Nucleotide Global Alignment

Description

Query:
TRCN0000488651
Subject:
NR_104445.1
Aligned Length:
3578
Identities:
1164
Gaps:
2413

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGATGAGCAGCGCTCCGGCCAGGGAGGGCGCGTGCTGGCCAGCCCGGAACGGGTGAGATCGCTCCAGCCCGCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTGTGCCCACTCCCCTGTGCGCCCTGCCGGCAGAGCGGCACCCCCGCTGTCCCTGGCGCCCAGTGGGGGCGGCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGGGCAGGGCAGCGGGGACCACCGGGGCTGGGGGCTGTTGAGCCCGTGGAGTCCGGCTCGGTTGGGGAGAAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACGATGCGCGGCGAGCCCAGGTGATCCGGGGCTGGGGTCCTGCGCCCGCAGCCCCTGGCCCGCGCCTCACGCTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCCGGCTCCCCAGCGCGGGGGCTGGAGCCCGCACCCGAGGGGGCGGCAGGGAGGGCGCAGGCAGCGGCTGGGAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CGCAGCGGCAGCGGCGGCAGCAGAAGCTCGGCTCAGCGGCTGGGGGTGGCCGCTCGAATCTGCCAGGGCACCTC  444

Query    1  ---------------------------------------------------------------------ATGGA  5
                                                                                 |||||
Sbjct  445  GCTCCCTCGCCTCTGGCAGCGGGACCCTGTGGGCATTGAAATCCAACTCACTCATGCTTATTTCCTGTAATGGA  518

Query    6  CAAACTTGATGCTAATGTGAGTTCTGAGGAGGGTTTCGGGTCAGTGGAGAAGGTGGTGCTGCTCACGTTTCTCT  79
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAAACTTGATGCTAATGTGAGTTCTGAGGAGGGTTTCGGGTCAGTGGAGAAGGTGGTGCTGCTCACGTTTCTCT  592

Query   80  CGACGGTTATCCTGATGGCCATCTTGGGGAACCTGCTGGTGATGGTGGCTGTGTGCTGGGACAGGCAGCTCAGG  153
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CGACGGTTATCCTGATGGCCATCTTGGGGAACCTGCTGGTGATGGTGGCTGTGTGCTGGGACAGGCAGCTCAGG  666

Query  154  AAAATAAAAACAAATTATTTCATTGTATCTCTTGCTTTTGCGGATCTGCTGGTTTCGGTGCTGGTGATGCCCTT  227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAAATAAAAACAAATTATTTCATTGTATCTCTTGCTTTTGCGGATCTGCTGGTTTCGGTGCTGGTGATGCCCTT  740

Query  228  TGGTGCCATTGAGCTGGTTCAAGACATCTGGATTTATGGGGAGGTGTTTTGTCTTGTTCGGACATCTCTGGACG  301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGGTGCCATTGAGCTGGTTCAAGACATCTGGATTTATGGGGAGGTGTTTTGTCTTGTTCGGACATCTCTGGACG  814

Query  302  TCCTGCTCACAACGGCATCGATTTTTCACCTGTGCTGCATTTCTCTGGATAGGTATTACGCCATCTGCTGCCAG  375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TCCTGCTCACAACGGCATCGATTTTTCACCTGTGCTGCATTTCTCTGGATAGGTATTACGCCATCTGCTGCCAG  888

Query  376  CCTTTGGTCTATAGGAACAAGATGACCCCTCTGCGCATCGCATTAATGCTGGGAGGCTGCTGGGTCATCCCCAC  449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CCTTTGGTCTATAGGAACAAGATGACCCCTCTGCGCATCGCATTAATGCTGGGAGGCTGCTGGGTCATCCCCAC  962

Query  450  GTTTATTTCTTTTCTCCCTATAATGCAAGGCTGGAATAACATTGGCATAATTGATTTGATAGAAAAGAGGAAGT  523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GTTTATTTCTTTTCTCCCTATAATGCAAGGCTGGAATAACATTGGCATAATTGATTTGATAGAAAAGAGGAAGT  1036

Query  524  TCAACCAGAACTCTAACTCTACGTACTGTGTCTTCATGGTCAACAAGCCCTACGCCATCACCTGCTCTGTGGTG  597
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TCAACCAGAACTCTAACTCTACGTACTGTGTCTTCATGGTCAACAAGCCCTACGCCATCACCTGCTCTGTGGTG  1110

Query  598  GCCTTCTACATCCCATTTCTCCTCATGGTGCTGGCCTATTACCGCATCTATGTCACAGCTAAGGAGCATGCCCA  671
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GCCTTCTACATCCCATTTCTCCTCATGGTGCTGGCCTATTACCGCATCTATGTCACAGCTAAGGAGCATGCCCA  1184

Query  672  TCAGATCCAGATGTTACAACGGGCAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACTC  745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCAGATCCAGATGTTACAACGGGCAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACTC  1258

Query  746  ATCGCATGAGGACAGAGACCAAAGCAGCCAAGACCCTGTGCATCATCATGGGTTGCTTCTGCCTCTGCTGGGCA  819
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ATCGCATGAGGACAGAGACCAAAGCAGCCAAGACCCTGTGCATCATCATGGGTTGCTTCTGCCTCTGCTGGGCA  1332

Query  820  CCATTCTTTGTCACCAATATTGTGGATCCTTTCATAGACTACACTGTCCCTGGGCAGGTGTGGACTGCTTTCCT  893
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CCATTCTTTGTCACCAATATTGTGGATCCTTTCATAGACTACACTGTCCCTGGGCAGGTGTGGACTGCTTTCCT  1406

Query  894  CTGGCTCGGCTATATCAATTCCGGGTTGAACCCTTTTCTCTACGCCTTCTTGAATAAGTCTTTTAGACGTGCCT  967
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CTGGCTCGGCTATATCAATTCCGGGTTGAACCCTTTTCTCTACGCCTTCTTGAATAAGTCTTTTAGACGTGCCT  1480

Query  968  TCCTCATCATCCTCTGCTGTGATGATGAGCGCTACCGAAGACCTTCCATTCTGGGCCAGACTGTCCCTTGTTCA  1041
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TCCTCATCATCCTCTGCTGTGATGATGAGCGCTACCGAAGACCTTCCATTCTGGGCCAGACTGTCCCTTGTTCA  1554

Query 1042  ACCACAACCATTAATGGATCCACACATGTACTA-----------------------------------------  1074
            |||||||||||||||||||||||||||||||||                                         
Sbjct 1555  ACCACAACCATTAATGGATCCACACATGTACTAAGGGCTGTTAGAGGAAACAGGAATTCGACTTCTTCTGCATA  1628

Query 1075  --------------------------------------------------------------------------  1074
                                                                                      
Sbjct 1629  ATGTGAGGGAGAGAGGTAAGAAACAAAGGATTGAGGTTATAAGAACATGTATTTCAGCACAAAATGGAATGGAT  1702

Query 1075  --------------------------------------------------------------------------  1074
                                                                                      
Sbjct 1703  TGCCTTACTAGGGAGTTCCTAGTAAAGTTGAAGGAGACAATTGGATGACCATCAGTCAATTAAAAGTGTTGATT  1776

Query 1075  ----------------------------------------------------------AGGGATGCAGTGGAGT  1090
                                                                      ||||||||||||||||
Sbjct 1777  GACCGAATATCAGTAACTGGAAGAACTGAATGTTCATTAGTCAACATTTCTGGGGAAGAGGGATGCAGTGGAGT  1850

Query 1091  GTGGTGGCCAGTGGGAGAGTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGACACT  1164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GTGGTGGCCAGTGGGAGAGTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGACACT  1924

Query 1165  G-------------------------------------------------------------------------  1165
            .                                                                         
Sbjct 1925  TAGGCCCCTGGGACAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG  1998

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 1999  CGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCT  2072

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2073  TTTCCTCTGAGATTCCAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTTTTATT  2146

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2147  TCCCAACACTCCCTCTTCCCAGATTCTCTGCTTTTGCCGCGTGGTCTCTGGTGTCTCTGACATGTTCCCGTCAC  2220

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2221  TCACTGTGTCTGATCTGTCTCACTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTC  2294

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2295  TCCAAATACGCCTTCTTTGCTGTGTGGGCTTCCAGATATCAACAAAATACTCCCTCTCTGTTCCTGTCTTAGCC  2368

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2369  AGAGGCGTCGCTCCTGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCCTGCCTC  2442

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2443  TTCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTTTTCTCCCTGTGTCTGGGTCCAAACGTGCATCCTCTTG  2516

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2517  GTTGGCCCCCTTGTCAGTCCCAGACGTCCACTTGCTCTTCCTTATGTCCAATGTCTGTCCTCCTCTTCAGGACA  2590

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2591  TGCTCCATTTATTTTCCATGGAAGACACAGGGTCAGAGATCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTG  2664

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2665  GAGGGAAGCTGAAGACAGATAGCTTCCTCCTGGTGTCCTGGCCGCTGGCGTGTCTGCCCTGAGATGCTCGCTCT  2738

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2739  CCTGCTGGGCTAGAACGGGACGTCTTCTAAAAAGCCTTGGGCAGGGCTAGCAACATCGTAGGTGTTTATTAGGC  2812

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2813  TTCAGGATCTTTCCCATGAACTTGTGATATCATTTTGAAACCCTTCAATCTGGCTTTGTTGCTGCCAAAGGAGA  2886

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2887  TAACTGTTGGAAGTTCACACTGGGGAAACTCATTTTCCCCTGCAGCTCCCCCAAGGTGCAGGAGGGCAGGATCC  2960

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 2961  AGCAGCACTGGGGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGGCTGTGCTGC  3034

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 3035  AAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGGACCCCACTTTCCACATCTGTGCACTCAAGCTT  3108

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 3109  GGACTAGAGGACCTTTAAGTTTTCTTTCTGTTTCTAAGACAACAGTATGCTGCTATAGCCGTCTGCTACCTCGA  3182

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 3183  GAAGCCATGGCCTGCCTGCCTTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT  3256

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 3257  GACCTTTCCAGCTTTGTCCTTCAGATTAATCTGGATGTCTTTTATTCAAAGCTGAGTCAGTGGCTCTTGCGAAT  3330

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 3331  GCCCCATAGCAGAAGTCCCGGGAAGGTAAATGCCAAACCCAGAGCCATGTGAGATTCTGACTTTGATCTTGGCT  3404

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 3405  GTGGTTTAATAGCATCTCAGGATTATTTATCATATTCTCTTTTTTTCTTATTGCTTATAAGGTGTCAGTTATTG  3478

Query 1166  --------------------------------------------------------------------------  1165
                                                                                      
Sbjct 3479  TTTCCATTGTTGTTTACTTTAGTTCTGGAACTGAAACCGACAGGAAGAAACTTTGGAATAAGGAAGAGAAGATT  3552

Query 1166  --------------------------  1165
                                      
Sbjct 3553  GACCAAACCATCCAAATGCCAAAAAG  3578

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