Nucleotide Global Alignment

Description

Query:
TRCN0000488589
Subject:
NM_001289761.1
Aligned Length:
1428
Identities:
1164
Gaps:
146

Alignment

Query    1  ATGTTTGACTGTAT----------------GGAT-----GTTCTGTCAGTGAGTCCTGGGCAAATCCTGGA-TT  52
                        ||                |.||     ||.|.|.|||||   |.|||.||.||    || |.
Sbjct    1  ------------ATGAGCACCAGCAGCCACGCATGCCCAGTCCCGGCAGTG---CGTGGACACAT----GACTC  55

Query   53  TCTACACTGC-----------------------------------GAGTCCGTCTTCCTGCATGCTCCA-----  86
            .||||.|.||                                   |||..| |||.|||||   |||||     
Sbjct   56  ACTACCCAGCTGCACCCTACCCATTACTGTTCCCCCCTGTCATCAGAGGAC-TCTCCCTGC---CTCCACTCCA  125

Query   87  -GGAGAAAGCTCTCAAAGCATG---------CT-TCAGTGGATTGACCCAAACCGAATGGCAGCATCGGCACAC  149
             ||     ||||      ||||         || .||||||||                ||||||         
Sbjct  126  TGG-----GCTC------CATGGCCACCCACCTCCCAGTGGAT----------------GCAGCA---------  163

Query  150  TGCTCAATCA---------ATTGAAACACAGAGCACCAGCTCTGAGGAACTCGTCCCAAGCCCCCCATCTCCAC  214
              |.|.||||         ||.||.||||||||.||||||||||||||.||||||||.|||||.||||||||||
Sbjct  164  --CCCCATCACCAGCCACCATCGAGACACAGAGTACCAGCTCTGAGGAGCTCGTCCCGAGCCCACCATCTCCAC  235

Query  215  TTCCTCCCCCTCGAGTGTACAAACCCTGCTTCGTCTGCCAGGACAAATCATCAGGGTACCACTATGGGGTCAGC  288
            |||||||.|||||.||||||||.|||||||||||.|||||||||||.|||||.||.|||||||||||.|||||.
Sbjct  236  TTCCTCCTCCTCGGGTGTACAAGCCCTGCTTCGTTTGCCAGGACAAGTCATCGGGCTACCACTATGGCGTCAGT  309

Query  289  GCCTGTGAGGGATGTAAGGGCTTTTTCCGCAGAAGTATTCAGAAGAATATGATTTACACTTGTCACCGAGATAA  362
            |||||.|||||.||.||||||||||||||||||||||||||||||||.|||||.||||||||.||.||||||||
Sbjct  310  GCCTGCGAGGGGTGCAAGGGCTTTTTCCGCAGAAGTATTCAGAAGAACATGATCTACACTTGCCATCGAGATAA  383

Query  363  GAACTGTGTTATTAATAAAGTCACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTTTGAAGTGGGAA  436
            ||||||.||.|||||.||.|||||.|||||.||||||||.|||||.||.||.||||||||||||||||||||.|
Sbjct  384  GAACTGCGTCATTAACAAGGTCACTAGGAACCGATGCCAGTACTGCCGCCTGCAGAAGTGCTTTGAAGTGGGCA  457

Query  437  TGTCCAAAGAATCTGTCAGGAATGACAGGAACAAGAAAAAGAAGGAGACTTCGAAGCAAGAATGCACAGAGAGC  510
            ||||||||||.|||||.||||||||||||||||||||||||||||||.||||.|||||.|||||||||||||||
Sbjct  458  TGTCCAAAGAGTCTGTTAGGAATGACAGGAACAAGAAAAAGAAGGAGCCTTCAAAGCAGGAATGCACAGAGAGC  531

Query  511  TATGAAATGACAGCTGAGTTGGACGATCTCACAGAGAAGATCCGAAAAGCTCACCAGGAAA-CTTTCCCTTCAC  583
            |||||.||||||||.|||.|.|||||.|||||.|||||||||||.|||||.|||||||||| ||||||| ||||
Sbjct  532  TATGAGATGACAGCGGAGCTAGACGACCTCACTGAGAAGATCCGGAAAGCCCACCAGGAAACCTTTCCC-TCAC  604

Query  584  TCTGCCAGCTGGGTAAATACACCACGAATTCCAGTGCTGACCATCGAGTCCGACTGGACCTGGGCCTCTGGGAC  657
            ||||||||||||||||||||||||||||||||||.||||||||.||.||||||.|||||.||||||||||||||
Sbjct  605  TCTGCCAGCTGGGTAAATACACCACGAATTCCAGCGCTGACCACCGGGTCCGATTGGACTTGGGCCTCTGGGAC  678

Query  658  AAATTCAGTGAACTGGCCACCAAGTGCATTATTAAGATCGTGGAGTTTGCTAAACGTCTGCCTGGTTTCACTGG  731
            |||||||||||.|||||||||||||||||||||||||||||||||||.||.||.||||||||.||.|||||.||
Sbjct  679  AAATTCAGTGAGCTGGCCACCAAGTGCATTATTAAGATCGTGGAGTTCGCCAAGCGTCTGCCGGGCTTCACAGG  752

Query  732  CTTGACCATCGCAGACCAAATTACCCTGCTGAAGGCCGCCTGCCTGGACATCCTGATTCTTAGAATTTGCACCA  805
            ..||||||||||||||||.||.||||||||.||.|||||||||.||||.|||.|||||||.||||||||.||||
Sbjct  753  TCTGACCATCGCAGACCAGATCACCCTGCTCAAAGCCGCCTGCTTGGATATCTTGATTCTCAGAATTTGTACCA  826

Query  806  GGTATACCCCAGAACAAGACACCATGACTTTCTCAGACGGCCTTACCCTAAATCGAACTCAGATGCACAATGCT  879
            |||||||||||||.||||||||||||||||||||.||.||||||||.|||||||||||||||||||||||||||
Sbjct  827  GGTATACCCCAGAGCAAGACACCATGACTTTCTCTGATGGCCTTACACTAAATCGAACTCAGATGCACAATGCT  900

Query  880  GGATTTGGTCCTCTGACTGACCTTGTGTTCACCTTTGCCAACCAGCTCCTGCCTTTGGAAATGGATGACACAGA  953
            ||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  901  GGCTTCGGTCCTCTGACTGACCTTGTGTTCACCTTTGCCAACCAGCTCCTGCCTTTGGAAATGGATGACACAGA  974

Query  954  AACAGGCCTTCTCAGTGCCATCTGCTTAATCTGTGGAGACCGCCAGGACCTTGAGGAACCGACAAAAGTAGATA  1027
            ||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||.|
Sbjct  975  AACAGGCCTTCTCAGTGCCATCTGTTTAATCTGTGGAGACCGCCAGGACCTTGAGGAACCAACAAAAGTAGACA  1048

Query 1028  AGCTACAAGAACCATTGCTGGAAGCACTAAAAATTTATATCAGAAAAAGACGACCCAGCAAGCCTCACATGTTT  1101
            ||||.|||||||||.||||||||||||||||.|||||.||.||||||.||||||||||||||||||||||||||
Sbjct 1049  AGCTCCAAGAACCACTGCTGGAAGCACTAAAGATTTACATTAGAAAACGACGACCCAGCAAGCCTCACATGTTT  1122

Query 1102  CCAAAGATCTTAATGAAAATCACAGATCTCCGTAGCATCAGTGCTAAAGGTGCAGAGCGTGTAATTACCTTGAA  1175
            ||||||||||||||||||||||||||||||||.||||||||.||.||||||||.||.|||||||||||||||||
Sbjct 1123  CCAAAGATCTTAATGAAAATCACAGATCTCCGCAGCATCAGCGCGAAAGGTGCCGAACGTGTAATTACCTTGAA  1196

Query 1176  AATGGAAATTCCTGGATCAATGCCACCTCTCATTCAAGAAATGCTGGAGAATTCTGAAGGACATGAACCCTTGA  1249
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1197  AATGGAAATTCCTGGATCAATGCCACCTCTCATTCAGGAAATGCTGGAGAATTCTGAAGGACATGAACCCTTGA  1270

Query 1250  CCCCAAGTTCAAGTGGGAACACAGCAGAGCACAGTCCTAGCATCTCACCCAGCTCAGTGGAAAACAGTGGGGTC  1323
            |||||||||||||||||||.|.|||||||||||||||.|||.|.||.||||||||||||||.||||||||.|||
Sbjct 1271  CCCCAAGTTCAAGTGGGAATATAGCAGAGCACAGTCCCAGCGTGTCCCCCAGCTCAGTGGAGAACAGTGGAGTC  1344

Query 1324  AGTCAGTCACCACTCGTGCAAG  1345
            ||||||||||||||..||||. 
Sbjct 1345  AGTCAGTCACCACTGCTGCAG-  1365

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