Nucleotide Global Alignment

Description

Query:
TRCN0000488732
Subject:
NM_001204277.1
Aligned Length:
2978
Identities:
2370
Gaps:
262

Alignment

Query    1  ATGCACAGCCCCGGCGCTGATGGGACCCAGGTGAGCCCGGGTGCCCACTACTGCAGCCCCACTGGCGCAGGCTG  74
            |||||||||||||||||            ||...||||   ||||     ||.||||                 
Sbjct    1  ATGCACAGCCCCGGCGC------------GGGCTGCCC---TGCC-----CTCCAGC-----------------  37

Query   75  CCCCAGGCCCTGTGCAGACACACCAGGCCCTCAGCCGCAGCCCATGGACCTGCGGGTGGGCCAGCGGCCCCCAG  148
                          ||||||||||||||.|||||||.||.||||||||||||||||||||||||||||||.|.|
Sbjct   38  --------------CAGACACACCAGGCTCTCAGCCCCAACCCATGGACCTGCGGGTGGGCCAGCGGCCCACGG  97

Query  149  TGGAGCCCCCACCAGAGCCCACATTGCTGGCCCTGCAGCGTCCCCAGCGCCTGCACCACCACCTCTTCCTAGCA  222
            |||||||||||||||||||..|..|||||.|||||||.|..|||||.||||||||||.|||.||||||||.|||
Sbjct   98  TGGAGCCCCCACCAGAGCCTGCGCTGCTGACCCTGCAACACCCCCAACGCCTGCACCGCCATCTCTTCCTGGCA  171

Query  223  GGC---CTGCAGCAGCAGCGCTCGGTGGAGCCCATGAGGCTCTCCATGGACACGCCGATGCCCGAGTTGCAGGT  293
            |||   |..|||||.||||||||.|..||||||||||||||||||||||||.|.||.|||||.|||.||||||.
Sbjct  172  GGCTTACACCAGCAACAGCGCTCAGCCGAGCCCATGAGGCTCTCCATGGACCCACCAATGCCGGAGCTGCAGGG  245

Query  294  GGGACCCCAGGAACAAGAGCTGCGGCAGCTTCTCCACAAGGACAAGAGCAAGCGAAGTGCTGTAGCCAGCAGCG  367
            |||||..|||||.|||||.||.|||||.||||||.|.||.||||||||||||||||||||.|||||||||||.|
Sbjct  246  GGGACAGCAGGAGCAAGAACTTCGGCAACTTCTCAATAAAGACAAGAGCAAGCGAAGTGCCGTAGCCAGCAGTG  319

Query  368  TGGTCAAGCAGAAGCTAGCGGAGGTGATTCTGAAAAAACAGCAGGCGGCCCTAGAAAGAACAGTCCATCCCAAC  441
            ||||||||||||||||.||.||.|||||.|||||.|||||||||||.|||||.||.||||||||||||||||.|
Sbjct  320  TGGTCAAGCAGAAGCTGGCTGAAGTGATCCTGAAGAAACAGCAGGCAGCCCTTGAGAGAACAGTCCATCCCAGC  393

Query  442  AGCCCCGGCATTCCCTACAGAACCCTGGAGCCCCTGGAGACGGAAGGAGCCACCCGCTCCATGCTCAGCAGCTT  515
            ||||||.|.||||||||                                                         
Sbjct  394  AGCCCCAGTATTCCCTA---------------------------------------------------------  410

Query  516  TTTGCCTCCTGTTCCCAGCCTGCCCAGTGACCCCCCAGAGCAC-TTCCCTCTGCGCAAGACAGTCTCTGAGCCC  588
                           |||||||||||.|||.|||||.||.||| |||||| ||||.||.|||||.|||||.|||
Sbjct  411  ---------------CAGCCTGCCCACTGAACCCCCGGAACACTTTCCCT-TGCGTAAAACAGTGTCTGAACCC  468

Query  589  AACCTGAAGCTGCGCTATAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAATCCACTGCTCCGAAAGGAGAGTGC  662
            |||||||||.|||||||.||.||||||||.|||||||||.|..|.||||||||.||||||.|.|||||||||||
Sbjct  469  AACCTGAAGTTGCGCTACAAACCCAAGAAATCCCTGGAGAGACGCAAGAATCCCCTGCTCAGGAAGGAGAGTGC  542

Query  663  GCCCCCCAGCCTCCGGCGGCGGCCCGCAGAGACCCTCGGAGACTCCTCCCCAAGTAGTAGCAGCACGCCCGCAT  736
            .||.||||||||.|||.||.||||.||.||||||||.|||||.||||||||.||||||||||||||.|||||.|
Sbjct  543  CCCGCCCAGCCTTCGGAGGAGGCCTGCCGAGACCCTTGGAGATTCCTCCCCCAGTAGTAGCAGCACACCCGCGT  616

Query  737  CAGGGTGCAGCTCCCCCAATGACAGCGAGCACGGCCCCAATCCCATCCTGGGCTCGGA----------------  794
            ||||||||||||||||.||||||||||||||.|||||.||.||...|||.|||||.||                
Sbjct  617  CAGGGTGCAGCTCCCCTAATGACAGCGAGCATGGCCCTAACCCTGCCCTAGGCTCAGAGGCGCTCTTGGGCCAG  690

Query  795  --------------------------------------------------------------------------  794
                                                                                      
Sbjct  691  CGGCTGCGGCTGCAGGAGACTTCTCTGGCCCCGTTCGCTTTGCCGACAGTGTCCTTGCTGCCCGCAATCACACT  764

Query  795  ---------------------GGCTGACAGTGACCGCAGGACCCATCCGACTCTGGGCCCTCGGGGGCCAATCC  847
                                 ||||||..|||||||||||||||||.|.|||.|.|||||||||||.||..|.|
Sbjct  765  GGGGCTGCCTGCCCCTGCCAGGGCTGATGGTGACCGCAGGACCCATTCAACTTTAGGCCCTCGGGGTCCTGTAC  838

Query  848  TGGGGAGCCCCCACACTCCCCTCTTCCTGCCCCATGGCTTGGAGCCCGAGGCTGGGGGCACCTTGCCCTCTCGC  921
            ||||||.||||||..|||||||||||||||.|||.||..|||||||.|||||||||||||||||.|||||||||
Sbjct  839  TGGGGAACCCCCATGCTCCCCTCTTCCTGCACCACGGTCTGGAGCCAGAGGCTGGGGGCACCTTACCCTCTCGC  912

Query  922  CTGCAGCCCATTCTCCTCCTGGACCCCTCAGGCTCTCATGCCCCGCTGCTGACTGTGCCCGGGCTTGGGCCCTT  995
            |||||.|||||||||||.|||||||||||||.||||||||||||.|||..|||||||||.||.|||||||||||
Sbjct  913  CTGCAACCCATTCTCCTGCTGGACCCCTCAGTCTCTCATGCCCCACTGTGGACTGTGCCTGGCCTTGGGCCCTT  986

Query  996  GCCCTTCCACTTTGCCCAGTCCTTAATGACCACCGAGCGGCTCTCTGGGTCAGGCCTCCACTGGCCACTGAGCC  1069
            |||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||..|.|||||.|.||
Sbjct  987  GCCCTTCCACTTTGCCCAGCCCTTACTGACCACCGAGCGGCTCTCTGGGTCAGGCCTCCATCGACCACTTAACC  1060

Query 1070  GGACTCGCTCAGAGCCCCTGCCCCCCAGTGCCACCGCTCCCCCACCGCCGGGCCCCATGCAGCCCCGCCTGGAG  1143
            ||||.|||||||||||||||||||||||.|||||.||..||||.|.||.||.||||.||||||||||||.|||.
Sbjct 1061  GGACCCGCTCAGAGCCCCTGCCCCCCAGCGCCACAGCCTCCCCTCTGCTGGCCCCCCTGCAGCCCCGCCAGGAT  1134

Query 1144  CAGCTCAAAACTCACGTCCAGGTGATCAAGAGGTCAGCCAAGCCGAGTGAGAAGCCCCGGCTGCGGCAGATACC  1217
            |.|||||||.|||||||||||.|||||||||||.|.||||||||.||||||||||||||.|||||.||||||||
Sbjct 1135  CGGCTCAAACCTCACGTCCAGCTGATCAAGAGGCCTGCCAAGCCCAGTGAGAAGCCCCGACTGCGACAGATACC  1208

Query 1218  CTCGGCTGAAGACCTGGAGACAGATGGCGGGGGACCGGGCCAGGTGGTGGACGATGGCCTGGAGCACAGGGAGC  1291
            |||||||||.|||||.|||||||||||.||||||..|||.|...|||.|.|.|||||||||||.||.||||||.
Sbjct 1209  CTCGGCTGAGGACCTAGAGACAGATGGTGGGGGAGTGGGACCTATGGCGAATGATGGCCTGGAACATAGGGAGT  1282

Query 1292  TGGGCCATGGGCAGCCTGAGGCCAGAGGCCCCGCTCCTCTCCAGCAGCACCCTCAGGTGTTGCTCTGGGAACAG  1365
            ..||||.|||||..|||||||.|||||||.||..|.||||.||||||||.|..||||||...|.||||||.|||
Sbjct 1283  CAGGCCGTGGGCCTCCTGAGGGCAGAGGCTCCATTTCTCTGCAGCAGCATCAACAGGTGCCACCCTGGGAGCAG  1356

Query 1366  CAGCGACTGGCTGGGCGGCTCCCCCGGGGCAGCACCGGGGACACTGTGCTGCTTCCTCTGGCCCAGGGTGGGCA  1439
            ||||..||.||.|||||||||.|.|.|||.|||.||||||||.|.||||||.|.|||||||||||||.|||.||
Sbjct 1357  CAGCATCTAGCCGGGCGGCTCTCTCAGGGAAGCCCCGGGGACTCCGTGCTGATACCTCTGGCCCAGGTTGGACA  1430

Query 1440  CCGGCCTCTGTCCCGGGCTCAGTCTTCCCCAGCCGCACCTGCCTCACTG-TCAGCCCCAGAGCCTGCCAGCCAG  1512
            ||||||.||||||.|..|.||||||||||||||.|||||||.|||.||| |.|| |||||||||..||.|.|||
Sbjct 1431  CCGGCCCCTGTCCAGAACCCAGTCTTCCCCAGCAGCACCTGTCTCCCTGCTGAG-CCCAGAGCCCACCTGTCAG  1503

Query 1513  GCCCGAGTCCTCTCCAGCTCAGAGACCCCTGCCAGGACCCTGCCCTTCACCACAGGGCTGATCTATGACTCGGT  1586
            .|||.|||||||..||||||||||||.||||                  |.|||||||||.|||||||||||||
Sbjct 1504  ACCCAAGTCCTCAACAGCTCAGAGACACCTG------------------CTACAGGGCTGGTCTATGACTCGGT  1559

Query 1587  CATGCTGAAGCACCAGTGCTCCTGCGGTGACAACAGCAGGCACCCGGAGCACGCCGGCCGCATCCAGAGCATCT  1660
            .||||||||.|||||.||.|||||.||.||||||||||.|||.||.|||||.||.|||||||||||||||||||
Sbjct 1560  GATGCTGAAACACCAATGTTCCTGTGGAGACAACAGCAAGCATCCCGAGCATGCAGGCCGCATCCAGAGCATCT  1633

Query 1661  GGTCCCGGCTGCAGGAGCGGGGGCTCCGGAGCCAGTGTGAGTGTCTCCGAGGCCGGAAGGCCTCCCTGGAAGAG  1734
            ||||||||||||||||.|||||.|||||.||||||||||||||||||||||||||.|||||.|||||.||.|||
Sbjct 1634  GGTCCCGGCTGCAGGAACGGGGTCTCCGCAGCCAGTGTGAGTGTCTCCGAGGCCGAAAGGCTTCCCTAGAGGAG  1707

Query 1735  CTGCAGTCGGTCCACTCTGAGCGGCACGTGCTCCTCTACGGCACCAACCCGCTCAGCCGCCTCAAACTGGACAA  1808
            ||||||||.|||||||||||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.||
Sbjct 1708  CTGCAGTCAGTCCACTCTGAACGGCACGTGCTCCTCTACGGCACGAACCCACTCAGCCGCCTCAAACTGGATAA  1781

Query 1809  CGGGAAGCTGGCAGGGCTCCTGGCACAGCGGATGTTTGTGATGCTGCCCTGTGGTGGGGTTGGGGTGGACACTG  1882
            |||||||||..||||.||||||||||||||||.||||||||||||.||||||||.|||||||||||.||.||||
Sbjct 1782  CGGGAAGCTTACAGGACTCCTGGCACAGCGGACGTTTGTGATGCTACCCTGTGGCGGGGTTGGGGTCGATACTG  1855

Query 1883  ACACCATCTGGAATGAGCTTCATTCCTCCAATGCAGCCCGCTGGGCCGCTGGCAGTGTCACTGACCTCGCCTTC  1956
            |||||||||||||.|||||.||||||||||||||||||||||||||.||.|||||||||||.|||||.||||||
Sbjct 1856  ACACCATCTGGAACGAGCTGCATTCCTCCAATGCAGCCCGCTGGGCTGCGGGCAGTGTCACCGACCTTGCCTTC  1929

Query 1957  AAAGTGGCTTCTCGTGAGCTAAAGAATGGTTTCGCTGTGGTGCGGCCCCCAGGACACCATGCAGATCATTCAAC  2030
            |||||.|||||.||.|||||.||||||||.||.|||||||||||.|||||.||||||||||||||||||||.||
Sbjct 1930  AAAGTAGCTTCCCGAGAGCTGAAGAATGGCTTTGCTGTGGTGCGACCCCCGGGACACCATGCAGATCATTCTAC  2003

Query 2031  AGCCATGGGCTTCTGCTTCTTCAACTCAGTGGCCATCGCCTGCCGGCAGCTGCAACAGCAGAGCAAGGCCAGCA  2104
            |||||||||||||||||||||||||||.|||||||||||||||||.|||||.||.||.||..||||.|||||||
Sbjct 2004  AGCCATGGGCTTCTGCTTCTTCAACTCCGTGGCCATCGCCTGCCGACAGCTACAGCAACACGGCAAAGCCAGCA  2077

Query 2105  AGATCCTCATTGTAGACTGGGACGTGCACCATGGCAACGGCACCCAGCAAACCTTCTACCAAGACCCCAGTGTG  2178
            |||||||||||||.||||||||.||.|||||||||||||||||.|||||.||.||||||||.||||||||||||
Sbjct 2078  AGATCCTCATTGTTGACTGGGATGTTCACCATGGCAACGGCACACAGCAGACTTTCTACCAGGACCCCAGTGTG  2151

Query 2179  CTCTACATCTCCCTGCATCGCCATGACGACGGCAACTTCTTCCCGGGGAGTGGGGCTGTGGATGAGGTAGGGGC  2252
            ||||||||.|||||.|||||||||||||||||||||||||||||.||.||||||||.|||||||||||.||..|
Sbjct 2152  CTCTACATTTCCCTTCATCGCCATGACGACGGCAACTTCTTCCCAGGCAGTGGGGCCGTGGATGAGGTGGGAAC  2225

Query 2253  TGGCAGCGGTGAGGGCTTCAATGTCAATGTGGCCTGGGCTGGAGGTCTGGACCCCCCCATGGGGGATCCTGAGT  2326
            ||||||.||.|||||||||||||||||.|||||.||||||||.||..||||.||.|||||||||||||||||||
Sbjct 2226  TGGCAGTGGCGAGGGCTTCAATGTCAACGTGGCTTGGGCTGGGGGCTTGGATCCACCCATGGGGGATCCTGAGT  2299

Query 2327  ACCTGGCTGCTTTCAGGATAGTCGTGATGCCCATCGCCCGAGAGTTCTCTCCAGACCTAGTCCTGGTGTCTGCT  2400
            ||||||||||||||||||||||.|||||||||||.|||||||||||..||||||||||.|||||||||||||||
Sbjct 2300  ACCTGGCTGCTTTCAGGATAGTGGTGATGCCCATTGCCCGAGAGTTTGCTCCAGACCTGGTCCTGGTGTCTGCT  2373

Query 2401  GGATTTGATGCTGCTGAGGGTCACCCGGCCCCACTGGGTGGCTACCATGTTTCTGCCAAATGTTTTGGATACAT  2474
            ||.|||||||||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||.|||||
Sbjct 2374  GGGTTTGATGCTGCGGAGGGTCACCCAGCCCCGCTGGGTGGCTACCATGTTTCTGCCAAATGTTTTGGGTACAT  2447

Query 2475  GACGCAGCAACTGATGAACCTGGCAGGAGGCGCAGTGGTGCTGGCCTTGGAGGGTGGCCATGACCTCACAGCCA  2548
            |||||||||..||||||||.|||||||||||||.||||||.|||||||.||||||||.|||||||||||.||||
Sbjct 2448  GACGCAGCAGTTGATGAACTTGGCAGGAGGCGCCGTGGTGTTGGCCTTAGAGGGTGGACATGACCTCACGGCCA  2521

Query 2549  TCTGTGACGCCTCTGAGGCCTGTGTGGCTGCTCTTCTGGGTAACAGGGTGGATCCCCTTTCAGAAGAAGGCTGG  2622
            |||||||.|||||.|||||||||||.||||||||||||||.||||.||||||.|||||||||||||||.|||||
Sbjct 2522  TCTGTGATGCCTCGGAGGCCTGTGTAGCTGCTCTTCTGGGCAACAAGGTGGACCCCCTTTCAGAAGAAAGCTGG  2595

Query 2623  AAACAGAAACCCAACCTCAATGCCATCCGCTCTCTGGAGGCCGTGATCCGGGTGCACAGTAAATACTGGGGCTG  2696
            |||||||||||||||||||.||||||||||||.|||||.||.|||.||.||||||||||.||||||||||||||
Sbjct 2596  AAACAGAAACCCAACCTCAGTGCCATCCGCTCGCTGGAAGCTGTGGTCAGGGTGCACAGGAAATACTGGGGCTG  2669

Query 2697  CATGCAGCGCCTGGCCTCCTGTCCAGACTCCTGGGTGCCTAGAGTGCCAGGGGCTGACAAAGAAGAAGTGGAGG  2770
            ||||||||||.|||||||||||||||||||||||.|.||.||||||||.||.||||   |.|.|||||||||.|
Sbjct 2670  CATGCAGCGCTTGGCCTCCTGTCCAGACTCCTGGCTACCCAGAGTGCCGGGAGCTG---ATGCAGAAGTGGAAG  2740

Query 2771  CAGTGACCGCACTGGCGTCCCTCTCTGTGGGCATCCTGGCTGAAGATAGGCCCTCGGAGCAGCTGGTGGAGGAG  2844
            |.||||||||.|||||.|||||.|||||||||||||||||||||||.|||||||||||||.|||||||||.|||
Sbjct 2741  CCGTGACCGCGCTGGCATCCCTTTCTGTGGGCATCCTGGCTGAAGACAGGCCCTCGGAGCGGCTGGTGGAAGAG  2814

Query 2845  GAAGAACCTATGAATCTC  2862
            ||||||||.|||||.|||
Sbjct 2815  GAAGAACCCATGAACCTC  2832

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