Nucleotide Global Alignment

Description

Query:
TRCN0000488029
Subject:
XM_006530722.2
Aligned Length:
2818
Identities:
1829
Gaps:
761

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGTCCCCTCTCGCAGGACGTGGAACTTGGGAGCCACGCCTTCACTGCGAGGCCTGTGGAGAGTGGGCCGGGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCAGGAGCCCAAGCCCGGGATGGCTCGCCCCGCCCCAGCCAGCCCAGCCGCCCGCCCTTTCCCACACACCGGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGGGAGGTTGAGAACTGGGCGTGGAAAAGATATTCTACCCAGTGGCGAGGAAGACTCCACTTCTCGGACTGCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTCGCCCGTCTCTTGCACAGTGTCGAGCCCTCAGCGTGGACTGGCCTGGCCCTAGGAGTCCCCATAGACTCTA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCTGACAGTGCAGCAGGCCCTGCGGGACAAGGGGTGCGAGAGCAAGAGTCAGGGGACGAAAGAAGACGAGCTCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CGAAGAGGCAGGCGCCGGCCCCCAGGCGGGACCGGGAGGCCCCAGAAGCTGGTGGTACCATGAATGTAGAAAAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACAGGTGGGCGGCTCTTTGGCATCGGGAGGTGCTCAAGCCTGTCCGGGGCACCAGGCCCAGACCCCGTGGTACA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TAGGACCGTGGAGGCCATGTCCCAGCTTCAGGAGGAGCTGGTAGTCCTTCGGGAGAGGCTGGCCCTCCACGACA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTGACCGGCAAGCCACAACCACCCAGCTGCAGAACCAGGTGGAGAATCTAAAGGAAAAGCTCATTAGCCAGGCC  666

Query    1  ------------------------------------------------------------------ATGGTGGA  8
                                                                              ||||||||
Sbjct  667  CAGGAAGTGAGCCGACTGCGATCAGAACTGGGAGGCACGGACGCGGAGAAGCACAGGGACAGACTGATGGTGGA  740

Query    9  GAATGAGCGACTGAGGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGT-  81
            ||||||||..||||||||||||.||.||||||||||||.|||.|||||.|||||.||..|    |||||.||| 
Sbjct  741  GAATGAGCAGCTGAGGCAGGAGCTGAGGCGCTGTGAGGTCGAACTGCAGGAGCTTCGGGC----CCAGCCGGTG  810

Query   82  ---CCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGA  152
               ||||||...||.|||||||||||||||||||||..|||||||||||||||||||||||||||||||.||||
Sbjct  811  GTGCCCTGCGAGGGCTGTGAGCACAGCCAGGAGAGCAGCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGTTGGA  884

Query  153  GATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCTGGCTGAGG  226
            ..||||.||.|.|||||||||||||||.||.||||||||.||||||||||||||.||.|||||||||||.||||
Sbjct  885  AGTGGCTGAGAACAAAGGCATGCTGTCGGAACTGAACCTGGAGGTGCAGCAGAAAACGGACCGGCTGGCAGAGG  958

Query  227  TGGAGCTGCGACTCAAGGACTGCCTGGCTGAGAAGGCACAGGAGGAGGAGCGGCTTAGTCGGCGCCTGCGTGAC  300
            |.||||||||.|||||||||||.|||||||||||.||.|||||||||||.|||||.||.|||||||||||||||
Sbjct  959  TAGAGCTGCGCCTCAAGGACTGTCTGGCTGAGAAAGCCCAGGAGGAGGAACGGCTCAGCCGGCGCCTGCGTGAC  1032

Query  301  AGCCACGAGACCATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGA  374
            |||||.|||||.||.|||||.|||.|||||||||||||||||||.||||||||||||||||||||||||||.||
Sbjct 1033  AGCCATGAGACTATCGCCAGTCTGAGGGCCCAGTCCCCACCTGTTAAGTATGTCATCAAGACAGTGGAGGTAGA  1106

Query  375  GTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTATGC  448
            |||.|||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||.|||||.||||
Sbjct 1107  GTCTTCCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGACCCGGAACCAGCACCTGCAGGAGCAAGTGGCCATGC  1180

Query  449  AGAGGCAGGTGCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCGCAG  522
            ||.||||||||||||||||||||||.||||||||.||||.|||.|||||||||||.|..|.|.|.|||||.|||
Sbjct 1181  AGCGGCAGGTGCTGAAGGAGATGGAGCAGCAGCTACAGAACTCCCACCAGCTGACAGTCCAGTTGCGGGCTCAG  1254

Query  523  ATTGCCATGTACGAGTCAGAGCTGGAGCGGGCCCATGGGCAGATGCTGGAGGAGATGCAGTCCCTGGAAGAGGA  596
            |||||||||||.|||.||||||||||||||||.||.|||||||||||||||||||||||||||.||||.|||||
Sbjct 1255  ATTGCCATGTATGAGGCAGAGCTGGAGCGGGCACACGGGCAGATGCTGGAGGAGATGCAGTCCTTGGAGGAGGA  1328

Query  597  CAAGAACCGGGCCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAG  670
            .|||||||||||||||||||||||||||||..|.||||||||||||||||||||.||.||||||||.||.||||
Sbjct 1329  TAAGAACCGGGCCATTGAGGAGGCCTTTGCACGGGCCCAGGTGGAGATGAAGGCAGTACACGAGAACCTGGCAG  1402

Query  671  GCGTCCGGACCAACTTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACCAACGACTACAATGGGCTCAAGCGG  744
            |.|||.||||||||.|||||||..|||||||.||.|||.|||||||||||||||||||||||||||||||||||
Sbjct 1403  GTGTCAGGACCAACCTGCTGACGCTGCAGCCTGCGCTGAGGACCCTCACCAACGACTACAATGGGCTCAAGCGG  1476

Query  745  CAGGTGCGCGTCTTCCCACTGCTGCTGCAGGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCAGGCCATCGA  818
            ||||||||.|.||||||..||||||||||||||||.||||||||||||||.||.|||||.||||||||||||||
Sbjct 1477  CAGGTGCGGGGCTTCCCCTTGCTGCTGCAGGAGGCTCTCAGGAGTGTCAAAGCTGAGATCGGCCAGGCCATCGA  1550

Query  819  GGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACA  892
            ||||||.||.||||||||||||||||||.||||||||||||||||.||.||.||||||||.|||||.|||||.|
Sbjct 1551  GGAGGTTAATAGCAACAACCAGGAGCTGTTGCGCAAGTACCGCCGGGAACTACAGCTGCGCAAGAAATGCCATA  1624

Query  893  ATGAGCTCGTGCGGCTGAAAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAA  966
            |.|||||.||.||||||||.||.||||||||.||||||||.||.|||||||||||||||||.||||||||.|||
Sbjct 1625  ACGAGCTGGTCCGGCTGAAGGGAAACATCCGGGTGATTGCCCGAGTCCGGCCAGTCACCAAGGAGGATGGAGAA  1698

Query  967  GGACCTGAGGCCACCAATGCTGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAA  1040
            |||||.|||||.||||||||||||||.||.||..|.||.||.||||||||||||||||||||||||||||||||
Sbjct 1699  GGACCCGAGGCAACCAATGCTGTGACCTTTGACCCTGATGATGACTCCATCATCCACCTGCTGCACAAGGGCAA  1772

Query 1041  GCCTGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGAGGTGCAGG  1114
            |||.||||||||||||||||||||||||||||||||...|||.||.||||||||||||||||||||||||||||
Sbjct 1773  GCCCGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCGTGGGCTTCCCAGCAGGACGTGTTCCAGGAGGTGCAGG  1846

Query 1115  CCCTGGTCACCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAAGACG  1188
            ||||..|.|||||.|||||.|||||||||||||||||.||||||||.|||||||||||.||.|||||||||||.
Sbjct 1847  CCCTCATTACCTCCTGCATCGATGGCTTCAATGTCTGTATCTTTGCTTACGGCCAGACAGGTGCCGGCAAGACA  1920

Query 1189  TACACGATGGAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGAGGTGCA  1262
            ||.||.|||||||||||..|.||||||||.||.||||||||||||||||||||||||||||||||.||||||||
Sbjct 1921  TATACAATGGAGGGGACTCCCGAGAACCCGGGCATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCGGAGGTGCA  1994

Query 1263  GGAGAAGGCGTCTGACTGGGAGTACACCATCACCGTCAGCGCTGCGGAGATCTACAATGAGGTCCTCAGGGACC  1336
            |||||||||||||||||||.||||||.|||||||||||||||.||.|||||.||||||||.|||||||||||||
Sbjct 1995  GGAGAAGGCGTCTGACTGGCAGTACAACATCACCGTCAGCGCAGCTGAGATTTACAATGAAGTCCTCAGGGACC  2068

Query 1337  TGCTAGGGAAAGAGCCTCAGGAAAAACTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATGTACCA  1410
            ||||.|||||||||||||||||.||.|||||||||||.||||||||.||.|||||||||||.||||||||.|||
Sbjct 2069  TGCTGGGGAAAGAGCCTCAGGAGAAGCTGGAGATCCGACTGTGCCCGGATGGCAGTGGGCAACTGTATGTGCCA  2142

Query 1411  GGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGGCCACACTAATCGCAC  1484
            |||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||.|||..||.|||||
Sbjct 2143  GGGCTGACTGAGTTCCAGGTGCAGAGCGTGGATGACATCAACAAGGTGTTTGAGTTTGGCTACAACAACCGCAC  2216

Query 1485  GACCGAGTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCACGCACTGCTCATCGTGACGGTGCGAGGCGTGG  1558
            .|||||||||||||||||||||||.||||||||||||||.|||||.||||||||||||||.|||.||||.||||
Sbjct 2217  CACCGAGTTCACCAACCTGAACGAACACAGCTCCCGCTCCCACGCTCTGCTCATCGTGACAGTGAGAGGTGTGG  2290

Query 1559  ACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACTTGGCTGGCTCGGAGCGCGTGGGCAAG  1632
            |.|||||||||||||||||||||||||||||||||||||||||||||.|||||||.||.|||||.|||||||||
Sbjct 2291  ATTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACCTGGCTGGTTCAGAGCGTGTGGGCAAG  2364

Query 1633  TCGGGGGCCGAGGGCAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCTGGGGGACGTCAT  1706
            ||||||||.|||||||.|||||||||.|||||.|||||||||||||.|||.||.||.||.||||||||||||||
Sbjct 2365  TCGGGGGCTGAGGGCAACCGCCTGCGAGAGGCACAGCACATCAACAGGTCACTATCCGCCCTGGGGGACGTCAT  2438

Query 1707  TGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGGATTCGC  1780
            ||||||||||||.||.||.||.|||||.||||||||||||||.|||||.||||||||||||||||||||.||.|
Sbjct 2439  TGCTGCCCTGCGTTCTCGACAAGGCCATGTGCCCTTCCGCAATTCCAAACTCACCTACCTGCTGCAGGACTCAC  2512

Query 1781  TTAGTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTAT  1854
            |.||||||||||||||||||||.||||||||||||||||||||.||||||||||||||.||||||||.||.||.
Sbjct 2513  TCAGTGGTGACAGCAAGACCCTTATGGTGGTACAGGTGTCCCCAGTGGAGAAGAACACCAGCGAGACTCTGTAC  2586

Query 1855  TCCCTCAAGTTTGCTGAGAGGGTGCGCTCTGTGGAGCTGGGGCCTGGGCTACGCAGGGCAGAGCTTGGGTCCTG  1928
            |||||||..||||||||||||||.||||||||||||.||||.||||||...|||.|..|||||||.||.|||||
Sbjct 2587  TCCCTCAGATTTGCTGAGAGGGTTCGCTCTGTGGAGTTGGGCCCTGGGTCCCGCCGCACAGAGCTGGGTTCCTG  2660

Query 1929  GTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGGGCCCACTCAGCCC  2002
            |||||||||||||||.||.|||||||||||||||||.|||||.||||||||..|.|||||.||||||||.||||
Sbjct 2661  GTCAAGCCAGGAGCACCTGGAGTGGGAGCCGGCTTGCCAGACACCACAGCCTACAGCACGAGCCCACTCTGCCC  2734

Query 2003  CCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGCCCTC-----------GGCC----  2061
            |..||||||||||||||||||||||.||.||||||||.|||||.||||||||.||           ||||    
Sbjct 2735  CTGGCTCTGGGACCAGTAGCCGCCCAGGTTCCATCCGAAGGAAACTGCAGCCGTCAGGGAAGTTGAGGCCAGTG  2808

Query 2062  ------  2061
                  
Sbjct 2809  CCTGTG  2814

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