Nucleotide Global Alignment

Description

Query:
TRCN0000488732
Subject:
NM_001204275.1
Aligned Length:
2999
Identities:
2370
Gaps:
277

Alignment

Query    1  ATGCACAGCCCCGGCGCTGATGGGACCCAGGTGAGCCCGGGTGCCCACTACTGCAGCCCCACTGGCGCAGGCTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCCAGGCCCTGTGCAGACACACCAGGCCCTCAGCCGCAGCCCATGGACCTGCGGGTGGGCCAGCGGCCCCCAG  148
                                                       |||||||||||||||||||||||||||.|.|
Sbjct    1  -------------------------------------------ATGGACCTGCGGGTGGGCCAGCGGCCCACGG  31

Query  149  TGGAGCCCCCACCAGAGCCCACATTGCTGGCCCTGCAGCGTCCCCAGCGCCTGCACCACCACCTCTTCCTAGCA  222
            |||||||||||||||||||..|..|||||.|||||||.|..|||||.||||||||||.|||.||||||||.|||
Sbjct   32  TGGAGCCCCCACCAGAGCCTGCGCTGCTGACCCTGCAACACCCCCAACGCCTGCACCGCCATCTCTTCCTGGCA  105

Query  223  GGC---CTGCAGCAGCAGCGCTCGGTGGAGCCCATGAGGCTCTCCATGGACACGCCGATGCCCGAGTTGCAGGT  293
            |||   |..|||||.||||||||.|..||||||||||||||||||||||||.|.||.|||||.|||.||||||.
Sbjct  106  GGCTTACACCAGCAACAGCGCTCAGCCGAGCCCATGAGGCTCTCCATGGACCCACCAATGCCGGAGCTGCAGGG  179

Query  294  GGGACCCCAGGAACAAGAGCTGCGGCAGCTTCTCCACAAGGACAAGAGCAAGCGAAGTGCTGTAGCCAGCAGCG  367
            |||||..|||||.|||||.||.|||||.||||||.|.||.||||||||||||||||||||.|||||||||||.|
Sbjct  180  GGGACAGCAGGAGCAAGAACTTCGGCAACTTCTCAATAAAGACAAGAGCAAGCGAAGTGCCGTAGCCAGCAGTG  253

Query  368  TGGTCAAGCAGAAGCTAGCGGAGGTGATTCTGAAAAAACAGCAGGCGGCCCTAGAAAGAACAGTCCATCCCAAC  441
            ||||||||||||||||.||.||.|||||.|||||.|||||||||||.|||||.||.||||||||||||||||.|
Sbjct  254  TGGTCAAGCAGAAGCTGGCTGAAGTGATCCTGAAGAAACAGCAGGCAGCCCTTGAGAGAACAGTCCATCCCAGC  327

Query  442  AGCCCCGGCATTCCCTACAGAACCCTGGAGCCCCTGGAGACGGAAGGAGCCACCCGCTCCATGCTCAGCAGCTT  515
            ||||||.|.||||||||||||||.||.||||||.||||.||.||.||.||..||||||||.||||.||||||||
Sbjct  328  AGCCCCAGTATTCCCTACAGAACTCTTGAGCCCTTGGACACAGAGGGTGCTGCCCGCTCCGTGCTTAGCAGCTT  401

Query  516  TTTGCCTCCTGTTCCCAGCCTGCCCAGTGACCCCCCAGAGCAC-TTCCCTCTGCGCAAGACAGTCTCTGAGCCC  588
            ..||||||||||||||||||||||||.|||.|||||.||.||| |||||| ||||.||.|||||.|||||.|||
Sbjct  402  CCTGCCTCCTGTTCCCAGCCTGCCCACTGAACCCCCGGAACACTTTCCCT-TGCGTAAAACAGTGTCTGAACCC  474

Query  589  AACCTGAAGCTGCGCTATAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAATCCACTGCTCCGAAAGGAGAGTGC  662
            |||||||||.|||||||.||.||||||||.|||||||||.|..|.||||||||.||||||.|.|||||||||||
Sbjct  475  AACCTGAAGTTGCGCTACAAACCCAAGAAATCCCTGGAGAGACGCAAGAATCCCCTGCTCAGGAAGGAGAGTGC  548

Query  663  GCCCCCCAGCCTCCGGCGGCGGCCCGCAGAGACCCTCGGAGACTCCTCCCCAAGTAGTAGCAGCACGCCCGCAT  736
            .||.||||||||.|||.||.||||.||.||||||||.|||||.||||||||.||||||||||||||.|||||.|
Sbjct  549  CCCGCCCAGCCTTCGGAGGAGGCCTGCCGAGACCCTTGGAGATTCCTCCCCCAGTAGTAGCAGCACACCCGCGT  622

Query  737  CAGGGTGCAGCTCCCCCAATGACAGCGAGCACGGCCCCAATCCCATCCTGGGCTCGGA----------------  794
            ||||||||||||||||.||||||||||||||.|||||.||.||...|||.|||||.||                
Sbjct  623  CAGGGTGCAGCTCCCCTAATGACAGCGAGCATGGCCCTAACCCTGCCCTAGGCTCAGAGGCGCTCTTGGGCCAG  696

Query  795  --------------------------------------------------------------------------  794
                                                                                      
Sbjct  697  CGGCTGCGGCTGCAGGAGACTTCTCTGGCCCCGTTCGCTTTGCCGACAGTGTCCTTGCTGCCCGCAATCACACT  770

Query  795  ---------------------GGCTGACAGTGACCGCAGGACCCATCCGACTCTGGGCCCTCGGGGGCCAATCC  847
                                 ||||||..|||||||||||||||||.|.|||.|.|||||||||||.||..|.|
Sbjct  771  GGGGCTGCCTGCCCCTGCCAGGGCTGATGGTGACCGCAGGACCCATTCAACTTTAGGCCCTCGGGGTCCTGTAC  844

Query  848  TGGGGAGCCCCCACACTCCCCTCTTCCTGCCCCATGGCTTGGAGCCCGAGGCTGGGGGCACCTTGCCCTCTCGC  921
            ||||||.||||||..|||||||||||||||.|||.||..|||||||.|||||||||||||||||.|||||||||
Sbjct  845  TGGGGAACCCCCATGCTCCCCTCTTCCTGCACCACGGTCTGGAGCCAGAGGCTGGGGGCACCTTACCCTCTCGC  918

Query  922  CTGCAGCCCATTCTCCTCCTGGACCCCTCAGGCTCTCATGCCCCGCTGCTGACTGTGCCCGGGCTTGGGCCCTT  995
            |||||.|||||||||||.|||||||||||||.||||||||||||.|||..|||||||||.||.|||||||||||
Sbjct  919  CTGCAACCCATTCTCCTGCTGGACCCCTCAGTCTCTCATGCCCCACTGTGGACTGTGCCTGGCCTTGGGCCCTT  992

Query  996  GCCCTTCCACTTTGCCCAGTCCTTAATGACCACCGAGCGGCTCTCTGGGTCAGGCCTCCACTGGCCACTGAGCC  1069
            |||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||..|.|||||.|.||
Sbjct  993  GCCCTTCCACTTTGCCCAGCCCTTACTGACCACCGAGCGGCTCTCTGGGTCAGGCCTCCATCGACCACTTAACC  1066

Query 1070  GGACTCGCTCAGAGCCCCTGCCCCCCAGTGCCACCGCTCCCCCACCGCCGGGCCCCATGCAGCCCCGCCTGGAG  1143
            ||||.|||||||||||||||||||||||.|||||.||..||||.|.||.||.||||.||||||||||||.|||.
Sbjct 1067  GGACCCGCTCAGAGCCCCTGCCCCCCAGCGCCACAGCCTCCCCTCTGCTGGCCCCCCTGCAGCCCCGCCAGGAT  1140

Query 1144  CAGCTCAAAACTCACGTCCAGGTGATCA---------------------AGAGGTCAGCCAAGCCGAGTGAGAA  1196
            |.|||||||.|||||||||||.||||||                     |||||.|.||||||||.||||||||
Sbjct 1141  CGGCTCAAACCTCACGTCCAGCTGATCAAGCCAGCCATCTCCCCTCCCCAGAGGCCTGCCAAGCCCAGTGAGAA  1214

Query 1197  GCCCCGGCTGCGGCAGATACCCTCGGCTGAAGACCTGGAGACAGATGGCGGGGGACCGGGCCAGGTGGTGGACG  1270
            ||||||.|||||.|||||||||||||||||.|||||.|||||||||||.||||||..|||.|...|||.|.|.|
Sbjct 1215  GCCCCGACTGCGACAGATACCCTCGGCTGAGGACCTAGAGACAGATGGTGGGGGAGTGGGACCTATGGCGAATG  1288

Query 1271  ATGGCCTGGAGCACAGGGAGCTGGGCCATGGGCAGCCTGAGGCCAGAGGCCCCGCTCCTCTCCAGCAGCACCCT  1344
            ||||||||||.||.||||||...||||.|||||..|||||||.|||||||.||..|.||||.||||||||.|..
Sbjct 1289  ATGGCCTGGAACATAGGGAGTCAGGCCGTGGGCCTCCTGAGGGCAGAGGCTCCATTTCTCTGCAGCAGCATCAA  1362

Query 1345  CAGGTGTTGCTCTGGGAACAGCAGCGACTGGCTGGGCGGCTCCCCCGGGGCAGCACCGGGGACACTGTGCTGCT  1418
            ||||||...|.||||||.|||||||..||.||.|||||||||.|.|.|||.|||.||||||||.|.||||||.|
Sbjct 1363  CAGGTGCCACCCTGGGAGCAGCAGCATCTAGCCGGGCGGCTCTCTCAGGGAAGCCCCGGGGACTCCGTGCTGAT  1436

Query 1419  TCCTCTGGCCCAGGGTGGGCACCGGCCTCTGTCCCGGGCTCAGTCTTCCCCAGCCGCACCTGCCTCACTG-TCA  1491
            .|||||||||||||.|||.||||||||.||||||.|..|.||||||||||||||.|||||||.|||.||| |.|
Sbjct 1437  ACCTCTGGCCCAGGTTGGACACCGGCCCCTGTCCAGAACCCAGTCTTCCCCAGCAGCACCTGTCTCCCTGCTGA  1510

Query 1492  GCCCCAGAGCCTGCCAGCCAGGCCCGAGTCCTCTCCAGCTCAGAGACCCCTGCCAGGACCCTGCCCTTCACCAC  1565
            | |||||||||..||.|.|||.|||.|||||||..||||||||||||.||||                  |.||
Sbjct 1511  G-CCCAGAGCCCACCTGTCAGACCCAAGTCCTCAACAGCTCAGAGACACCTG------------------CTAC  1565

Query 1566  AGGGCTGATCTATGACTCGGTCATGCTGAAGCACCAGTGCTCCTGCGGTGACAACAGCAGGCACCCGGAGCACG  1639
            |||||||.|||||||||||||.||||||||.|||||.||.|||||.||.||||||||||.|||.||.|||||.|
Sbjct 1566  AGGGCTGGTCTATGACTCGGTGATGCTGAAACACCAATGTTCCTGTGGAGACAACAGCAAGCATCCCGAGCATG  1639

Query 1640  CCGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAGCGGGGGCTCCGGAGCCAGTGTGAGTGTCTCCGAGGC  1713
            |.|||||||||||||||||||||||||||||||||||.|||||.|||||.||||||||||||||||||||||||
Sbjct 1640  CAGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAACGGGGTCTCCGCAGCCAGTGTGAGTGTCTCCGAGGC  1713

Query 1714  CGGAAGGCCTCCCTGGAAGAGCTGCAGTCGGTCCACTCTGAGCGGCACGTGCTCCTCTACGGCACCAACCCGCT  1787
            ||.|||||.|||||.||.|||||||||||.|||||||||||.|||||||||||||||||||||||.|||||.||
Sbjct 1714  CGAAAGGCTTCCCTAGAGGAGCTGCAGTCAGTCCACTCTGAACGGCACGTGCTCCTCTACGGCACGAACCCACT  1787

Query 1788  CAGCCGCCTCAAACTGGACAACGGGAAGCTGGCAGGGCTCCTGGCACAGCGGATGTTTGTGATGCTGCCCTGTG  1861
            ||||||||||||||||||.|||||||||||..||||.||||||||||||||||.||||||||||||.|||||||
Sbjct 1788  CAGCCGCCTCAAACTGGATAACGGGAAGCTTACAGGACTCCTGGCACAGCGGACGTTTGTGATGCTACCCTGTG  1861

Query 1862  GTGGGGTTGGGGTGGACACTGACACCATCTGGAATGAGCTTCATTCCTCCAATGCAGCCCGCTGGGCCGCTGGC  1935
            |.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||||||||||||||.||.|||
Sbjct 1862  GCGGGGTTGGGGTCGATACTGACACCATCTGGAACGAGCTGCATTCCTCCAATGCAGCCCGCTGGGCTGCGGGC  1935

Query 1936  AGTGTCACTGACCTCGCCTTCAAAGTGGCTTCTCGTGAGCTAAAGAATGGTTTCGCTGTGGTGCGGCCCCCAGG  2009
            ||||||||.|||||.|||||||||||.|||||.||.|||||.||||||||.||.|||||||||||.|||||.||
Sbjct 1936  AGTGTCACCGACCTTGCCTTCAAAGTAGCTTCCCGAGAGCTGAAGAATGGCTTTGCTGTGGTGCGACCCCCGGG  2009

Query 2010  ACACCATGCAGATCATTCAACAGCCATGGGCTTCTGCTTCTTCAACTCAGTGGCCATCGCCTGCCGGCAGCTGC  2083
            ||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||.|||||.|
Sbjct 2010  ACACCATGCAGATCATTCTACAGCCATGGGCTTCTGCTTCTTCAACTCCGTGGCCATCGCCTGCCGACAGCTAC  2083

Query 2084  AACAGCAGAGCAAGGCCAGCAAGATCCTCATTGTAGACTGGGACGTGCACCATGGCAACGGCACCCAGCAAACC  2157
            |.||.||..||||.||||||||||||||||||||.||||||||.||.|||||||||||||||||.|||||.||.
Sbjct 2084  AGCAACACGGCAAAGCCAGCAAGATCCTCATTGTTGACTGGGATGTTCACCATGGCAACGGCACACAGCAGACT  2157

Query 2158  TTCTACCAAGACCCCAGTGTGCTCTACATCTCCCTGCATCGCCATGACGACGGCAACTTCTTCCCGGGGAGTGG  2231
            ||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||.||.|||||
Sbjct 2158  TTCTACCAGGACCCCAGTGTGCTCTACATTTCCCTTCATCGCCATGACGACGGCAACTTCTTCCCAGGCAGTGG  2231

Query 2232  GGCTGTGGATGAGGTAGGGGCTGGCAGCGGTGAGGGCTTCAATGTCAATGTGGCCTGGGCTGGAGGTCTGGACC  2305
            |||.|||||||||||.||..|||||||.||.|||||||||||||||||.|||||.||||||||.||..||||.|
Sbjct 2232  GGCCGTGGATGAGGTGGGAACTGGCAGTGGCGAGGGCTTCAATGTCAACGTGGCTTGGGCTGGGGGCTTGGATC  2305

Query 2306  CCCCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAGGATAGTCGTGATGCCCATCGCCCGAGAGTTCTCTCCA  2379
            |.|||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||..|||||
Sbjct 2306  CACCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAGGATAGTGGTGATGCCCATTGCCCGAGAGTTTGCTCCA  2379

Query 2380  GACCTAGTCCTGGTGTCTGCTGGATTTGATGCTGCTGAGGGTCACCCGGCCCCACTGGGTGGCTACCATGTTTC  2453
            |||||.|||||||||||||||||.|||||||||||.|||||||||||.|||||.||||||||||||||||||||
Sbjct 2380  GACCTGGTCCTGGTGTCTGCTGGGTTTGATGCTGCGGAGGGTCACCCAGCCCCGCTGGGTGGCTACCATGTTTC  2453

Query 2454  TGCCAAATGTTTTGGATACATGACGCAGCAACTGATGAACCTGGCAGGAGGCGCAGTGGTGCTGGCCTTGGAGG  2527
            |||||||||||||||.||||||||||||||..||||||||.|||||||||||||.||||||.|||||||.||||
Sbjct 2454  TGCCAAATGTTTTGGGTACATGACGCAGCAGTTGATGAACTTGGCAGGAGGCGCCGTGGTGTTGGCCTTAGAGG  2527

Query 2528  GTGGCCATGACCTCACAGCCATCTGTGACGCCTCTGAGGCCTGTGTGGCTGCTCTTCTGGGTAACAGGGTGGAT  2601
            ||||.|||||||||||.|||||||||||.|||||.|||||||||||.||||||||||||||.||||.||||||.
Sbjct 2528  GTGGACATGACCTCACGGCCATCTGTGATGCCTCGGAGGCCTGTGTAGCTGCTCTTCTGGGCAACAAGGTGGAC  2601

Query 2602  CCCCTTTCAGAAGAAGGCTGGAAACAGAAACCCAACCTCAATGCCATCCGCTCTCTGGAGGCCGTGATCCGGGT  2675
            |||||||||||||||.||||||||||||||||||||||||.||||||||||||.|||||.||.|||.||.||||
Sbjct 2602  CCCCTTTCAGAAGAAAGCTGGAAACAGAAACCCAACCTCAGTGCCATCCGCTCGCTGGAAGCTGTGGTCAGGGT  2675

Query 2676  GCACAGTAAATACTGGGGCTGCATGCAGCGCCTGGCCTCCTGTCCAGACTCCTGGGTGCCTAGAGTGCCAGGGG  2749
            ||||||.||||||||||||||||||||||||.|||||||||||||||||||||||.|.||.||||||||.||.|
Sbjct 2676  GCACAGGAAATACTGGGGCTGCATGCAGCGCTTGGCCTCCTGTCCAGACTCCTGGCTACCCAGAGTGCCGGGAG  2749

Query 2750  CTGACAAAGAAGAAGTGGAGGCAGTGACCGCACTGGCGTCCCTCTCTGTGGGCATCCTGGCTGAAGATAGGCCC  2823
            |||   |.|.|||||||||.||.||||||||.|||||.|||||.|||||||||||||||||||||||.||||||
Sbjct 2750  CTG---ATGCAGAAGTGGAAGCCGTGACCGCGCTGGCATCCCTTTCTGTGGGCATCCTGGCTGAAGACAGGCCC  2820

Query 2824  TCGGAGCAGCTGGTGGAGGAGGAAGAACCTATGAATCTC  2862
            |||||||.|||||||||.|||||||||||.|||||.|||
Sbjct 2821  TCGGAGCGGCTGGTGGAAGAGGAAGAACCCATGAACCTC  2859

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