Nucleotide Global Alignment

Description

Query:
TRCN0000488732
Subject:
NM_001204278.1
Aligned Length:
2888
Identities:
2370
Gaps:
166

Alignment

Query    1  ATGCACAGCCCCGGCGCTGATGGGACCCAGGTGAGCCCGGGTGCCCACTACTGCAGCCCCACTGGCGCAGGCTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCCAGGCCCTGTGCAGACACACCAGGCCCTCAGCCGCAGCCCATGGACCTGCGGGTGGGCCAGCGGCCCCCAG  148
                                                       |||||||||||||||||||||||||||.|.|
Sbjct    1  -------------------------------------------ATGGACCTGCGGGTGGGCCAGCGGCCCACGG  31

Query  149  TGGAGCCCCCACCAGAGCCCACATTGCTGGCCCTGCAGCGTCCCCAGCGCCTGCACCACCACCTCTTCCTAGCA  222
            |||||||||||||||||||..|..|||||.|||||||.|..|||||.||||||||||.|||.||||||||.|||
Sbjct   32  TGGAGCCCCCACCAGAGCCTGCGCTGCTGACCCTGCAACACCCCCAACGCCTGCACCGCCATCTCTTCCTGGCA  105

Query  223  GGC---CTGCAGCAGCAGCGCTCGGTGGAGCCCATGAGGCTCTCCATGGACACGCCGATGCCCGAGTTGCAGGT  293
            |||   |..|||||.||||||||.|..||||||||||||||||||||||||.|.||.|||||.|||.||||||.
Sbjct  106  GGCTTACACCAGCAACAGCGCTCAGCCGAGCCCATGAGGCTCTCCATGGACCCACCAATGCCGGAGCTGCAGGG  179

Query  294  GGGACCCCAGGAACAAGAGCTGCGGCAGCTTCTCCACAAGGACAAGAGCAAGCGAAGTGCTGTAGCCAGCAGCG  367
            |||||..|||||.|||||.||.|||||.||||||.|.||.||||||||||||||||||||.|||||||||||.|
Sbjct  180  GGGACAGCAGGAGCAAGAACTTCGGCAACTTCTCAATAAAGACAAGAGCAAGCGAAGTGCCGTAGCCAGCAGTG  253

Query  368  TGGTCAAGCAGAAGCTAGCGGAGGTGATTCTGAAAAAACAGCAGGCGGCCCTAGAAAGAACAGTCCATCCCAAC  441
            ||||||||||||||||.||.||.|||||.|||||.|||||||||||.|||||.||.||||||||||||||||.|
Sbjct  254  TGGTCAAGCAGAAGCTGGCTGAAGTGATCCTGAAGAAACAGCAGGCAGCCCTTGAGAGAACAGTCCATCCCAGC  327

Query  442  AGCCCCGGCATTCCCTACAGAACCCTGGAGCCCCTGGAGACGGAAGGAGCCACCCGCTCCATGCTCAGCAGCTT  515
            ||||||.|.||||||||||||||.||.||||||.||||.||.||.||.||..||||||||.||||.||||||||
Sbjct  328  AGCCCCAGTATTCCCTACAGAACTCTTGAGCCCTTGGACACAGAGGGTGCTGCCCGCTCCGTGCTTAGCAGCTT  401

Query  516  TTTGCCTCCTGTTCCCAGCCTGCCCAGTGACCCCCCAGAGCAC-TTCCCTCTGCGCAAGACAGTCTCTGAGCCC  588
            ..||||||||||||||||||||||||.|||.|||||.||.||| |||||| ||||.||.|||||.|||||.|||
Sbjct  402  CCTGCCTCCTGTTCCCAGCCTGCCCACTGAACCCCCGGAACACTTTCCCT-TGCGTAAAACAGTGTCTGAACCC  474

Query  589  AACCTGAAGCTGCGCTATAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAATCCACTGCTCCGAAAGGAGAGTGC  662
            |||||||||.|||||||.||.||||||||.|||||||||.|..|.||||||||.||||||.|.|||||||||||
Sbjct  475  AACCTGAAGTTGCGCTACAAACCCAAGAAATCCCTGGAGAGACGCAAGAATCCCCTGCTCAGGAAGGAGAGTGC  548

Query  663  GCCCCCCAGCCTCCGGCGGCGGCCCGCAGAGACCCTCGGAGACTCCTCCCCAAGTAGTAGCAGCACGCCCGCAT  736
            .||.||||||||.|||.||.||||.||.||||||||.|||||.||||||||.||||||||||||||.|||||.|
Sbjct  549  CCCGCCCAGCCTTCGGAGGAGGCCTGCCGAGACCCTTGGAGATTCCTCCCCCAGTAGTAGCAGCACACCCGCGT  622

Query  737  CAGGGTGCAGCTCCCCCAATGACAGCGAGCACGGCCCCAATCCCATCCTGGGCTCGGAGGCTGACAGTGACCGC  810
            ||||||||||||||||.||||||||||||||.|||||.||.||...|||.|||||.||||||||..||||||||
Sbjct  623  CAGGGTGCAGCTCCCCTAATGACAGCGAGCATGGCCCTAACCCTGCCCTAGGCTCAGAGGCTGATGGTGACCGC  696

Query  811  AGGACCCATCCGACTCTGGGCCCTCGGGGGCCAATCCTGGGGAGCCCCCACACTCCCCTCTTCCTGCCCCATGG  884
            |||||||||.|.|||.|.|||||||||||.||..|.|||||||.||||||..|||||||||||||||.|||.||
Sbjct  697  AGGACCCATTCAACTTTAGGCCCTCGGGGTCCTGTACTGGGGAACCCCCATGCTCCCCTCTTCCTGCACCACGG  770

Query  885  CTTGGAGCCCGAGGCTGGGGGCACCTTGCCCTCTCGCCTGCAGCCCATTCTCCTCCTGGACCCCTCAGGCTCTC  958
            ..|||||||.|||||||||||||||||.||||||||||||||.|||||||||||.|||||||||||||.|||||
Sbjct  771  TCTGGAGCCAGAGGCTGGGGGCACCTTACCCTCTCGCCTGCAACCCATTCTCCTGCTGGACCCCTCAGTCTCTC  844

Query  959  ATGCCCCGCTGCTGACTGTGCCCGGGCTTGGGCCCTTGCCCTTCCACTTTGCCCAGTCCTTAATGACCACCGAG  1032
            |||||||.|||..|||||||||.||.||||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct  845  ATGCCCCACTGTGGACTGTGCCTGGCCTTGGGCCCTTGCCCTTCCACTTTGCCCAGCCCTTACTGACCACCGAG  918

Query 1033  CGGCTCTCTGGGTCAGGCCTCCACTGGCCACTGAGCCGGACTCGCTCAGAGCCCCTGCCCCCCAGTGCCACCGC  1106
            |||||||||||||||||||||||..|.|||||.|.||||||.|||||||||||||||||||||||.|||||.||
Sbjct  919  CGGCTCTCTGGGTCAGGCCTCCATCGACCACTTAACCGGACCCGCTCAGAGCCCCTGCCCCCCAGCGCCACAGC  992

Query 1107  TCCCCCACCGCCGGGCCCCATGCAGCCCCGCCTGGAGCAGCTCAAAACTCACGTCCAGGTGATCA---------  1171
            ..||||.|.||.||.||||.||||||||||||.|||.|.|||||||.|||||||||||.||||||         
Sbjct  993  CTCCCCTCTGCTGGCCCCCCTGCAGCCCCGCCAGGATCGGCTCAAACCTCACGTCCAGCTGATCAAGCCAGCCA  1066

Query 1172  ------------AGAGGTCAGCCAAGCCGAGTGAGAAGCCCCGGCTGCGGCAGATACCCTCGGCTGAAGACCTG  1233
                        |||||.|.||||||||.||||||||||||||.|||||.|||||||||||||||||.|||||.
Sbjct 1067  TCTCCCCTCCCCAGAGGCCTGCCAAGCCCAGTGAGAAGCCCCGACTGCGACAGATACCCTCGGCTGAGGACCTA  1140

Query 1234  GAGACAGATGGCGGGGGACCGGGCCAGGTGGTGGACGATGGCCTGGAGCACAGGGAGCTGGGCCATGGGCAGCC  1307
            |||||||||||.||||||..|||.|...|||.|.|.|||||||||||.||.||||||...||||.|||||..||
Sbjct 1141  GAGACAGATGGTGGGGGAGTGGGACCTATGGCGAATGATGGCCTGGAACATAGGGAGTCAGGCCGTGGGCCTCC  1214

Query 1308  TGAGGCCAGAGGCCCCGCTCCTCTCCAGCAGCACCCTCAGGTGTTGCTCTGGGAACAGCAGCGACTGGCTGGGC  1381
            |||||.|||||||.||..|.||||.||||||||.|..||||||...|.||||||.|||||||..||.||.||||
Sbjct 1215  TGAGGGCAGAGGCTCCATTTCTCTGCAGCAGCATCAACAGGTGCCACCCTGGGAGCAGCAGCATCTAGCCGGGC  1288

Query 1382  GGCTCCCCCGGGGCAGCACCGGGGACACTGTGCTGCTTCCTCTGGCCCAGGGTGGGCACCGGCCTCTGTCCCGG  1455
            |||||.|.|.|||.|||.||||||||.|.||||||.|.|||||||||||||.|||.||||||||.||||||.|.
Sbjct 1289  GGCTCTCTCAGGGAAGCCCCGGGGACTCCGTGCTGATACCTCTGGCCCAGGTTGGACACCGGCCCCTGTCCAGA  1362

Query 1456  GCTCAGTCTTCCCCAGCCGCACCTGCCTCACTG-TCAGCCCCAGAGCCTGCCAGCCAGGCCCGAGTCCTCTCCA  1528
            .|.||||||||||||||.|||||||.|||.||| |.|| |||||||||..||.|.|||.|||.|||||||..||
Sbjct 1363  ACCCAGTCTTCCCCAGCAGCACCTGTCTCCCTGCTGAG-CCCAGAGCCCACCTGTCAGACCCAAGTCCTCAACA  1435

Query 1529  GCTCAGAGACCCCTGCCAGGACCCTGCCCTTCACCACAGGGCTGATCTATGACTCGGTCATGCTGAAGCACCAG  1602
            ||||||||||.||||                  |.|||||||||.|||||||||||||.||||||||.|||||.
Sbjct 1436  GCTCAGAGACACCTG------------------CTACAGGGCTGGTCTATGACTCGGTGATGCTGAAACACCAA  1491

Query 1603  TGCTCCTGCGGTGACAACAGCAGGCACCCGGAGCACGCCGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGA  1676
            ||.|||||.||.||||||||||.|||.||.|||||.||.|||||||||||||||||||||||||||||||||||
Sbjct 1492  TGTTCCTGTGGAGACAACAGCAAGCATCCCGAGCATGCAGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGA  1565

Query 1677  GCGGGGGCTCCGGAGCCAGTGTGAGTGTCTCCGAGGCCGGAAGGCCTCCCTGGAAGAGCTGCAGTCGGTCCACT  1750
            .|||||.|||||.||||||||||||||||||||||||||.|||||.|||||.||.|||||||||||.|||||||
Sbjct 1566  ACGGGGTCTCCGCAGCCAGTGTGAGTGTCTCCGAGGCCGAAAGGCTTCCCTAGAGGAGCTGCAGTCAGTCCACT  1639

Query 1751  CTGAGCGGCACGTGCTCCTCTACGGCACCAACCCGCTCAGCCGCCTCAAACTGGACAACGGGAAGCTGGCAGGG  1824
            ||||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.|||||||||||..||||.
Sbjct 1640  CTGAACGGCACGTGCTCCTCTACGGCACGAACCCACTCAGCCGCCTCAAACTGGATAACGGGAAGCTTACAGGA  1713

Query 1825  CTCCTGGCACAGCGGATGTTTGTGATGCTGCCCTGTGGTGGGGTTGGGGTGGACACTGACACCATCTGGAATGA  1898
            ||||||||||||||||.||||||||||||.||||||||.|||||||||||.||.|||||||||||||||||.||
Sbjct 1714  CTCCTGGCACAGCGGACGTTTGTGATGCTACCCTGTGGCGGGGTTGGGGTCGATACTGACACCATCTGGAACGA  1787

Query 1899  GCTTCATTCCTCCAATGCAGCCCGCTGGGCCGCTGGCAGTGTCACTGACCTCGCCTTCAAAGTGGCTTCTCGTG  1972
            |||.||||||||||||||||||||||||||.||.|||||||||||.|||||.|||||||||||.|||||.||.|
Sbjct 1788  GCTGCATTCCTCCAATGCAGCCCGCTGGGCTGCGGGCAGTGTCACCGACCTTGCCTTCAAAGTAGCTTCCCGAG  1861

Query 1973  AGCTAAAGAATGGTTTCGCTGTGGTGCGGCCCCCAGGACACCATGCAGATCATTCAACAGCCATGGGCTTCTGC  2046
            ||||.||||||||.||.|||||||||||.|||||.||||||||||||||||||||.||||||||||||||||||
Sbjct 1862  AGCTGAAGAATGGCTTTGCTGTGGTGCGACCCCCGGGACACCATGCAGATCATTCTACAGCCATGGGCTTCTGC  1935

Query 2047  TTCTTCAACTCAGTGGCCATCGCCTGCCGGCAGCTGCAACAGCAGAGCAAGGCCAGCAAGATCCTCATTGTAGA  2120
            |||||||||||.|||||||||||||||||.|||||.||.||.||..||||.||||||||||||||||||||.||
Sbjct 1936  TTCTTCAACTCCGTGGCCATCGCCTGCCGACAGCTACAGCAACACGGCAAAGCCAGCAAGATCCTCATTGTTGA  2009

Query 2121  CTGGGACGTGCACCATGGCAACGGCACCCAGCAAACCTTCTACCAAGACCCCAGTGTGCTCTACATCTCCCTGC  2194
            ||||||.||.|||||||||||||||||.|||||.||.||||||||.||||||||||||||||||||.|||||.|
Sbjct 2010  CTGGGATGTTCACCATGGCAACGGCACACAGCAGACTTTCTACCAGGACCCCAGTGTGCTCTACATTTCCCTTC  2083

Query 2195  ATCGCCATGACGACGGCAACTTCTTCCCGGGGAGTGGGGCTGTGGATGAGGTAGGGGCTGGCAGCGGTGAGGGC  2268
            ||||||||||||||||||||||||||||.||.||||||||.|||||||||||.||..|||||||.||.||||||
Sbjct 2084  ATCGCCATGACGACGGCAACTTCTTCCCAGGCAGTGGGGCCGTGGATGAGGTGGGAACTGGCAGTGGCGAGGGC  2157

Query 2269  TTCAATGTCAATGTGGCCTGGGCTGGAGGTCTGGACCCCCCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAG  2342
            |||||||||||.|||||.||||||||.||..||||.||.|||||||||||||||||||||||||||||||||||
Sbjct 2158  TTCAATGTCAACGTGGCTTGGGCTGGGGGCTTGGATCCACCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAG  2231

Query 2343  GATAGTCGTGATGCCCATCGCCCGAGAGTTCTCTCCAGACCTAGTCCTGGTGTCTGCTGGATTTGATGCTGCTG  2416
            ||||||.|||||||||||.|||||||||||..||||||||||.|||||||||||||||||.|||||||||||.|
Sbjct 2232  GATAGTGGTGATGCCCATTGCCCGAGAGTTTGCTCCAGACCTGGTCCTGGTGTCTGCTGGGTTTGATGCTGCGG  2305

Query 2417  AGGGTCACCCGGCCCCACTGGGTGGCTACCATGTTTCTGCCAAATGTTTTGGATACATGACGCAGCAACTGATG  2490
            ||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||||||||||||..|||||
Sbjct 2306  AGGGTCACCCAGCCCCGCTGGGTGGCTACCATGTTTCTGCCAAATGTTTTGGGTACATGACGCAGCAGTTGATG  2379

Query 2491  AACCTGGCAGGAGGCGCAGTGGTGCTGGCCTTGGAGGGTGGCCATGACCTCACAGCCATCTGTGACGCCTCTGA  2564
            |||.|||||||||||||.||||||.|||||||.||||||||.|||||||||||.|||||||||||.|||||.||
Sbjct 2380  AACTTGGCAGGAGGCGCCGTGGTGTTGGCCTTAGAGGGTGGACATGACCTCACGGCCATCTGTGATGCCTCGGA  2453

Query 2565  GGCCTGTGTGGCTGCTCTTCTGGGTAACAGGGTGGATCCCCTTTCAGAAGAAGGCTGGAAACAGAAACCCAACC  2638
            |||||||||.||||||||||||||.||||.||||||.|||||||||||||||.|||||||||||||||||||||
Sbjct 2454  GGCCTGTGTAGCTGCTCTTCTGGGCAACAAGGTGGACCCCCTTTCAGAAGAAAGCTGGAAACAGAAACCCAACC  2527

Query 2639  TCAATGCCATCCGCTCTCTGGAGGCCGTGATCCGGGTGCACAGTAAATACTGGGGCTGCATGCAGCGCCTGGCC  2712
            |||.||||||||||||.|||||.||.|||.||.||||||||||.||||||||||||||||||||||||.|||||
Sbjct 2528  TCAGTGCCATCCGCTCGCTGGAAGCTGTGGTCAGGGTGCACAGGAAATACTGGGGCTGCATGCAGCGCTTGGCC  2601

Query 2713  TCCTGTCCAGACTCCTGGGTGCCTAGAGTGCCAGGGGCTGACAAAGAAGAAGTGGAGGCAGTGACCGCACTGGC  2786
            ||||||||||||||||||.|.||.||||||||.||.||||   |.|.|||||||||.||.||||||||.|||||
Sbjct 2602  TCCTGTCCAGACTCCTGGCTACCCAGAGTGCCGGGAGCTG---ATGCAGAAGTGGAAGCCGTGACCGCGCTGGC  2672

Query 2787  GTCCCTCTCTGTGGGCATCCTGGCTGAAGATAGGCCCTCGGAGCAGCTGGTGGAGGAGGAAGAACCTATGAATC  2860
            .|||||.|||||||||||||||||||||||.|||||||||||||.|||||||||.|||||||||||.|||||.|
Sbjct 2673  ATCCCTTTCTGTGGGCATCCTGGCTGAAGACAGGCCCTCGGAGCGGCTGGTGGAAGAGGAAGAACCCATGAACC  2746

Query 2861  TC  2862
            ||
Sbjct 2747  TC  2748

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