Nucleotide Global Alignment

Description

Query:
TRCN0000488574
Subject:
NR_024176.3
Aligned Length:
2762
Identities:
1198
Gaps:
1564

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTAGCACCGCCTCTTCCGCGTTCTCGGAGGAGCGATCTGCAGGTAGGGGTGCGCGCGACCGCTCCCCGGCGGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCCAGCGAAGGTTTCCATGTCAGAGGCCGATGGAGAACTGAAGATTGCCACCTACGCACAAAGGCCATTGAGAC  148

Query    1  ----------------------------------------------------------------------ATGG  4
                                                                                  ||||
Sbjct  149  ACTTCGTGTAGCTGGAAGACACCAACTTCCTGACAGGAGCTTTATTTCATTTGGGATTTCAAGTTTACAGATGG  222

Query    5  TATCTTCTCAAAAGTTGGAAAAACCTAT----------------------------------------------  32
            ||||||||||||||||||||||||||||                                              
Sbjct  223  TATCTTCTCAAAAGTTGGAAAAACCTATAGTTTCAGAAACAACTCTCCAAGTTCCATTTCCAAGGAAAGTCTTA  296

Query   33  -------------------------------------------------------AGAGATGGGCAGTAGCGAA  51
                                                                   |||||||||||||||||||
Sbjct  297  ACCATTTGTCCCTTCTGGCGTACCCTCTTTCATTGAAATCCATGCAGAATATACCAGAGATGGGCAGTAGCGAA  370

Query   52  CCCCTTCCCATCGCAGATGGTGACAGGAGGAGGAAGAAGAAGCGGAGGGGCCGGGCCACTGACTCCTTGCCAGG  125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCCCTTCCCATCGCAGATGGTGACAGGAGGAGGAAGAAGAAGCGGAGGGGCCGGGCCACTGACTCCTTGCCAGG  444

Query  126  AAAGTTTGAAGATATGTACAAGCTGACCTCTGAATTGCTTGGAGAGGGAGCCTATGCCAAAGTTCAAGGTGCCG  199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAAGTTTGAAGATATGTACAAGCTGACCTCTGAATTGCTTGGAGAGGGAGCCTATGCCAAAGTTCAAGGTGCCG  518

Query  200  TGAGCCTACAGAATGGCAAAGAGTATGCCGTCAAAATCATCGAGAAACAAGCAGGGCACAGTCGGAGTAGGGTG  273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGAGCCTACAGAATGGCAAAGAGTATGCCGTCAAAATCATCGAGAAACAAGCAGGGCACAGTCGGAGTAGGGTG  592

Query  274  TTTCGAGAGGTGGAGACGCTGTATCAGTGTCAGGGAAACAAGAACATTTTGGAGCTGATTGAGTTCTTTGAAGA  347
            |||||||||||||||||||||||||||||||||||||||||                                 
Sbjct  593  TTTCGAGAGGTGGAGACGCTGTATCAGTGTCAGGGAAACAA---------------------------------  633

Query  348  TGACACAAGGTTTTACTTGGTCTTTGAGAAATTGCAAGGAGGTTCCATCTTAGCCCACATCCAGAAGCAAAAGC  421
                                                     |||||||||||||||||||||||||||||||||
Sbjct  634  -----------------------------------------GTTCCATCTTAGCCCACATCCAGAAGCAAAAGC  666

Query  422  ACTTCAATGAGCGAGAAGCCAGCCGAGTGGTGCGGGACGTTGCTGCTGCCCTTGACTTCCTGCATACCAAAGGC  495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACTTCAATGAGCGAGAAGCCAGCCGAGTGGTGCGGGACGTTGCTGCTGCCCTTGACTTCCTGCATACCAAAGGC  740

Query  496  ATTGCTCATCGTGATCTGAAACCAGAAAATATATTGTGTGAATCTCCAGAAAAGGTGTCTCCAGTGAAAATCTG  569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATTGCTCATCGTGATCTGAAACCAGAAAATATATTGTGTGAATCTCCAGAAAAGGTGTCTCCAGTGAAAATCTG  814

Query  570  TGACTTTGACTTGGGCAGTGGGATGAAACTGAACAACTCCTGTACCCCCATAACCACACCAGAGCTGACCACCC  643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGACTTTGACTTGGGCAGTGGGATGAAACTGAACAACTCCTGTACCCCCATAACCACACCAGAGCTGACCACCC  888

Query  644  CATGTGGCTCTGCAGAATACATGGCCCCTGAGGTAGTGGAGGTCTTCACGGACCAGGCCACATTCTACGACAAG  717
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CATGTGGCTCTGCAGAATACATGGCCCCTGAGGTAGTGGAGGTCTTCACGGACCAGGCCACATTCTACGACAAG  962

Query  718  CGCTGTGACCTGTGGAGCCTGGGCGTGGTCCTCTACATCATGCTGAGTGGCTACCCACCCTTCGTGGGTCACTG  791
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CGCTGTGACCTGTGGAGCCTGGGCGTGGTCCTCTACATCATGCTGAGTGGCTACCCACCCTTCGTGGGTCACTG  1036

Query  792  CGGGGCCGACTGTGGCTGGGACCGGGGCGAGGTCTGCAGGGTGTGCCAGAACAAGCTGTTTGAAAGCATCCAGG  865
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CGGGGCCGACTGTGGCTGGGACCGGGGCGAGGTCTGCAGGGTGTGCCAGAACAAGCTGTTTGAAAGCATCCAGG  1110

Query  866  AAGGCAAGTATGAGTTTCCTGACAAGGACTGGGCACACATCTCCAGTGAAGCCAAAGACCTCATCTCCAAGCTC  939
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AAGGCAAGTATGAGTTTCCTGACAAGGACTGGGCACACATCTCCAGTGAAGCCAAAGACCTCATCTCCAAGCTC  1184

Query  940  CTGGTGCGAGATGCAAAGCAGAGACTTAGCGCCGCCCAAGTTCTGCAGCACCCATGGGTGCAGGGGCAAGCTCC  1013
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CTGGTGCGAGATGCAAAGCAGAGACTTAGCGCCGCCCAAGTTCTGCAGCACCCATGGGTGCAGGGGCAAGCTCC  1258

Query 1014  AGAAAAGGGACTCCCCACGCCGCAAGTCCTCCAGAGGAACAGCAGCACAATGGACCTGACGCTCTTCGCAGCTG  1087
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AGAAAAGGGACTCCCCACGCCGCAAGTCCTCCAGAGGAACAGCAGCACAATGGACCTGACGCTCTTCGCAGCTG  1332

Query 1088  AGGCCATCGCCCTTAACCGCCAGCTATCTCAGCACGAAGAGAACGAACTAGCAGAGGAGCCAGAGGCACTAGCT  1161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AGGCCATCGCCCTTAACCGCCAGCTATCTCAGCACGAAGAGAACGAACTAGCAGAGGAGCCAGAGGCACTAGCT  1406

Query 1162  GATGGCCTCTGCTCCATGAAGCTTTCCCCTCCCTGCAAGTCACGCCTGGCCCGGAGACGGGCCCTGGCCCAGGC  1235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GATGGCCTCTGCTCCATGAAGCTTTCCCCTCCCTGCAAGTCACGCCTGGCCCGGAGACGGGCCCTGGCCCAGGC  1480

Query 1236  AGGCCGTGGTGAAGACAGGAGCCCGCCCACAGCACTC-------------------------------------  1272
            |||||||||||||||||||||||||||||||||||||                                     
Sbjct 1481  AGGCCGTGGTGAAGACAGGAGCCCGCCCACAGCACTCTGAAATGCTCCAGTCACACCTTATAGGCCCTAGGCCT  1554

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1555  GGCCAGGCATTGTCCCCTGGAAACCTGTGTGGCTAAAGTCTGCTGAGCAGGCAGCAGCCTCTGCTCTGTGGCTC  1628

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1629  CATTCAGGCTTTTTCATCTACGAAGGCCCTGAGGTTCCCATCAACCCCCATTTCCCTAGGGTCCTGGAGGAAAA  1702

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1703  AGCTTTTTCCAAAGGGGTTGTCTTTGAAAAGGAAAGCAATCACTTCTCACTTTGCATAATTGCCTGCAGCAGGA  1776

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1777  ACATCTCTTCACTGGGCTCCACCTGCTCACCCGCCTGCAGATCTGGGATCCAGCCTGCTCTCACCGCTGTAGCT  1850

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1851  GTGGCGGCTGGGGCTGCAGCCTGCAGGGAGAAGCAAGAAGCATCAGTTGACAGAGGCTGCCGACACGTGCCTCT  1924

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1925  TCCCTCTCTTCTCTGTCACCCTCCTCTGGCGGTCCTTCCACCTTCCTCTGTCCTCCGGATGTCCTCTTTGCCCG  1998

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1999  TCTTCTCCCTTGGCTGAGCAAAGCCATCCCCTCAATTCAGGGAAGGGCAAGGAGCCTTCCTCATTCAGGAAATC  2072

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2073  AAATCAGTCTTCCGGTCTGCAGCACGGAAAAGCACATAATCTTTCTTTGCTGTGACTGAAATGTATCCCTCGTT  2146

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2147  TATCATCCCCTTTGTTTGTGATTGCTGCTAAAGTCAGTAGTATCGTTTTTTTAAAAAAAAAGTTTGGTGTTTTT  2220

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2221  AACCATGCTGTTCCAGCAAAGATGATACCTTAAACTCCCACTGCAAGCCCATGAACTTCCCAGAGAGTGGAACG  2294

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2295  GCTTGCTCTTCTTTCTAGAATGTCCATGCACTTGGGTTTTAATCAGCAGTTCCCTATTATTCTGATTTTAAGCT  2368

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2369  GTTCCTGTGATGAACTTAGAGACAGCATCGGTGTCTGCTGCTGTGTCCCCAGGTCTTGTGTGGGTGGCACAGAT  2442

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2443  CTGGGCAGTTAGATAGTGCTCTGTGCCTAAGGTGAAGCCACACTAGGGTGAAGCCTCACTTCCCTGTTTGAGCA  2516

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2517  ATGCAGTGCCTGCTGCCCGTGTGCATGAAGGTACAGCCATTCAGATAAGTGGAACTATTGAGTTACATAAAGAA  2590

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2591  AATAGATTTGCATTTGTCAGGCAGACGTTTATACAACACCACGGTGCTTTTATACATTGTGCTTATTTTAATAA  2664

Query 1273  ------------------------  1272
                                    
Sbjct 2665  AACTGAAATTCTATGTGTGGCCTA  2688

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