Nucleotide Global Alignment

Description

Query:
TRCN0000488275
Subject:
XR_001745477.1
Aligned Length:
2604
Identities:
962
Gaps:
1642

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TCAGCGAGAGCTGCAAAGTTCCTTGCTATTCTTTTCTGGTGTCGGGGAGCTGAATATTAAAAGGGTGATTGTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGTTACCGGTTATCTGCATTTTTTTTTCTTTTCTTATTTTGACTCTTTTTAAAAAATGCAGGTAAAGTGACAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGTTCAGGAGCTTAAAGACATCAGTGGTGGAGGGGTGAGTCAGCGGGTGCAAAAGGACAAGGATTTGGTGCCTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGAGACACGGTCCCCTCTCCGCCTCCAGAGAAGAGCAGGCAGGCAGCTCCCGGGACCGAAGCCGGGTCCACATC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCCCGCGCGCGAGCTGGTGGCTCAGCAGCGGCGCTTCAGGTGGACGCGGTCAAACGATGCCCCGCAGCCTCCTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGTCTCAGCACATATTCCACACCTACGTCCCCTGACCTGTGCTCCTAGAAGCTGGAGAGAGCAGGAGCCTTCGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGGGGCAGCTCAAAATGTAGGTAACTGCGGGCCAGGAGCAGCGCCCAACCTGTAGCGCTGCGCTACCCAACCAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGGTCCCTGCCTTTGAGCGTCGACGGCTGATCTTTTGGTTTGAGGGAGAGACTGGCGCTGGAGTTTTGAATTCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAATCATGTGCAGAATGCTGAATCTTCCCCCAGCCAGGACGAATAAGACAGCGCGGAAAAGCAGATTCTCGTAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAGGGAGGGAGTCCGGGTCC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CGGGCTAGGCCAGCCCGGCAGGTGGAGAGGGTCCCCGGCAGCCCCGCGCGCCCCTGGCCATGTCTTTAATGCCC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGCCCCTTCATGTGGCCTTCTGAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGCTCTCAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGATTCCCGGCTCCCGCGCTCCCGCCTC  962

Query    1  -----------------------------------------------------------ATGGTGTTTCTCTCG  15
                                                                       |||||||||||||||
Sbjct  963  CGCGCCAGCCCGGGAGGTGGCCCTGGACAGCCGGACCTCGCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCG  1036

Query   16  GGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGG  89
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGG  1110

Query   90  GGTGATCTTGGGGGGCCTCATTCTTTTCGGGGTGCTGGGTAACATCCTAGTGATCCTCTCCGTAGCCTGTCACC  163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GGTGATCTTGGGGGGCCTCATTCTTTTCGGGGTGCTGGGTAACATCCTAGTGATCCTCTCCGTAGCCTGTCACC  1184

Query  164  GACACCTGCACTCAGTCACGCACTACTACATCGTCAACCTGGCGGTGGCCGACCTCCTGCTCACCTCCACGGTG  237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GACACCTGCACTCAGTCACGCACTACTACATCGTCAACCTGGCGGTGGCCGACCTCCTGCTCACCTCCACGGTG  1258

Query  238  CTGCCCTTCTCCGCCATCTTCGAGGTCCTAGGCTACTGGGCCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGC  311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CTGCCCTTCTCCGCCATCTTCGAGGTCCTAGGCTACTGGGCCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGC  1332

Query  312  AGTGGATGTGCTGTGCTGCACCGCGTCCATCATGGGCCTCTGCATCATCTCCATCGACCGCTACATCGGCGTGA  385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AGTGGATGTGCTGTGCTGCACCGCGTCCATCATGGGCCTCTGCATCATCTCCATCGACCGCTACATCGGCGTGA  1406

Query  386  GCTACCCGCTGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTCTCATGGCTCTGCTCTGCGTCTGGGCACTC  459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCTACCCGCTGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTCTCATGGCTCTGCTCTGCGTCTGGGCACTC  1480

Query  460  TCCCTGGTCATATCCATTGGACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGACGAGACCATCTGCCAGAT  533
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TCCCTGGTCATATCCATTGGACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGACGAGACCATCTGCCAGAT  1554

Query  534  CAACGAGGAGCCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTCTACCTGCCTCTGGCCATCATCCTGGTCA  607
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CAACGAGGAGCCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTCTACCTGCCTCTGGCCATCATCCTGGTCA  1628

Query  608  TGTACTGCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCG  681
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TGTACTGCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCG  1702

Query  682  GACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCGCCAA  755
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCGCCAA  1776

Query  756  GACCAAGACGCACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGAAGAAAGCGGCCAAAACGCTGGGCATCG  829
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GACCAAGACGCACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGAAGAAAGCGGCCAAAACGCTGGGCATCG  1850

Query  830  TGGTCGGCTGCTTCGTCCTCTGCTGGCTGCCTTTTTTCTTAGTCATGCCCATT---------------------  882
            |||||||||||||||||||||||||||||||||||||||||||||||||||||                     
Sbjct 1851  TGGTCGGCTGCTTCGTCCTCTGCTGGCTGCCTTTTTTCTTAGTCATGCCCATTGGGAAAAAAATGAAGAAACTT  1924

Query  883  --------------------------------------------------------------------------  882
                                                                                      
Sbjct 1925  AAGGTTCCATGGCCTGAGGAAGGCCACAGAAGGAAACTCACTTTGAGCTGAGCTTTGAGGGGCAGGAAGTACTA  1998

Query  883  --------------------------------------------------------------------------  882
                                                                                      
Sbjct 1999  GCTCAGCTGGAATGCACCCTCTGTTCATGATCTCCATGACGAAAATGAACTCATTGTGTAAGTGAGCTGGCCAT  2072

Query  883  ----------------GGGTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAGTTTTTAAAATAGTATTTTGGC  940
                            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  CTTCTCAGGAAGAAGAGGGTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAGTTTTTAAAATAGTATTTTGGC  2146

Query  941  TCGGATATCTAAACAGCTGCATCAACCCCATCATATACCCATGCTCCAGCCAAGAGTTCAAAAAGGCCTTTCAG  1014
            ||||||||||||||||||||||                                                    
Sbjct 2147  TCGGATATCTAAACAGCTGCAT----------------------------------------------------  2168

Query 1015  AATGTCTTGAGAATCCAGTGTCTCCGCAGAAAGCAGTCTTCCAAACATGCCCTGGGCTACACCCTGCACCCGCC  1088
                                                                                      
Sbjct 2169  --------------------------------------------------------------------------  2168

Query 1089  CAGCCAGGCCGTGGAAGGGCAACACAAGGACATGGTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACAGGA  1162
                                                                                      
Sbjct 2169  --------------------------------------------------------------------------  2168

Query 1163  TCTCCAAGACGGATGGCGTTTGTGAATGGAAATTTTTCTCTTCCATGCCCCGTGGATCTGCCAGGATTACAGTG  1236
                                                                                      
Sbjct 2169  --------------------------------------------------------------------------  2168

Query 1237  TCCAAAGACCAATCCTCCTGTACCACAGCCCGGGTGAGAAGTAAAAGCTTTTTGCAGGTCTGCTGCTGTGTAGG  1310
                                                                                      
Sbjct 2169  --------------------------------------------------------------------------  2168

Query 1311  GCCCTCAACCCCCAGCCTTGACAAGAACCATCAAGTTCCAACCATTAAGGTCCACACCATCTCCCTCAGTGAGA  1384
                                                                                      
Sbjct 2169  --------------------------------------------------------------------------  2168

Query 1385  ACGGGGAGGAAGTC  1398
                          
Sbjct 2169  --------------  2168

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