Nucleotide Global Alignment
Description
- Query:
- TRCN0000488574
- Subject:
- NR_024176.3
- Aligned Length:
- 2762
- Identities:
- 1198
- Gaps:
- 1564
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTAGCACCGCCTCTTCCGCGTTCTCGGAGGAGCGATCTGCAGGTAGGGGTGCGCGCGACCGCTCCCCGGCGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCAGCGAAGGTTTCCATGTCAGAGGCCGATGGAGAACTGAAGATTGCCACCTACGCACAAAGGCCATTGAGAC 148
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 149 ACTTCGTGTAGCTGGAAGACACCAACTTCCTGACAGGAGCTTTATTTCATTTGGGATTTCAAGTTTACAGATGG 222
Query 5 TATCTTCTCAAAAGTTGGAAAAACCTAT---------------------------------------------- 32
||||||||||||||||||||||||||||
Sbjct 223 TATCTTCTCAAAAGTTGGAAAAACCTATAGTTTCAGAAACAACTCTCCAAGTTCCATTTCCAAGGAAAGTCTTA 296
Query 33 -------------------------------------------------------AGAGATGGGCAGTAGCGAA 51
|||||||||||||||||||
Sbjct 297 ACCATTTGTCCCTTCTGGCGTACCCTCTTTCATTGAAATCCATGCAGAATATACCAGAGATGGGCAGTAGCGAA 370
Query 52 CCCCTTCCCATCGCAGATGGTGACAGGAGGAGGAAGAAGAAGCGGAGGGGCCGGGCCACTGACTCCTTGCCAGG 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCCCTTCCCATCGCAGATGGTGACAGGAGGAGGAAGAAGAAGCGGAGGGGCCGGGCCACTGACTCCTTGCCAGG 444
Query 126 AAAGTTTGAAGATATGTACAAGCTGACCTCTGAATTGCTTGGAGAGGGAGCCTATGCCAAAGTTCAAGGTGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAAGTTTGAAGATATGTACAAGCTGACCTCTGAATTGCTTGGAGAGGGAGCCTATGCCAAAGTTCAAGGTGCCG 518
Query 200 TGAGCCTACAGAATGGCAAAGAGTATGCCGTCAAAATCATCGAGAAACAAGCAGGGCACAGTCGGAGTAGGGTG 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAGCCTACAGAATGGCAAAGAGTATGCCGTCAAAATCATCGAGAAACAAGCAGGGCACAGTCGGAGTAGGGTG 592
Query 274 TTTCGAGAGGTGGAGACGCTGTATCAGTGTCAGGGAAACAAGAACATTTTGGAGCTGATTGAGTTCTTTGAAGA 347
|||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTTCGAGAGGTGGAGACGCTGTATCAGTGTCAGGGAAACAA--------------------------------- 633
Query 348 TGACACAAGGTTTTACTTGGTCTTTGAGAAATTGCAAGGAGGTTCCATCTTAGCCCACATCCAGAAGCAAAAGC 421
|||||||||||||||||||||||||||||||||
Sbjct 634 -----------------------------------------GTTCCATCTTAGCCCACATCCAGAAGCAAAAGC 666
Query 422 ACTTCAATGAGCGAGAAGCCAGCCGAGTGGTGCGGGACGTTGCTGCTGCCCTTGACTTCCTGCATACCAAAGGC 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACTTCAATGAGCGAGAAGCCAGCCGAGTGGTGCGGGACGTTGCTGCTGCCCTTGACTTCCTGCATACCAAAGGC 740
Query 496 ATTGCTCATCGTGATCTGAAACCAGAAAATATATTGTGTGAATCTCCAGAAAAGGTGTCTCCAGTGAAAATCTG 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATTGCTCATCGTGATCTGAAACCAGAAAATATATTGTGTGAATCTCCAGAAAAGGTGTCTCCAGTGAAAATCTG 814
Query 570 TGACTTTGACTTGGGCAGTGGGATGAAACTGAACAACTCCTGTACCCCCATAACCACACCAGAGCTGACCACCC 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGACTTTGACTTGGGCAGTGGGATGAAACTGAACAACTCCTGTACCCCCATAACCACACCAGAGCTGACCACCC 888
Query 644 CATGTGGCTCTGCAGAATACATGGCCCCTGAGGTAGTGGAGGTCTTCACGGACCAGGCCACATTCTACGACAAG 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CATGTGGCTCTGCAGAATACATGGCCCCTGAGGTAGTGGAGGTCTTCACGGACCAGGCCACATTCTACGACAAG 962
Query 718 CGCTGTGACCTGTGGAGCCTGGGCGTGGTCCTCTACATCATGCTGAGTGGCTACCCACCCTTCGTGGGTCACTG 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CGCTGTGACCTGTGGAGCCTGGGCGTGGTCCTCTACATCATGCTGAGTGGCTACCCACCCTTCGTGGGTCACTG 1036
Query 792 CGGGGCCGACTGTGGCTGGGACCGGGGCGAGGTCTGCAGGGTGTGCCAGAACAAGCTGTTTGAAAGCATCCAGG 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CGGGGCCGACTGTGGCTGGGACCGGGGCGAGGTCTGCAGGGTGTGCCAGAACAAGCTGTTTGAAAGCATCCAGG 1110
Query 866 AAGGCAAGTATGAGTTTCCTGACAAGGACTGGGCACACATCTCCAGTGAAGCCAAAGACCTCATCTCCAAGCTC 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAGGCAAGTATGAGTTTCCTGACAAGGACTGGGCACACATCTCCAGTGAAGCCAAAGACCTCATCTCCAAGCTC 1184
Query 940 CTGGTGCGAGATGCAAAGCAGAGACTTAGCGCCGCCCAAGTTCTGCAGCACCCATGGGTGCAGGGGCAAGCTCC 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTGGTGCGAGATGCAAAGCAGAGACTTAGCGCCGCCCAAGTTCTGCAGCACCCATGGGTGCAGGGGCAAGCTCC 1258
Query 1014 AGAAAAGGGACTCCCCACGCCGCAAGTCCTCCAGAGGAACAGCAGCACAATGGACCTGACGCTCTTCGCAGCTG 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGAAAAGGGACTCCCCACGCCGCAAGTCCTCCAGAGGAACAGCAGCACAATGGACCTGACGCTCTTCGCAGCTG 1332
Query 1088 AGGCCATCGCCCTTAACCGCCAGCTATCTCAGCACGAAGAGAACGAACTAGCAGAGGAGCCAGAGGCACTAGCT 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGGCCATCGCCCTTAACCGCCAGCTATCTCAGCACGAAGAGAACGAACTAGCAGAGGAGCCAGAGGCACTAGCT 1406
Query 1162 GATGGCCTCTGCTCCATGAAGCTTTCCCCTCCCTGCAAGTCACGCCTGGCCCGGAGACGGGCCCTGGCCCAGGC 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GATGGCCTCTGCTCCATGAAGCTTTCCCCTCCCTGCAAGTCACGCCTGGCCCGGAGACGGGCCCTGGCCCAGGC 1480
Query 1236 AGGCCGTGGTGAAGACAGGAGCCCGCCCACAGCACTC------------------------------------- 1272
|||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGGCCGTGGTGAAGACAGGAGCCCGCCCACAGCACTCTGAAATGCTCCAGTCACACCTTATAGGCCCTAGGCCT 1554
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1555 GGCCAGGCATTGTCCCCTGGAAACCTGTGTGGCTAAAGTCTGCTGAGCAGGCAGCAGCCTCTGCTCTGTGGCTC 1628
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1629 CATTCAGGCTTTTTCATCTACGAAGGCCCTGAGGTTCCCATCAACCCCCATTTCCCTAGGGTCCTGGAGGAAAA 1702
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1703 AGCTTTTTCCAAAGGGGTTGTCTTTGAAAAGGAAAGCAATCACTTCTCACTTTGCATAATTGCCTGCAGCAGGA 1776
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1777 ACATCTCTTCACTGGGCTCCACCTGCTCACCCGCCTGCAGATCTGGGATCCAGCCTGCTCTCACCGCTGTAGCT 1850
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1851 GTGGCGGCTGGGGCTGCAGCCTGCAGGGAGAAGCAAGAAGCATCAGTTGACAGAGGCTGCCGACACGTGCCTCT 1924
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1925 TCCCTCTCTTCTCTGTCACCCTCCTCTGGCGGTCCTTCCACCTTCCTCTGTCCTCCGGATGTCCTCTTTGCCCG 1998
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1999 TCTTCTCCCTTGGCTGAGCAAAGCCATCCCCTCAATTCAGGGAAGGGCAAGGAGCCTTCCTCATTCAGGAAATC 2072
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 2073 AAATCAGTCTTCCGGTCTGCAGCACGGAAAAGCACATAATCTTTCTTTGCTGTGACTGAAATGTATCCCTCGTT 2146
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 2147 TATCATCCCCTTTGTTTGTGATTGCTGCTAAAGTCAGTAGTATCGTTTTTTTAAAAAAAAAGTTTGGTGTTTTT 2220
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 2221 AACCATGCTGTTCCAGCAAAGATGATACCTTAAACTCCCACTGCAAGCCCATGAACTTCCCAGAGAGTGGAACG 2294
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 2295 GCTTGCTCTTCTTTCTAGAATGTCCATGCACTTGGGTTTTAATCAGCAGTTCCCTATTATTCTGATTTTAAGCT 2368
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 2369 GTTCCTGTGATGAACTTAGAGACAGCATCGGTGTCTGCTGCTGTGTCCCCAGGTCTTGTGTGGGTGGCACAGAT 2442
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 2443 CTGGGCAGTTAGATAGTGCTCTGTGCCTAAGGTGAAGCCACACTAGGGTGAAGCCTCACTTCCCTGTTTGAGCA 2516
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 2517 ATGCAGTGCCTGCTGCCCGTGTGCATGAAGGTACAGCCATTCAGATAAGTGGAACTATTGAGTTACATAAAGAA 2590
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 2591 AATAGATTTGCATTTGTCAGGCAGACGTTTATACAACACCACGGTGCTTTTATACATTGTGCTTATTTTAATAA 2664
Query 1273 ------------------------ 1272
Sbjct 2665 AACTGAAATTCTATGTGTGGCCTA 2688
