Nucleotide Global Alignment

Description

Query:
TRCN0000488732
Subject:
NM_001204276.1
Aligned Length:
2978
Identities:
2370
Gaps:
256

Alignment

Query    1  ATGCACAGCCCCGGCGCTGATGGGACCCAGGTGAGCCCGGGTGCCCACTACTGCAGCCCCACTGGCGCAGGCTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCCAGGCCCTGTGCAGACACACCAGGCCCTCAGCCGCAGCCCATGGACCTGCGGGTGGGCCAGCGGCCCCCAG  148
                                                       |||||||||||||||||||||||||||.|.|
Sbjct    1  -------------------------------------------ATGGACCTGCGGGTGGGCCAGCGGCCCACGG  31

Query  149  TGGAGCCCCCACCAGAGCCCACATTGCTGGCCCTGCAGCGTCCCCAGCGCCTGCACCACCACCTCTTCCTAGCA  222
            |||||||||||||||||||..|..|||||.|||||||.|..|||||.||||||||||.|||.||||||||.|||
Sbjct   32  TGGAGCCCCCACCAGAGCCTGCGCTGCTGACCCTGCAACACCCCCAACGCCTGCACCGCCATCTCTTCCTGGCA  105

Query  223  GGC---CTGCAGCAGCAGCGCTCGGTGGAGCCCATGAGGCTCTCCATGGACACGCCGATGCCCGAGTTGCAGGT  293
            |||   |..|||||.||||||||.|..||||||||||||||||||||||||.|.||.|||||.|||.||||||.
Sbjct  106  GGCTTACACCAGCAACAGCGCTCAGCCGAGCCCATGAGGCTCTCCATGGACCCACCAATGCCGGAGCTGCAGGG  179

Query  294  GGGACCCCAGGAACAAGAGCTGCGGCAGCTTCTCCACAAGGACAAGAGCAAGCGAAGTGCTGTAGCCAGCAGCG  367
            |||||..|||||.|||||.||.|||||.||||||.|.||.||||||||||||||||||||.|||||||||||.|
Sbjct  180  GGGACAGCAGGAGCAAGAACTTCGGCAACTTCTCAATAAAGACAAGAGCAAGCGAAGTGCCGTAGCCAGCAGTG  253

Query  368  TGGTCAAGCAGAAGCTAGCGGAGGTGATTCTGAAAAAACAGCAGGCGGCCCTAGAAAGAACAGTCCATCCCAAC  441
            ||||||||||||||||.||.||.|||||.|||||.|||||||||||.|||||.||.||||||||||||||||.|
Sbjct  254  TGGTCAAGCAGAAGCTGGCTGAAGTGATCCTGAAGAAACAGCAGGCAGCCCTTGAGAGAACAGTCCATCCCAGC  327

Query  442  AGCCCCGGCATTCCCTACAGAACCCTGGAGCCCCTGGAGACGGAAGGAGCCACCCGCTCCATGCTCAGCAGCTT  515
            ||||||.|.||||||||||||||.||.||||||.||||.||.||.||.||..||||||||.||||.||||||||
Sbjct  328  AGCCCCAGTATTCCCTACAGAACTCTTGAGCCCTTGGACACAGAGGGTGCTGCCCGCTCCGTGCTTAGCAGCTT  401

Query  516  TTTGCCTCCTGTTCCCAGCCTGCCCAGTGACCCCCCAGAGCAC-TTCCCTCTGCGCAAGACAGTCTCTGAGCCC  588
            ..||||||||||||||||||||||||.|||.|||||.||.||| |||||| ||||.||.|||||.|||||.|||
Sbjct  402  CCTGCCTCCTGTTCCCAGCCTGCCCACTGAACCCCCGGAACACTTTCCCT-TGCGTAAAACAGTGTCTGAACCC  474

Query  589  AACCTGAAGCTGCGCTATAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAATCCACTGCTCCGAAAGGAGAGTGC  662
            |||||||||.|||||||.||.||||||||.|||||||||.|..|.||||||||.||||||.|.|||||||||||
Sbjct  475  AACCTGAAGTTGCGCTACAAACCCAAGAAATCCCTGGAGAGACGCAAGAATCCCCTGCTCAGGAAGGAGAGTGC  548

Query  663  GCCCCCCAGCCTCCGGCGGCGGCCCGCAGAGACCCTCGGAGACTCCTCCCCAAGTAGTAGCAGCACGCCCGCAT  736
            .||.||||||||.|||.||.||||.||.||||||||.|||||.||||||||.||||||||||||||.|||||.|
Sbjct  549  CCCGCCCAGCCTTCGGAGGAGGCCTGCCGAGACCCTTGGAGATTCCTCCCCCAGTAGTAGCAGCACACCCGCGT  622

Query  737  CAGGGTGCAGCTCCCCCAATGACAGCGAGCACGGCCCCAATCCCATCCTGGGCTCGGA----------------  794
            ||||||||||||||||.||||||||||||||.|||||.||.||...|||.|||||.||                
Sbjct  623  CAGGGTGCAGCTCCCCTAATGACAGCGAGCATGGCCCTAACCCTGCCCTAGGCTCAGAGGCGCTCTTGGGCCAG  696

Query  795  --------------------------------------------------------------------------  794
                                                                                      
Sbjct  697  CGGCTGCGGCTGCAGGAGACTTCTCTGGCCCCGTTCGCTTTGCCGACAGTGTCCTTGCTGCCCGCAATCACACT  770

Query  795  ---------------------GGCTGACAGTGACCGCAGGACCCATCCGACTCTGGGCCCTCGGGGGCCAATCC  847
                                 ||||||..|||||||||||||||||.|.|||.|.|||||||||||.||..|.|
Sbjct  771  GGGGCTGCCTGCCCCTGCCAGGGCTGATGGTGACCGCAGGACCCATTCAACTTTAGGCCCTCGGGGTCCTGTAC  844

Query  848  TGGGGAGCCCCCACACTCCCCTCTTCCTGCCCCATGGCTTGGAGCCCGAGGCTGGGGGCACCTTGCCCTCTCGC  921
            ||||||.||||||..|||||||||||||||.|||.||..|||||||.|||||||||||||||||.|||||||||
Sbjct  845  TGGGGAACCCCCATGCTCCCCTCTTCCTGCACCACGGTCTGGAGCCAGAGGCTGGGGGCACCTTACCCTCTCGC  918

Query  922  CTGCAGCCCATTCTCCTCCTGGACCCCTCAGGCTCTCATGCCCCGCTGCTGACTGTGCCCGGGCTTGGGCCCTT  995
            |||||.|||||||||||.|||||||||||||.||||||||||||.|||..|||||||||.||.|||||||||||
Sbjct  919  CTGCAACCCATTCTCCTGCTGGACCCCTCAGTCTCTCATGCCCCACTGTGGACTGTGCCTGGCCTTGGGCCCTT  992

Query  996  GCCCTTCCACTTTGCCCAGTCCTTAATGACCACCGAGCGGCTCTCTGGGTCAGGCCTCCACTGGCCACTGAGCC  1069
            |||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||..|.|||||.|.||
Sbjct  993  GCCCTTCCACTTTGCCCAGCCCTTACTGACCACCGAGCGGCTCTCTGGGTCAGGCCTCCATCGACCACTTAACC  1066

Query 1070  GGACTCGCTCAGAGCCCCTGCCCCCCAGTGCCACCGCTCCCCCACCGCCGGGCCCCATGCAGCCCCGCCTGGAG  1143
            ||||.|||||||||||||||||||||||.|||||.||..||||.|.||.||.||||.||||||||||||.|||.
Sbjct 1067  GGACCCGCTCAGAGCCCCTGCCCCCCAGCGCCACAGCCTCCCCTCTGCTGGCCCCCCTGCAGCCCCGCCAGGAT  1140

Query 1144  CAGCTCAAAACTCACGTCCAGGTGATCAAGAGGTCAGCCAAGCCGAGTGAGAAGCCCCGGCTGCGGCAGATACC  1217
            |.|||||||.|||||||||||.|||||||||||.|.||||||||.||||||||||||||.|||||.||||||||
Sbjct 1141  CGGCTCAAACCTCACGTCCAGCTGATCAAGAGGCCTGCCAAGCCCAGTGAGAAGCCCCGACTGCGACAGATACC  1214

Query 1218  CTCGGCTGAAGACCTGGAGACAGATGGCGGGGGACCGGGCCAGGTGGTGGACGATGGCCTGGAGCACAGGGAGC  1291
            |||||||||.|||||.|||||||||||.||||||..|||.|...|||.|.|.|||||||||||.||.||||||.
Sbjct 1215  CTCGGCTGAGGACCTAGAGACAGATGGTGGGGGAGTGGGACCTATGGCGAATGATGGCCTGGAACATAGGGAGT  1288

Query 1292  TGGGCCATGGGCAGCCTGAGGCCAGAGGCCCCGCTCCTCTCCAGCAGCACCCTCAGGTGTTGCTCTGGGAACAG  1365
            ..||||.|||||..|||||||.|||||||.||..|.||||.||||||||.|..||||||...|.||||||.|||
Sbjct 1289  CAGGCCGTGGGCCTCCTGAGGGCAGAGGCTCCATTTCTCTGCAGCAGCATCAACAGGTGCCACCCTGGGAGCAG  1362

Query 1366  CAGCGACTGGCTGGGCGGCTCCCCCGGGGCAGCACCGGGGACACTGTGCTGCTTCCTCTGGCCCAGGGTGGGCA  1439
            ||||..||.||.|||||||||.|.|.|||.|||.||||||||.|.||||||.|.|||||||||||||.|||.||
Sbjct 1363  CAGCATCTAGCCGGGCGGCTCTCTCAGGGAAGCCCCGGGGACTCCGTGCTGATACCTCTGGCCCAGGTTGGACA  1436

Query 1440  CCGGCCTCTGTCCCGGGCTCAGTCTTCCCCAGCCGCACCTGCCTCACTG-TCAGCCCCAGAGCCTGCCAGCCAG  1512
            ||||||.||||||.|..|.||||||||||||||.|||||||.|||.||| |.|| |||||||||..||.|.|||
Sbjct 1437  CCGGCCCCTGTCCAGAACCCAGTCTTCCCCAGCAGCACCTGTCTCCCTGCTGAG-CCCAGAGCCCACCTGTCAG  1509

Query 1513  GCCCGAGTCCTCTCCAGCTCAGAGACCCCTGCCAGGACCCTGCCCTTCACCACAGGGCTGATCTATGACTCGGT  1586
            .|||.|||||||..||||||||||||.||||                  |.|||||||||.|||||||||||||
Sbjct 1510  ACCCAAGTCCTCAACAGCTCAGAGACACCTG------------------CTACAGGGCTGGTCTATGACTCGGT  1565

Query 1587  CATGCTGAAGCACCAGTGCTCCTGCGGTGACAACAGCAGGCACCCGGAGCACGCCGGCCGCATCCAGAGCATCT  1660
            .||||||||.|||||.||.|||||.||.||||||||||.|||.||.|||||.||.|||||||||||||||||||
Sbjct 1566  GATGCTGAAACACCAATGTTCCTGTGGAGACAACAGCAAGCATCCCGAGCATGCAGGCCGCATCCAGAGCATCT  1639

Query 1661  GGTCCCGGCTGCAGGAGCGGGGGCTCCGGAGCCAGTGTGAGTGTCTCCGAGGCCGGAAGGCCTCCCTGGAAGAG  1734
            ||||||||||||||||.|||||.|||||.||||||||||||||||||||||||||.|||||.|||||.||.|||
Sbjct 1640  GGTCCCGGCTGCAGGAACGGGGTCTCCGCAGCCAGTGTGAGTGTCTCCGAGGCCGAAAGGCTTCCCTAGAGGAG  1713

Query 1735  CTGCAGTCGGTCCACTCTGAGCGGCACGTGCTCCTCTACGGCACCAACCCGCTCAGCCGCCTCAAACTGGACAA  1808
            ||||||||.|||||||||||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.||
Sbjct 1714  CTGCAGTCAGTCCACTCTGAACGGCACGTGCTCCTCTACGGCACGAACCCACTCAGCCGCCTCAAACTGGATAA  1787

Query 1809  CGGGAAGCTGGCAGGGCTCCTGGCACAGCGGATGTTTGTGATGCTGCCCTGTGGTGGGGTTGGGGTGGACACTG  1882
            |||||||||..||||.||||||||||||||||.||||||||||||.||||||||.|||||||||||.||.||||
Sbjct 1788  CGGGAAGCTTACAGGACTCCTGGCACAGCGGACGTTTGTGATGCTACCCTGTGGCGGGGTTGGGGTCGATACTG  1861

Query 1883  ACACCATCTGGAATGAGCTTCATTCCTCCAATGCAGCCCGCTGGGCCGCTGGCAGTGTCACTGACCTCGCCTTC  1956
            |||||||||||||.|||||.||||||||||||||||||||||||||.||.|||||||||||.|||||.||||||
Sbjct 1862  ACACCATCTGGAACGAGCTGCATTCCTCCAATGCAGCCCGCTGGGCTGCGGGCAGTGTCACCGACCTTGCCTTC  1935

Query 1957  AAAGTGGCTTCTCGTGAGCTAAAGAATGGTTTCGCTGTGGTGCGGCCCCCAGGACACCATGCAGATCATTCAAC  2030
            |||||.|||||.||.|||||.||||||||.||.|||||||||||.|||||.||||||||||||||||||||.||
Sbjct 1936  AAAGTAGCTTCCCGAGAGCTGAAGAATGGCTTTGCTGTGGTGCGACCCCCGGGACACCATGCAGATCATTCTAC  2009

Query 2031  AGCCATGGGCTTCTGCTTCTTCAACTCAGTGGCCATCGCCTGCCGGCAGCTGCAACAGCAGAGCAAGGCCAGCA  2104
            |||||||||||||||||||||||||||.|||||||||||||||||.|||||.||.||.||..||||.|||||||
Sbjct 2010  AGCCATGGGCTTCTGCTTCTTCAACTCCGTGGCCATCGCCTGCCGACAGCTACAGCAACACGGCAAAGCCAGCA  2083

Query 2105  AGATCCTCATTGTAGACTGGGACGTGCACCATGGCAACGGCACCCAGCAAACCTTCTACCAAGACCCCAGTGTG  2178
            |||||||||||||.||||||||.||.|||||||||||||||||.|||||.||.||||||||.||||||||||||
Sbjct 2084  AGATCCTCATTGTTGACTGGGATGTTCACCATGGCAACGGCACACAGCAGACTTTCTACCAGGACCCCAGTGTG  2157

Query 2179  CTCTACATCTCCCTGCATCGCCATGACGACGGCAACTTCTTCCCGGGGAGTGGGGCTGTGGATGAGGTAGGGGC  2252
            ||||||||.|||||.|||||||||||||||||||||||||||||.||.||||||||.|||||||||||.||..|
Sbjct 2158  CTCTACATTTCCCTTCATCGCCATGACGACGGCAACTTCTTCCCAGGCAGTGGGGCCGTGGATGAGGTGGGAAC  2231

Query 2253  TGGCAGCGGTGAGGGCTTCAATGTCAATGTGGCCTGGGCTGGAGGTCTGGACCCCCCCATGGGGGATCCTGAGT  2326
            ||||||.||.|||||||||||||||||.|||||.||||||||.||..||||.||.|||||||||||||||||||
Sbjct 2232  TGGCAGTGGCGAGGGCTTCAATGTCAACGTGGCTTGGGCTGGGGGCTTGGATCCACCCATGGGGGATCCTGAGT  2305

Query 2327  ACCTGGCTGCTTTCAGGATAGTCGTGATGCCCATCGCCCGAGAGTTCTCTCCAGACCTAGTCCTGGTGTCTGCT  2400
            ||||||||||||||||||||||.|||||||||||.|||||||||||..||||||||||.|||||||||||||||
Sbjct 2306  ACCTGGCTGCTTTCAGGATAGTGGTGATGCCCATTGCCCGAGAGTTTGCTCCAGACCTGGTCCTGGTGTCTGCT  2379

Query 2401  GGATTTGATGCTGCTGAGGGTCACCCGGCCCCACTGGGTGGCTACCATGTTTCTGCCAAATGTTTTGGATACAT  2474
            ||.|||||||||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||.|||||
Sbjct 2380  GGGTTTGATGCTGCGGAGGGTCACCCAGCCCCGCTGGGTGGCTACCATGTTTCTGCCAAATGTTTTGGGTACAT  2453

Query 2475  GACGCAGCAACTGATGAACCTGGCAGGAGGCGCAGTGGTGCTGGCCTTGGAGGGTGGCCATGACCTCACAGCCA  2548
            |||||||||..||||||||.|||||||||||||.||||||.|||||||.||||||||.|||||||||||.||||
Sbjct 2454  GACGCAGCAGTTGATGAACTTGGCAGGAGGCGCCGTGGTGTTGGCCTTAGAGGGTGGACATGACCTCACGGCCA  2527

Query 2549  TCTGTGACGCCTCTGAGGCCTGTGTGGCTGCTCTTCTGGGTAACAGGGTGGATCCCCTTTCAGAAGAAGGCTGG  2622
            |||||||.|||||.|||||||||||.||||||||||||||.||||.||||||.|||||||||||||||.|||||
Sbjct 2528  TCTGTGATGCCTCGGAGGCCTGTGTAGCTGCTCTTCTGGGCAACAAGGTGGACCCCCTTTCAGAAGAAAGCTGG  2601

Query 2623  AAACAGAAACCCAACCTCAATGCCATCCGCTCTCTGGAGGCCGTGATCCGGGTGCACAGTAAATACTGGGGCTG  2696
            |||||||||||||||||||.||||||||||||.|||||.||.|||.||.||||||||||.||||||||||||||
Sbjct 2602  AAACAGAAACCCAACCTCAGTGCCATCCGCTCGCTGGAAGCTGTGGTCAGGGTGCACAGGAAATACTGGGGCTG  2675

Query 2697  CATGCAGCGCCTGGCCTCCTGTCCAGACTCCTGGGTGCCTAGAGTGCCAGGGGCTGACAAAGAAGAAGTGGAGG  2770
            ||||||||||.|||||||||||||||||||||||.|.||.||||||||.||.||||   |.|.|||||||||.|
Sbjct 2676  CATGCAGCGCTTGGCCTCCTGTCCAGACTCCTGGCTACCCAGAGTGCCGGGAGCTG---ATGCAGAAGTGGAAG  2746

Query 2771  CAGTGACCGCACTGGCGTCCCTCTCTGTGGGCATCCTGGCTGAAGATAGGCCCTCGGAGCAGCTGGTGGAGGAG  2844
            |.||||||||.|||||.|||||.|||||||||||||||||||||||.|||||||||||||.|||||||||.|||
Sbjct 2747  CCGTGACCGCGCTGGCATCCCTTTCTGTGGGCATCCTGGCTGAAGACAGGCCCTCGGAGCGGCTGGTGGAAGAG  2820

Query 2845  GAAGAACCTATGAATCTC  2862
            ||||||||.|||||.|||
Sbjct 2821  GAAGAACCCATGAACCTC  2838

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