Nucleotide Global Alignment

Description

Query:
TRCN0000488732
Subject:
NM_001204279.1
Aligned Length:
2888
Identities:
2311
Gaps:
238

Alignment

Query    1  ATGCACAGCCCCGGCGCTGATGGGACCCAGGTGAGCCCGGGTGCCCACTACTGCAGCCCCACTGGCGCAGGCTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCCAGGCCCTGTGCAGACACACCAGGCCCTCAGCCGCAGCCCATGGACCTGCGGGTGGGCCAGCGGCCCCCAG  148
                                                       |||||||||||||||||||||||||||.|.|
Sbjct    1  -------------------------------------------ATGGACCTGCGGGTGGGCCAGCGGCCCACGG  31

Query  149  TGGAGCCCCCACCAGAGCCCACATTGCTGGCCCTGCAGCGTCCCCAGCGCCTGCACCACCACCTCTTCCTAGCA  222
            |||||||||||||||||||..|..|||||.|||||||.|..|||||.||||||||||.|||.||||||||.|||
Sbjct   32  TGGAGCCCCCACCAGAGCCTGCGCTGCTGACCCTGCAACACCCCCAACGCCTGCACCGCCATCTCTTCCTGGCA  105

Query  223  GGC---CTGCAGCAGCAGCGCTCGGTGGAGCCCATGAGGCTCTCCATGGACACGCCGATGCCCGAGTTGCAGGT  293
            |||   |..|||||.||||||||.|..||||||||||||||||||||||||.|.||.|||||.|||.||||||.
Sbjct  106  GGCTTACACCAGCAACAGCGCTCAGCCGAGCCCATGAGGCTCTCCATGGACCCACCAATGCCGGAGCTGCAGGG  179

Query  294  GGGACCCCAGGAACAAGAGCTGCGGCAGCTTCTCCACAAGGACAAGAGCAAGCGAAGTGCTGTAGCCAGCAGCG  367
            |||||..|||||.|||||.||.|||||.||||||.|.||.||||||||||||||||||||.|||||||||||.|
Sbjct  180  GGGACAGCAGGAGCAAGAACTTCGGCAACTTCTCAATAAAGACAAGAGCAAGCGAAGTGCCGTAGCCAGCAGTG  253

Query  368  TGGTCAAGCAGAAGCTAGCGGAGGTGATTCTGAAAAAACAGCAGGCGGCCCTAGAAAGAACAGTCCATCCCAAC  441
            ||||||||||||||||.||.||.|||||.|||||.|||||||||||.|||||.||.||||||||||||||||.|
Sbjct  254  TGGTCAAGCAGAAGCTGGCTGAAGTGATCCTGAAGAAACAGCAGGCAGCCCTTGAGAGAACAGTCCATCCCAGC  327

Query  442  AGCCCCGGCATTCCCTACAGAACCCTGGAGCCCCTGGAGACGGAAGGAGCCACCCGCTCCATGCTCAGCAGCTT  515
            ||||||.|.||||||||                                                         
Sbjct  328  AGCCCCAGTATTCCCTA---------------------------------------------------------  344

Query  516  TTTGCCTCCTGTTCCCAGCCTGCCCAGTGACCCCCCAGAGCAC-TTCCCTCTGCGCAAGACAGTCTCTGAGCCC  588
                           |||||||||||.|||.|||||.||.||| |||||| ||||.||.|||||.|||||.|||
Sbjct  345  ---------------CAGCCTGCCCACTGAACCCCCGGAACACTTTCCCT-TGCGTAAAACAGTGTCTGAACCC  402

Query  589  AACCTGAAGCTGCGCTATAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAATCCACTGCTCCGAAAGGAGAGTGC  662
            |||||||||.|||||||.||.||||||||.|||||||||.|..|.||||||||.||||||.|.|||||||||||
Sbjct  403  AACCTGAAGTTGCGCTACAAACCCAAGAAATCCCTGGAGAGACGCAAGAATCCCCTGCTCAGGAAGGAGAGTGC  476

Query  663  GCCCCCCAGCCTCCGGCGGCGGCCCGCAGAGACCCTCGGAGACTCCTCCCCAAGTAGTAGCAGCACGCCCGCAT  736
            .||.||||||||.|||.||.||||.||.||||||||.|||||.||||||||.||||||||||||||.|||||.|
Sbjct  477  CCCGCCCAGCCTTCGGAGGAGGCCTGCCGAGACCCTTGGAGATTCCTCCCCCAGTAGTAGCAGCACACCCGCGT  550

Query  737  CAGGGTGCAGCTCCCCCAATGACAGCGAGCACGGCCCCAATCCCATCCTGGGCTCGGAGGCTGACAGTGACCGC  810
            ||||||||||||||||.||||||||||||||.|||||.||.||...|||.|||||.||||||||..||||||||
Sbjct  551  CAGGGTGCAGCTCCCCTAATGACAGCGAGCATGGCCCTAACCCTGCCCTAGGCTCAGAGGCTGATGGTGACCGC  624

Query  811  AGGACCCATCCGACTCTGGGCCCTCGGGGGCCAATCCTGGGGAGCCCCCACACTCCCCTCTTCCTGCCCCATGG  884
            |||||||||.|.|||.|.|||||||||||.||..|.|||||||.||||||..|||||||||||||||.|||.||
Sbjct  625  AGGACCCATTCAACTTTAGGCCCTCGGGGTCCTGTACTGGGGAACCCCCATGCTCCCCTCTTCCTGCACCACGG  698

Query  885  CTTGGAGCCCGAGGCTGGGGGCACCTTGCCCTCTCGCCTGCAGCCCATTCTCCTCCTGGACCCCTCAGGCTCTC  958
            ..|||||||.|||||||||||||||||.||||||||||||||.|||||||||||.|||||||||||||.|||||
Sbjct  699  TCTGGAGCCAGAGGCTGGGGGCACCTTACCCTCTCGCCTGCAACCCATTCTCCTGCTGGACCCCTCAGTCTCTC  772

Query  959  ATGCCCCGCTGCTGACTGTGCCCGGGCTTGGGCCCTTGCCCTTCCACTTTGCCCAGTCCTTAATGACCACCGAG  1032
            |||||||.|||..|||||||||.||.||||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct  773  ATGCCCCACTGTGGACTGTGCCTGGCCTTGGGCCCTTGCCCTTCCACTTTGCCCAGCCCTTACTGACCACCGAG  846

Query 1033  CGGCTCTCTGGGTCAGGCCTCCACTGGCCACTGAGCCGGACTCGCTCAGAGCCCCTGCCCCCCAGTGCCACCGC  1106
            |||||||||||||||||||||||..|.|||||.|.||||||.|||||||||||||||||||||||.|||||.||
Sbjct  847  CGGCTCTCTGGGTCAGGCCTCCATCGACCACTTAACCGGACCCGCTCAGAGCCCCTGCCCCCCAGCGCCACAGC  920

Query 1107  TCCCCCACCGCCGGGCCCCATGCAGCCCCGCCTGGAGCAGCTCAAAACTCACGTCCAGGTGATCA---------  1171
            ..||||.|.||.||.||||.||||||||||||.|||.|.|||||||.|||||||||||.||||||         
Sbjct  921  CTCCCCTCTGCTGGCCCCCCTGCAGCCCCGCCAGGATCGGCTCAAACCTCACGTCCAGCTGATCAAGCCAGCCA  994

Query 1172  ------------AGAGGTCAGCCAAGCCGAGTGAGAAGCCCCGGCTGCGGCAGATACCCTCGGCTGAAGACCTG  1233
                        |||||.|.||||||||.||||||||||||||.|||||.|||||||||||||||||.|||||.
Sbjct  995  TCTCCCCTCCCCAGAGGCCTGCCAAGCCCAGTGAGAAGCCCCGACTGCGACAGATACCCTCGGCTGAGGACCTA  1068

Query 1234  GAGACAGATGGCGGGGGACCGGGCCAGGTGGTGGACGATGGCCTGGAGCACAGGGAGCTGGGCCATGGGCAGCC  1307
            |||||||||||.||||||..|||.|...|||.|.|.|||||||||||.||.||||||...||||.|||||..||
Sbjct 1069  GAGACAGATGGTGGGGGAGTGGGACCTATGGCGAATGATGGCCTGGAACATAGGGAGTCAGGCCGTGGGCCTCC  1142

Query 1308  TGAGGCCAGAGGCCCCGCTCCTCTCCAGCAGCACCCTCAGGTGTTGCTCTGGGAACAGCAGCGACTGGCTGGGC  1381
            |||||.|||||||.||..|.||||.||||||||.|..||||||...|.||||||.|||||||..||.||.||||
Sbjct 1143  TGAGGGCAGAGGCTCCATTTCTCTGCAGCAGCATCAACAGGTGCCACCCTGGGAGCAGCAGCATCTAGCCGGGC  1216

Query 1382  GGCTCCCCCGGGGCAGCACCGGGGACACTGTGCTGCTTCCTCTGGCCCAGGGTGGGCACCGGCCTCTGTCCCGG  1455
            |||||.|.|.|||.|||.||||||||.|.||||||.|.|||||||||||||.|||.||||||||.||||||.|.
Sbjct 1217  GGCTCTCTCAGGGAAGCCCCGGGGACTCCGTGCTGATACCTCTGGCCCAGGTTGGACACCGGCCCCTGTCCAGA  1290

Query 1456  GCTCAGTCTTCCCCAGCCGCACCTGCCTCACTG-TCAGCCCCAGAGCCTGCCAGCCAGGCCCGAGTCCTCTCCA  1528
            .|.||||||||||||||.|||||||.|||.||| |.|| |||||||||..||.|.|||.|||.|||||||..||
Sbjct 1291  ACCCAGTCTTCCCCAGCAGCACCTGTCTCCCTGCTGAG-CCCAGAGCCCACCTGTCAGACCCAAGTCCTCAACA  1363

Query 1529  GCTCAGAGACCCCTGCCAGGACCCTGCCCTTCACCACAGGGCTGATCTATGACTCGGTCATGCTGAAGCACCAG  1602
            ||||||||||.||||                  |.|||||||||.|||||||||||||.||||||||.|||||.
Sbjct 1364  GCTCAGAGACACCTG------------------CTACAGGGCTGGTCTATGACTCGGTGATGCTGAAACACCAA  1419

Query 1603  TGCTCCTGCGGTGACAACAGCAGGCACCCGGAGCACGCCGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGA  1676
            ||.|||||.||.||||||||||.|||.||.|||||.||.|||||||||||||||||||||||||||||||||||
Sbjct 1420  TGTTCCTGTGGAGACAACAGCAAGCATCCCGAGCATGCAGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGA  1493

Query 1677  GCGGGGGCTCCGGAGCCAGTGTGAGTGTCTCCGAGGCCGGAAGGCCTCCCTGGAAGAGCTGCAGTCGGTCCACT  1750
            .|||||.|||||.||||||||||||||||||||||||||.|||||.|||||.||.|||||||||||.|||||||
Sbjct 1494  ACGGGGTCTCCGCAGCCAGTGTGAGTGTCTCCGAGGCCGAAAGGCTTCCCTAGAGGAGCTGCAGTCAGTCCACT  1567

Query 1751  CTGAGCGGCACGTGCTCCTCTACGGCACCAACCCGCTCAGCCGCCTCAAACTGGACAACGGGAAGCTGGCAGGG  1824
            ||||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.|||||||||||..||||.
Sbjct 1568  CTGAACGGCACGTGCTCCTCTACGGCACGAACCCACTCAGCCGCCTCAAACTGGATAACGGGAAGCTTACAGGA  1641

Query 1825  CTCCTGGCACAGCGGATGTTTGTGATGCTGCCCTGTGGTGGGGTTGGGGTGGACACTGACACCATCTGGAATGA  1898
            ||||||||||||||||.||||||||||||.||||||||.|||||||||||.||.|||||||||||||||||.||
Sbjct 1642  CTCCTGGCACAGCGGACGTTTGTGATGCTACCCTGTGGCGGGGTTGGGGTCGATACTGACACCATCTGGAACGA  1715

Query 1899  GCTTCATTCCTCCAATGCAGCCCGCTGGGCCGCTGGCAGTGTCACTGACCTCGCCTTCAAAGTGGCTTCTCGTG  1972
            |||.||||||||||||||||||||||||||.||.|||||||||||.|||||.|||||||||||.|||||.||.|
Sbjct 1716  GCTGCATTCCTCCAATGCAGCCCGCTGGGCTGCGGGCAGTGTCACCGACCTTGCCTTCAAAGTAGCTTCCCGAG  1789

Query 1973  AGCTAAAGAATGGTTTCGCTGTGGTGCGGCCCCCAGGACACCATGCAGATCATTCAACAGCCATGGGCTTCTGC  2046
            ||||.||||||||.||.|||||||||||.|||||.||||||||||||||||||||.||||||||||||||||||
Sbjct 1790  AGCTGAAGAATGGCTTTGCTGTGGTGCGACCCCCGGGACACCATGCAGATCATTCTACAGCCATGGGCTTCTGC  1863

Query 2047  TTCTTCAACTCAGTGGCCATCGCCTGCCGGCAGCTGCAACAGCAGAGCAAGGCCAGCAAGATCCTCATTGTAGA  2120
            |||||||||||.|||||||||||||||||.|||||.||.||.||..||||.||||||||||||||||||||.||
Sbjct 1864  TTCTTCAACTCCGTGGCCATCGCCTGCCGACAGCTACAGCAACACGGCAAAGCCAGCAAGATCCTCATTGTTGA  1937

Query 2121  CTGGGACGTGCACCATGGCAACGGCACCCAGCAAACCTTCTACCAAGACCCCAGTGTGCTCTACATCTCCCTGC  2194
            ||||||.||.|||||||||||||||||.|||||.||.||||||||.||||||||||||||||||||.|||||.|
Sbjct 1938  CTGGGATGTTCACCATGGCAACGGCACACAGCAGACTTTCTACCAGGACCCCAGTGTGCTCTACATTTCCCTTC  2011

Query 2195  ATCGCCATGACGACGGCAACTTCTTCCCGGGGAGTGGGGCTGTGGATGAGGTAGGGGCTGGCAGCGGTGAGGGC  2268
            ||||||||||||||||||||||||||||.||.||||||||.|||||||||||.||..|||||||.||.||||||
Sbjct 2012  ATCGCCATGACGACGGCAACTTCTTCCCAGGCAGTGGGGCCGTGGATGAGGTGGGAACTGGCAGTGGCGAGGGC  2085

Query 2269  TTCAATGTCAATGTGGCCTGGGCTGGAGGTCTGGACCCCCCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAG  2342
            |||||||||||.|||||.||||||||.||..||||.||.|||||||||||||||||||||||||||||||||||
Sbjct 2086  TTCAATGTCAACGTGGCTTGGGCTGGGGGCTTGGATCCACCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAG  2159

Query 2343  GATAGTCGTGATGCCCATCGCCCGAGAGTTCTCTCCAGACCTAGTCCTGGTGTCTGCTGGATTTGATGCTGCTG  2416
            ||||||.|||||||||||.|||||||||||..||||||||||.|||||||||||||||||.|||||||||||.|
Sbjct 2160  GATAGTGGTGATGCCCATTGCCCGAGAGTTTGCTCCAGACCTGGTCCTGGTGTCTGCTGGGTTTGATGCTGCGG  2233

Query 2417  AGGGTCACCCGGCCCCACTGGGTGGCTACCATGTTTCTGCCAAATGTTTTGGATACATGACGCAGCAACTGATG  2490
            ||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||||||||||||..|||||
Sbjct 2234  AGGGTCACCCAGCCCCGCTGGGTGGCTACCATGTTTCTGCCAAATGTTTTGGGTACATGACGCAGCAGTTGATG  2307

Query 2491  AACCTGGCAGGAGGCGCAGTGGTGCTGGCCTTGGAGGGTGGCCATGACCTCACAGCCATCTGTGACGCCTCTGA  2564
            |||.|||||||||||||.||||||.|||||||.||||||||.|||||||||||.|||||||||||.|||||.||
Sbjct 2308  AACTTGGCAGGAGGCGCCGTGGTGTTGGCCTTAGAGGGTGGACATGACCTCACGGCCATCTGTGATGCCTCGGA  2381

Query 2565  GGCCTGTGTGGCTGCTCTTCTGGGTAACAGGGTGGATCCCCTTTCAGAAGAAGGCTGGAAACAGAAACCCAACC  2638
            |||||||||.||||||||||||||.||||.||||||.|||||||||||||||.|||||||||||||||||||||
Sbjct 2382  GGCCTGTGTAGCTGCTCTTCTGGGCAACAAGGTGGACCCCCTTTCAGAAGAAAGCTGGAAACAGAAACCCAACC  2455

Query 2639  TCAATGCCATCCGCTCTCTGGAGGCCGTGATCCGGGTGCACAGTAAATACTGGGGCTGCATGCAGCGCCTGGCC  2712
            |||.||||||||||||.|||||.||.|||.||.||||||||||.||||||||||||||||||||||||.|||||
Sbjct 2456  TCAGTGCCATCCGCTCGCTGGAAGCTGTGGTCAGGGTGCACAGGAAATACTGGGGCTGCATGCAGCGCTTGGCC  2529

Query 2713  TCCTGTCCAGACTCCTGGGTGCCTAGAGTGCCAGGGGCTGACAAAGAAGAAGTGGAGGCAGTGACCGCACTGGC  2786
            ||||||||||||||||||.|.||.||||||||.||.||||   |.|.|||||||||.||.||||||||.|||||
Sbjct 2530  TCCTGTCCAGACTCCTGGCTACCCAGAGTGCCGGGAGCTG---ATGCAGAAGTGGAAGCCGTGACCGCGCTGGC  2600

Query 2787  GTCCCTCTCTGTGGGCATCCTGGCTGAAGATAGGCCCTCGGAGCAGCTGGTGGAGGAGGAAGAACCTATGAATC  2860
            .|||||.|||||||||||||||||||||||.|||||||||||||.|||||||||.|||||||||||.|||||.|
Sbjct 2601  ATCCCTTTCTGTGGGCATCCTGGCTGAAGACAGGCCCTCGGAGCGGCTGGTGGAAGAGGAAGAACCCATGAACC  2674

Query 2861  TC  2862
            ||
Sbjct 2675  TC  2676

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