Nucleotide Global Alignment

Description

Query:
TRCN0000488589
Subject:
NM_001289760.1
Aligned Length:
1482
Identities:
1183
Gaps:
173

Alignment

Query    1  ATGTTTGACTGTAT----------------GGAT-----GTTCTGTCAGTGAGTCCTGGGCAAATCCTGGA-TT  52
                        ||                |.||     ||.|.|.|||||   |.|||.||.||    || |.
Sbjct    1  ------------ATGAGCACCAGCAGCCACGCATGCCCAGTCCCGGCAGTG---CGTGGACACAT----GACTC  55

Query   53  TCTACACTGC-----------------------------------GAGTCCGTCTTCCTGCAT-----------  80
            .||||.|.||                                   |||..| |||.|||||.|           
Sbjct   56  ACTACCCAGCTGCACCCTACCCATTACTGTTCCCCCCTGTCATCAGAGGAC-TCTCCCTGCCTCCACTCCATGG  128

Query   81  GCTCCA-------------------GGAGAAAGCTC----TCA----------------AAGCATGCTTCAGTG  115
            ||||||                   |||...|||.|    |||                |.|||||  ||||.|
Sbjct  129  GCTCCATGGCCACCCACCTCCCAGTGGATGCAGCACCCCATCACCAGCCAGTGTGGGGCAGGCATG--TCAGAG  200

Query  116  GATTGACCCAAACC-----GAA------TGGCAGCATC--------GGCACAC----------TGCTCAATCAA  160
            ||      |||  |     |||      |.|||||.||        || ||||          |||   |.|.|
Sbjct  201  GA------CAA--CTGGTGGAAGTCAGTTTGCAGCTTCTACCAAGTGG-ACACCAAGCTTGAATGC---AGCCA  262

Query  161  TTGAAACACAGAGCACCAGCTCTGAGGAACTCGTCCCAAGCCCCCCATCTCCACTTCCTCCCCCTCGAGTGTAC  234
            |.||.||||||||.||||||||||||||.||||||||.|||||.|||||||||||||||||.|||||.||||||
Sbjct  263  TCGAGACACAGAGTACCAGCTCTGAGGAGCTCGTCCCGAGCCCACCATCTCCACTTCCTCCTCCTCGGGTGTAC  336

Query  235  AAACCCTGCTTCGTCTGCCAGGACAAATCATCAGGGTACCACTATGGGGTCAGCGCCTGTGAGGGATGTAAGGG  308
            ||.|||||||||||.|||||||||||.|||||.||.|||||||||||.|||||.|||||.|||||.||.|||||
Sbjct  337  AAGCCCTGCTTCGTTTGCCAGGACAAGTCATCGGGCTACCACTATGGCGTCAGTGCCTGCGAGGGGTGCAAGGG  410

Query  309  CTTTTTCCGCAGAAGTATTCAGAAGAATATGATTTACACTTGTCACCGAGATAAGAACTGTGTTATTAATAAAG  382
            |||||||||||||||||||||||||||.|||||.||||||||.||.||||||||||||||.||.|||||.||.|
Sbjct  411  CTTTTTCCGCAGAAGTATTCAGAAGAACATGATCTACACTTGCCATCGAGATAAGAACTGCGTCATTAACAAGG  484

Query  383  TCACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTTTGAAGTGGGAATGTCCAAAGAATCTGTCAGG  456
            ||||.|||||.||||||||.|||||.||.||.||||||||||||||||||||.|||||||||||.|||||.|||
Sbjct  485  TCACTAGGAACCGATGCCAGTACTGCCGCCTGCAGAAGTGCTTTGAAGTGGGCATGTCCAAAGAGTCTGTTAGG  558

Query  457  AATGACAGGAACAAGAAAAAGAAGGAGACTTCGAAGCAAGAATGCACAGAGAGCTATGAAATGACAGCTGAGTT  530
            |||||||||||||||||||||||||||.||||.|||||.||||||||||||||||||||.||||||||.|||.|
Sbjct  559  AATGACAGGAACAAGAAAAAGAAGGAGCCTTCAAAGCAGGAATGCACAGAGAGCTATGAGATGACAGCGGAGCT  632

Query  531  GGACGATCTCACAGAGAAGATCCGAAAAGCTCACCAGGAAA-CTTTCCCTTCACTCTGCCAGCTGGGTAAATAC  603
            .|||||.|||||.|||||||||||.|||||.|||||||||| ||||||| ||||||||||||||||||||||||
Sbjct  633  AGACGACCTCACTGAGAAGATCCGGAAAGCCCACCAGGAAACCTTTCCC-TCACTCTGCCAGCTGGGTAAATAC  705

Query  604  ACCACGAATTCCAGTGCTGACCATCGAGTCCGACTGGACCTGGGCCTCTGGGACAAATTCAGTGAACTGGCCAC  677
            ||||||||||||||.||||||||.||.||||||.|||||.|||||||||||||||||||||||||.||||||||
Sbjct  706  ACCACGAATTCCAGCGCTGACCACCGGGTCCGATTGGACTTGGGCCTCTGGGACAAATTCAGTGAGCTGGCCAC  779

Query  678  CAAGTGCATTATTAAGATCGTGGAGTTTGCTAAACGTCTGCCTGGTTTCACTGGCTTGACCATCGCAGACCAAA  751
            |||||||||||||||||||||||||||.||.||.||||||||.||.|||||.||..||||||||||||||||.|
Sbjct  780  CAAGTGCATTATTAAGATCGTGGAGTTCGCCAAGCGTCTGCCGGGCTTCACAGGTCTGACCATCGCAGACCAGA  853

Query  752  TTACCCTGCTGAAGGCCGCCTGCCTGGACATCCTGATTCTTAGAATTTGCACCAGGTATACCCCAGAACAAGAC  825
            |.||||||||.||.|||||||||.||||.|||.|||||||.||||||||.|||||||||||||||||.||||||
Sbjct  854  TCACCCTGCTCAAAGCCGCCTGCTTGGATATCTTGATTCTCAGAATTTGTACCAGGTATACCCCAGAGCAAGAC  927

Query  826  ACCATGACTTTCTCAGACGGCCTTACCCTAAATCGAACTCAGATGCACAATGCTGGATTTGGTCCTCTGACTGA  899
            ||||||||||||||.||.||||||||.|||||||||||||||||||||||||||||.||.||||||||||||||
Sbjct  928  ACCATGACTTTCTCTGATGGCCTTACACTAAATCGAACTCAGATGCACAATGCTGGCTTCGGTCCTCTGACTGA  1001

Query  900  CCTTGTGTTCACCTTTGCCAACCAGCTCCTGCCTTTGGAAATGGATGACACAGAAACAGGCCTTCTCAGTGCCA  973
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1002  CCTTGTGTTCACCTTTGCCAACCAGCTCCTGCCTTTGGAAATGGATGACACAGAAACAGGCCTTCTCAGTGCCA  1075

Query  974  TCTGCTTAATCTGTGGAGACCGCCAGGACCTTGAGGAACCGACAAAAGTAGATAAGCTACAAGAACCATTGCTG  1047
            ||||.|||||||||||||||||||||||||||||||||||.|||||||||||.|||||.|||||||||.|||||
Sbjct 1076  TCTGTTTAATCTGTGGAGACCGCCAGGACCTTGAGGAACCAACAAAAGTAGACAAGCTCCAAGAACCACTGCTG  1149

Query 1048  GAAGCACTAAAAATTTATATCAGAAAAAGACGACCCAGCAAGCCTCACATGTTTCCAAAGATCTTAATGAAAAT  1121
            |||||||||||.|||||.||.||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1150  GAAGCACTAAAGATTTACATTAGAAAACGACGACCCAGCAAGCCTCACATGTTTCCAAAGATCTTAATGAAAAT  1223

Query 1122  CACAGATCTCCGTAGCATCAGTGCTAAAGGTGCAGAGCGTGTAATTACCTTGAAAATGGAAATTCCTGGATCAA  1195
            ||||||||||||.||||||||.||.||||||||.||.|||||||||||||||||||||||||||||||||||||
Sbjct 1224  CACAGATCTCCGCAGCATCAGCGCGAAAGGTGCCGAACGTGTAATTACCTTGAAAATGGAAATTCCTGGATCAA  1297

Query 1196  TGCCACCTCTCATTCAAGAAATGCTGGAGAATTCTGAAGGACATGAACCCTTGACCCCAAGTTCAAGTGGGAAC  1269
            ||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1298  TGCCACCTCTCATTCAGGAAATGCTGGAGAATTCTGAAGGACATGAACCCTTGACCCCAAGTTCAAGTGGGAAT  1371

Query 1270  ACAGCAGAGCACAGTCCTAGCATCTCACCCAGCTCAGTGGAAAACAGTGGGGTCAGTCAGTCACCACTCGTGCA  1343
            |.|||||||||||||||.|||.|.||.||||||||||||||.||||||||.|||||||||||||||||..||||
Sbjct 1372  ATAGCAGAGCACAGTCCCAGCGTGTCCCCCAGCTCAGTGGAGAACAGTGGAGTCAGTCAGTCACCACTGCTGCA  1445

Query 1344  AG  1345
            . 
Sbjct 1446  G-  1446

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