954  GGAGATTTCTCATCAAAAGTCCGTGGTGTGTGTGTGTGCCCGTGTGTGGTGGGACCTCTTCAACCTGATTTTGG  3027

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3028  CGTCTCACCCTCCCTCCTCCCGTAATTGACATGCCTGCTGTCAGGAACTCTTGAGGCCCTCGGAGAGCAGTTAG  3101

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3102  GGACCGCAGGCTGCCGCGGGGCAGGGGTGCAGTGGGTGTTACCAGGCAAAGCACTGCGCGCTTCTTCCCCAGGA  3175

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3176  GGTGGGCAGGCAGCTGAGAGCTTGGAAGCAGAGGCTTTGAGACCCTAGCAGGACAATTGGGAGTCCCAGGATTC  3249

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3250  AAGGTGGAAGATGCGTTTCTGGTCCCTTGGGAGAGGACTGTGAACCGAGAGGTGGTTACTGTAGTGTTTGTTGC  3323

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3324  CTTGCTGCCTTTGCACTCAGTCCATTTTCTCAGCACTCAATGCTCCTGTGCGGATTGGCACTCCGTCTGTATGA  3397

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3398  ATGCCTGTGCTTAAAACCAGGAGCGGGGCTGTCCTTGCCACGTGCCAAGACTAGCTCAGAAAAGCCGGCAGGCC  3471

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3472  AGAAGGACCCACCCTGAGGTGCCAAGGAGCAGGTGACTCTCCCAACCGGACCCAGAACCTTCACGGCCAGAAAG  3545

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3546  TAGAGTCTGCGCTGTGACCTTCTGTTGGGCGCGTGTCTGTTGGTCAGAAGTGAAGCAGCGTGCGTGGGGCCGAG  3619

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3620  TCCCACCAGAAGGCAGGTGGCCTCCGTGAGCTGGTGCTGCCCCAGGCTCCATGCTGCTGTGCCCTGAGGTTCCC  3693

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3694  AGGATGCCTTCTCGCCTCTCACTCCGCAGCACTTGGGCGGTAGCCAGTGGCCATGTGCTCCCAACCCCAATGCG  3767

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3768  CAGGGCAGTCTGTGTTCGTGGGCACTTCGGCTGGACCCCATCACGATGGACGATGTTCCCTTTGGACTCTAGGG  3841

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3842  CTTCGAAGGTGTGCACCTTGGTTCTCCCTTCTCCTCCCCAGAGTTCCCCGGATGCCATAACTGGCTGGCGTCCC  3915

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3916  AGAACACAGTTGTTCACCCCCCCACCAGCTGGCTGGCCGTCTGCCTGAGCCCATGGATGCTTTCTCAATCCTAG  3989

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 3990  GCTGGTTACTGTGTAAGCGTTTTGGAGTACGGGGCCTTGAGCGGGTGGGAGCTGTGTGTTGAAGTACAGAGGGA  4063

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 4064  GGTTGGGGTGGGTCAGAGCCGAGTTAAGAGATTTTCTTTGTTGCTGGACCCCTTCTTGAAGGTAGACGTCCCCC  4137

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 4138  ACCCGGAGAGACGTCGCGCTGTGGCCTGAAGTGGCGCAAGCTTGCTTTGTAAATATCTGTGGTCCCGATGTAGT  4211

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 4212  GCCCAGAACGTTTGTGCGAGGCAGCTCTGCGCCCGGGTTCCAGCCCGAGCCTCGCCGGGTCGCGTCTTCGGAGT  4285

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 4286  GCTTGTGACAGTCCTTGCCCAGTATCTAGTCCCCGTCGCCCCGTGCAGGAGACGTAGGTAGGACGTCGTGTCAG  4359

Query 1229  --------------------------------------------------------------------------  1228
                                                                                      
Sbjct 4360  CTGTGCACTGACGGCCAGTCTCCGAGCTGTGCGTTTGTATCGCCACTGTATTTGTGTACTTTAACAATCGTGTA  4433

Query 1229  -------------------------------  1228
                                           
Sbjct 4434  AATAATAAATTCATAATGACTTCTACCTTTC  4464

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