Nucleotide Global Alignment

Description

Query:
TRCN0000488648
Subject:
XM_024448080.1
Aligned Length:
1405
Identities:
899
Gaps:
260

Alignment

Query    1  ATGAGCCTCCATTTCTTATACTACTGCAGTGAACCAACATTGGATGTGAAAATTGCCTTTTGTCAGGGATTCGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TAAACAAGTGGATGTGTCATATATTGCCAAACATTACAACATGAGCAAAAGCAAAGTTGACAACCAGTTCTACA  148
                                                    |||||||.||||||...|||||||.|.||.||.|
Sbjct    1  ----------------------------------------ATGAGCAGAAGCAAGCGTGACAACAATTTTTATA  34

Query  149  GTGTGGAAGTGGGAGACTCAACCTTCACAGTTCTCAAGCGCTACCAGAATCTAAAGCCTATTGGCTCTGGGGCT  222
            ||||.||..|.|||||.||.||.||||||||.||.||.||.||.||||||.||||.|||||.|||||.||.|||
Sbjct   35  GTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACGATATCAGAATTTAAAACCTATAGGCTCAGGAGCT  108

Query  223  CAGGGCATAGTTTGTGCCGCGTATGATGCTGTCCTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCTT  296
            ||.||.|||||.||.||.||.||||||||..|.|||||.||||||||.||.||.||||||||.|||.||||.||
Sbjct  109  CAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAAGAAATGTTGCAATCAAGAAGCTAAGCCGACCATT  182

Query  297  TCAGAACCAAACACATGCCAAGAGAGCGTACCGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATTA  370
            ||||||.||.||.|||||||||.|.||.|||.|.|||||.||.||.|||||.|||||.||.||.|||||.||.|
Sbjct  183  TCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTAGTTCTTATGAAATGTGTTAATCACAAAAATATAA  256

Query  371  TTAGTTTATTAAATGTCTTCACACCCCAGAAAACGCTGGAGGAGTTCCAAGATGTTTACTTAGTAATGGAACTG  444
            ||.|..|.||.|||||.||||||||.||||||.|.||.||.||.||.||||||||||||.||||.|||||.||.
Sbjct  257  TTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGAAGAATTTCAAGATGTTTACATAGTCATGGAGCTC  330

Query  445  ATGGATGCCAA-CTTATGTCAAGTGATTCAGATGGAATTAGACCATGAGCGAATGTCTTACCTGCTGTACCAAA  517
            ||||||||.|| ||| ||.|||||||||||||||||..||||.|||||..|||||||.|||||.||.||.||.|
Sbjct  331  ATGGATGCAAATCTT-TGCCAAGTGATTCAGATGGAGCTAGATCATGAAAGAATGTCCTACCTTCTCTATCAGA  403

Query  518  TGTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTATTCACAGGGATTTAAAACCAAGTAACATTGTAGTC  591
            ||.|||||||.||.||||||||.||||||||||||||||||||..||||.|||||.||.|||||.||.|||||.
Sbjct  404  TGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTATTCATCGGGACTTAAAGCCCAGTAATATAGTAGTA  477

Query  592  AAGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGGCCAGGACAGCAGGCACAAGCTTCATGATGACTCC  665
            ||.|||||||||||.|||||.||.||.|||||.||.|||||||||||.|||||.||.||.||.||||||||.||
Sbjct  478  AAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGGCCAGGACTGCAGGAACGAGTTTTATGATGACGCC  551

Query  666  ATATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATCCTGGGGATGGGCTACAAGGAGAACGTGGATATAT  739
            .|||||.|||||.||.||.||||||||.||.|||||||||||.||.||||||||||||||.|||||.||.||.|
Sbjct  552  TTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATCCTTGGCATGGGCTACAAGGAAAACGTTGACATTT  625

Query  740  GGTCTGTGGGATGCATTATGGGAGAAATGGTTCGCCACAAA------ATCCTCTTTCCAGGAAGGGACTATATT  807
            ||||.||.||.|||||.||||||||||||.|      ||||      .|..|.||.|||||.|..||..|||||
Sbjct  626  GGTCAGTTGGGTGCATCATGGGAGAAATGAT------CAAAGGTGGTGTTTTGTTCCCAGGTACAGATCATATT  693

Query  808  GACCAGTGGAATAAGGTAATTGAACAACTAGGAACACCATGTCCAGAATTCATGAAGAAATTGCAACCCACAGT  881
            ||.|||||||||||.||.||||||||.||.||||||||||||||.|||||||||||||||.|||||||.|||||
Sbjct  694  GATCAGTGGAATAAAGTTATTGAACAGCTTGGAACACCATGTCCTGAATTCATGAAGAAACTGCAACCAACAGT  767

Query  882  AAGAAACTATGTGGAGAATCGGCCCAAGTATGCGGGACTCACCTTCCCCAAACTCTTCCCAGATTCCCTCTTCC  955
            |||.|..||.||.||.||..|.||.||.|||||.|||...|.|||....|||||||||||.|||..|||.||||
Sbjct  768  AAGGACTTACGTTGAAAACAGACCTAAATATGCTGGATATAGCTTTGAGAAACTCTTCCCTGATGTCCTTTTCC  841

Query  956  CAGCGGACTCCGAGCACAATAAACTCAAAGCCAGCCAAGCCAGGGACTTGTTGTCAAAGATGCTAGTGATTGAC  1029
            ||||.|||||.||.|||||.|||||.||||||||.||.||.|||||.|||||.||.||.|||||.||.||.||.
Sbjct  842  CAGCTGACTCAGAACACAACAAACTTAAAGCCAGTCAGGCAAGGGATTTGTTATCCAAAATGCTGGTAATAGAT  915

Query 1030  CCAGCAAAAAGAATATCAGTGGACGACGCCTTACAGCATCCCTACATCAACGTCTGGTATGACCCAGCCGAAGT  1103
            .||.|.|||||.||.||.||.||.||.||..|.||.||.||.||||||||.|||||||||||.||..|.||||.
Sbjct  916  GCATCTAAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACATCAATGTCTGGTATGATCCTTCTGAAGC  989

Query 1104  GGAGGCGCCTCCACCTCAGATATATGACAAGCAGTTGGATGAAAGAGAACACACAATTGAAGAATGGAAAGAAC  1177
            .||.||.||.|||||..||||...||||||||||||.||||||||.|||||||||||.|||||.|||||||||.
Sbjct  990  AGAAGCTCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGGGAACACACAATAGAAGAGTGGAAAGAAT  1063

Query 1178  TTATCTACAAGGAAGTAATGAATTCAGAAGAAAAGACTAAAAATGGTGTAGTAAAAGGACAGCCTTCTCCTTCA  1251
            |.||.||.||||||||.|||.|.|..||.||.|..||.||.|||||.||..||...||.|||||.|||||||.|
Sbjct 1064  TGATATATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGGAGTTATACGGGGGCAGCCCTCTCCTTTA  1137

Query 1252  GCACAGGTGCAGCAGTGAACAGCAGTGAGAGTCTCCCTCCATCCTCGTCTGTCAATGACATCTCCTCCATGTCC  1325
            |||||||||||||||                                                           
Sbjct 1138  GCACAGGTGCAGCAG-----------------------------------------------------------  1152

Query 1326  ACCGACCAGACCCTGGCATCTGACACTGACAGCAGCCTGGAAGCCTCGGCAGGACCCCTGGGTTGTTGCAGGG  1398
                                                                                     
Sbjct 1153  -------------------------------------------------------------------------  1152

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