Nucleotide Global Alignment

Description

Query:
TRCN0000488688
Subject:
XM_006496719.3
Aligned Length:
1652
Identities:
1283
Gaps:
132

Alignment

Query    1  ATGGTGGGTGAAGAGAAGATGTCTCTAAGAAACCGGCTGTCAAAGTCCAGGGAAAATCCTGAGGAAGATGAAGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCAGAGAAACCCTGCAAAGGAGTCCCTAGAGACACCTAGTAATGGTCGAATTGACATAAAACAGTTGATAGCAA  148
                                                                   ||.|||||.||||||||.|
Sbjct    1  -------------------------------------------------------ATGAAACAATTGATAGCCA  19

Query  149  AGAAGATAAAGTTGACAGCAGAGGCAGAGGAATTGAAGCCATTTTTTATGAAGGAAGTTGGCAGTCACTTTGAT  222
            ||||||....||||.||||||||||.|||||..||||||||.|.|||||||||||||||||..|.|||||.|||
Sbjct   20  AGAAGAGGCTGTTGGCAGCAGAGGCGGAGGAGCTGAAGCCACTATTTATGAAGGAAGTTGGGTGCCACTTCGAT  93

Query  223  GATTTTGTGACCAATCTCATTGAAAAGTCAGCATCATTAGATAATGGTGGGTGCGCTCTCACAACCTTTTCTGT  296
            ||.|||||||||||.||||||||||||||.|||||..|.||.|||||||||||.||.|||||||||||.||..|
Sbjct   94  GACTTTGTGACCAACCTCATTGAAAAGTCCGCATCGCTGGACAATGGTGGGTGTGCACTCACAACCTTCTCCAT  167

Query  297  TCTTGAAGGAGAGAAAAACAACCATAGAGCGAAGGATTTGAGAGCACCTCCAGAACAAGGAAAGATTTTTATTG  370
            ||||||||.|..||||||.|||||.|||||.||.|||.||||||||||||||||||||||.||||||||||||.
Sbjct  168  TCTTGAAGAAATGAAAAAGAACCACAGAGCCAAAGATCTGAGAGCACCTCCAGAACAAGGGAAGATTTTTATTT  241

Query  371  CAAGGCGCTCTCTCTTAGATGAACTGCTTGAAGTGGACCACATCAGAACAATATATCACATGTTTATTGCCCTC  444
            ||||||..|||||.|||||.||.|||.|||||||||||||||||||||||||.||.||||||||.||.||.|||
Sbjct  242  CAAGGCAGTCTCTTTTAGACGAGCTGTTTGAAGTGGACCACATCAGAACAATTTACCACATGTTCATCGCACTC  315

Query  445  CTCATTCTCTTTATCCTCAGCACACTTGTAGTAGATTACATTGATGAAGGAAGGCTGGTGCTTGAGTTCAGCCT  518
            |||||.||.||..||||||||||..|.||.||.||.|||||.|||||||||||||||||.||||||||||..||
Sbjct  316  CTCATCCTATTCGTCCTCAGCACGATCGTCGTGGACTACATCGATGAAGGAAGGCTGGTACTTGAGTTCAATCT  389

Query  519  CCTGTCTTATGCTTTTGGCAAATTTCCTACCGTTGTTTGGACCTGGTGGATCATGTTCCTGTCTACATTTTCAG  592
            ||||.|.|||||||||||||||||||||||.|||.|||||||.||||||..||||||||||||||||.|.|||.
Sbjct  390  CCTGGCCTATGCTTTTGGCAAATTTCCTACTGTTATTTGGACATGGTGGGCCATGTTCCTGTCTACACTGTCAA  463

Query  593  TTCCCTATTTTCTGTTTCAAC-ATTGGGCCACTGGCTATAGCAAGAGTTCTCATCCGCTGATCCGTTCTCTCTT  665
            |.||||||||.|||||.||.| ||.||.|||| ||.||.||||||||||||||.||..|||||..|||.||..|
Sbjct  464  TCCCCTATTTCCTGTTCCAGCGATGGGCCCAC-GGTTACAGCAAGAGTTCTCACCCATTGATCTATTCCCTTGT  536

Query  666  CCATGGCTTTCTTTTCATGATCTTCCAGATTGGAGTTCTAGGTTTTGGACCAACATATGTTGTGTTAGCATATA  739
            |||||||||.||.|||.|..||||.||..||||||||||||||||||..||||||||.|||||.||||||||.|
Sbjct  537  CCATGGCTTGCTCTTCTTAGTCTTTCAACTTGGAGTTCTAGGTTTTGTGCCAACATACGTTGTCTTAGCATACA  610

Query  740  CACTGCCACCAGCTTCCCGGTTCATCATTATATTCGAGCAGATTCGTTTTGTAATGAAGGCCCACTCATTTGTC  813
            |||||||||||||.|||||||||||..|.|||.|.||.|||||||||||..||||||||||.||||||||||||
Sbjct  611  CACTGCCACCAGCCTCCCGGTTCATTCTGATACTGGAACAGATTCGTTTGATAATGAAGGCTCACTCATTTGTC  684

Query  814  AGAGAGAACGTGCCTCGGGTACTAAATTCAGCTAAGGAGAAATCAAGCACTGTTCCAATACCTACAGTCAACCA  887
            ||||||||..|.||.||.|||||||||.||||.||||||||||||||||..|.||||.||||.|||||||||||
Sbjct  685  AGAGAGAATATCCCACGAGTACTAAATGCAGCCAAGGAGAAATCAAGCAAAGATCCACTACCCACAGTCAACCA  758

Query  888  GTATTTGTACTTCTTATTTGCTCCTACCCTTATCTACCGTGACAGCTATCCCAGGAATCCCACTGTAAGATGGG  961
            |||..||||||||.|.|||||.|||||.|||||.|||||.||||.|||.||.||||.|||.|||||||||||||
Sbjct  759  GTACCTGTACTTCCTGTTTGCGCCTACACTTATTTACCGAGACAACTACCCAAGGACTCCTACTGTAAGATGGG  832

Query  962  GTTATGTCGCTATGAAGTTTGCACAGGTCTTTGGTTGCTTTTTCTATGTGTACTACATCTTTGAAAGGCTTTGT  1035
            ||||||||||||||.|||||..||||||.|||||.|||.|.||.||||||||||||||||||||.||.||.|||
Sbjct  833  GTTATGTCGCTATGCAGTTTTTACAGGTGTTTGGCTGCCTGTTTTATGTGTACTACATCTTTGAGAGACTCTGT  906

Query 1036  GCCCCCTTGTTTCGGAATATCAAACAGGAGCCCTTCAGCGCTCGTGTTCTGGTCCTATGTGTATTTAACTCCAT  1109
            |||||..|.||.||||||||||||||||||||||||||.||||||||.||||||||.|||||.|||||||||||
Sbjct  907  GCCCCACTATTCCGGAATATCAAACAGGAGCCCTTCAGTGCTCGTGTCCTGGTCCTGTGTGTGTTTAACTCCAT  980

Query 1110  CTTGCCAGGTGTGCTGATTCTCTTCCTTACTTTTTTTGCCTTTTTGCACTGCTGGCTCAATGCCTTTGCTGAGA  1183
            ||||||||||||..||||.||.||||||.|.||.||||||||||||||||||||||||||||||||||||||||
Sbjct  981  CTTGCCAGGTGTCTTGATACTGTTCCTTTCGTTCTTTGCCTTTTTGCACTGCTGGCTCAATGCCTTTGCTGAGA  1054

Query 1184  TGTTACGCTTTGGTGACAGGATGTTCTATAAGGATTGGTGGAACTCCACGTCATACTCCAACTATTATAGAACC  1257
            |||||||||||||||||||||||||.||||||||.|||||||||||.||.||||||||||||||.||.||.|||
Sbjct 1055  TGTTACGCTTTGGTGACAGGATGTTTTATAAGGACTGGTGGAACTCTACATCATACTCCAACTACTACAGGACC  1128

Query 1258  TGGAATGTGGTGGTCCATGACTGGCTATATTACTATGCTTACAAGGACTTTCTCTGGTTTTTCTCCAAGAGATT  1331
            |||||.||||||||.||.||||||||.||.|||||||.||||||.|||.|.||||||||||||||.|||||.||
Sbjct 1129  TGGAACGTGGTGGTGCACGACTGGCTCTACTACTATGTTTACAAAGACCTGCTCTGGTTTTTCTCGAAGAGGTT  1202

Query 1332  CAAATCTGCTGCCATGTTAGCTGTCTTTGCTGTATCTGCTGTAGTACACGAATATGCCTTGGCTGTTTGCTTGA  1405
            |||||||||.||||||.|.||.|||||.||..|.||.|||||.||.|||||.||||||.|.||..|.|||.|||
Sbjct 1203  CAAATCTGCCGCCATGCTGGCCGTCTTCGCCCTGTCGGCTGTGGTGCACGAGTATGCCCTCGCCATCTGCCTGA  1276

Query 1406  GCTTTTTCTATCCCGTGCTCTTCGTGCTCTTCATGTTCTTTGGAATGGCTTTCAACTTCATTGTCAATGATAGT  1479
            |.|..|||||.||.||||||||||||||||||||||||||||||||||||||.|||||||||||.||.||.|||
Sbjct 1277  GTTACTTCTACCCGGTGCTCTTCGTGCTCTTCATGTTCTTTGGAATGGCTTTTAACTTCATTGTTAACGACAGT  1350

Query 1480  CGGAAAAAGCCGATTTGGAATGTTCTGATGTGGACTTCTCTTTTCTTGGGCAATGGAGTCTTACTCTGCTTTTA  1553
            |||||||.|||.||.|||||..|..||.|.|||.|||||||.|||.|||||.|||||.||.|.||.||||||||
Sbjct 1351  CGGAAAAGGCCAATCTGGAACATCATGGTTTGGGCTTCTCTGTTCCTGGGCTATGGACTCATTCTGTGCTTTTA  1424

Query 1554  TTCTCAAGAATGGTATGCACGTCAGCACTGTCCTCTGAAAAATCCCACATTTTTGGATTATGTCCGGCCACGTT  1627
            |||||||||.||||||||.||.|||||||||||||||||.||.||.||||||.||||||||||||||||.||..
Sbjct 1425  TTCTCAAGAGTGGTATGCCCGCCAGCACTGTCCTCTGAAGAACCCTACATTTCTGGATTATGTCCGGCCGCGGA  1498

Query 1628  CCTGGACTTGTCGTTACGTGTTTG  1651
            |||||||||||||.||||||||| 
Sbjct 1499  CCTGGACTTGTCGGTACGTGTTT-  1521

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