Nucleotide Global Alignment

Description

Query:
TRCN0000488732
Subject:
NM_001204281.1
Aligned Length:
2867
Identities:
2232
Gaps:
319

Alignment

Query    1  ATGCACAGCCCCGGCGCTGATGGGACCCAGGTGAGCCCGGGTGCCCACTACTGCAGCCCCACTGGCGCAGGCTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCCAGGCCCTGTGCAGACACACCAGGCCCTCAGCCGCAGCCCATGGACCTGCGGGTGGGCCAGCGGCCCCCAG  148
                                                       |||||||||||||||||||||||||||.|.|
Sbjct    1  -------------------------------------------ATGGACCTGCGGGTGGGCCAGCGGCCCACGG  31

Query  149  TGGAGCCCCCACCAGAGCCCACATTGCTGGCCCTGCAGCGTCCCCAGCGCCTGCACCACCACCTCTTCCTAGCA  222
            |||||||||||||||||||..|..|||||.|||||||.|..|||||.||||||||||.|||.||||||||.|||
Sbjct   32  TGGAGCCCCCACCAGAGCCTGCGCTGCTGACCCTGCAACACCCCCAACGCCTGCACCGCCATCTCTTCCTGGCA  105

Query  223  GGC---CTGCAGCAGCAGCGCTCGGTGGAGCCCATGAGGCTCTCCATGGACACGCCGATGCCCGAGTTGCAGGT  293
            |||   |..|||||.||||||||.|..||||||||||||||||||||||||.|.||.|||||.|||.||||||.
Sbjct  106  GGCTTACACCAGCAACAGCGCTCAGCCGAGCCCATGAGGCTCTCCATGGACCCACCAATGCCGGAGCTGCAGGG  179

Query  294  GGGACCCCAGGAACAAGAGCTGCGGCAGCTTCTCCACAAGGACAAGAGCAAGCGAAGTGCTGTAGCCAGCAGCG  367
            |||||..|||||.|||||.||.|||||.||||||.|.||.||||||||||||||||||||.|||||||||||.|
Sbjct  180  GGGACAGCAGGAGCAAGAACTTCGGCAACTTCTCAATAAAGACAAGAGCAAGCGAAGTGCCGTAGCCAGCAGTG  253

Query  368  TGGTCAAGCAGAAGCTAGCGGAGGTGATTCTGAAAAAACAGCAGGCGGCCCTAGAAAGAACAGTCCATCCCAAC  441
            ||||||||||||||||.||.||.|||||.|||||.|||||||||||.|||||.||.||||||||||||||||.|
Sbjct  254  TGGTCAAGCAGAAGCTGGCTGAAGTGATCCTGAAGAAACAGCAGGCAGCCCTTGAGAGAACAGTCCATCCCAGC  327

Query  442  AGCCCCGGCATTCCCTACAGAACCCTGGAGCCCCTGGAGACGGAAGGAGCCACCCGCTCCATGCTCAGCAGCTT  515
            ||||||.|.||||||||||||||.||.||||||.||||.||.||.||.||..||||||||.||||.||||||||
Sbjct  328  AGCCCCAGTATTCCCTACAGAACTCTTGAGCCCTTGGACACAGAGGGTGCTGCCCGCTCCGTGCTTAGCAGCTT  401

Query  516  TTTGCCTCCTGTTCCCAGCCTGCCCAGTGACCCCCCAGAGCAC-TTCCCTCTGCGCAAGACAGTCTCTGAGCCC  588
            ..||||||||||||||||||||||||.|||.|||||.||.||| |||||| ||||.||.|||||.|||||.|||
Sbjct  402  CCTGCCTCCTGTTCCCAGCCTGCCCACTGAACCCCCGGAACACTTTCCCT-TGCGTAAAACAGTGTCTGAACCC  474

Query  589  AACCTGAAGCTGCGCTATAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAATCCACTGCTCCGAAAGGAGAGTGC  662
            |||||||||.|||||||.||.||||||||.|||||||||.|..|.||||||||.||||||.|.|||||||||||
Sbjct  475  AACCTGAAGTTGCGCTACAAACCCAAGAAATCCCTGGAGAGACGCAAGAATCCCCTGCTCAGGAAGGAGAGTGC  548

Query  663  GCCCCCCAGCCTCCGGCGGCGGCCCGCAGAGACCCTCGGAGACTCCTCCCCAAGTAGTAGCAGCACGCCCGCAT  736
            .||.||||||||.|||.||.||||.||.||||||||.|||||.||||||||.||||||||||||||.|||||.|
Sbjct  549  CCCGCCCAGCCTTCGGAGGAGGCCTGCCGAGACCCTTGGAGATTCCTCCCCCAGTAGTAGCAGCACACCCGCGT  622

Query  737  CAGGGTGCAGCTCCCCCAATGACAGCGAGCACGGCCCCAATCCCATCCTGGGCTCGGAGGCTGACAGTGACCGC  810
            ||||||||||||||||.||||||||||||||.|||||.||.||...|||.|||||.||||||||..||||||||
Sbjct  623  CAGGGTGCAGCTCCCCTAATGACAGCGAGCATGGCCCTAACCCTGCCCTAGGCTCAGAGGCTGATGGTGACCGC  696

Query  811  AGGACCCATCCGACTCTGGGCCCTCGGGGGCCAATCCTGGGGAGCCCCCACACTCCCCTCTTCCTGCCCCATGG  884
            |||||||||.|.|||.|.|||||||||||.||..|.|||||||.||||||..|||||||||||||||.|||.||
Sbjct  697  AGGACCCATTCAACTTTAGGCCCTCGGGGTCCTGTACTGGGGAACCCCCATGCTCCCCTCTTCCTGCACCACGG  770

Query  885  CTTGGAGCCCGAGGCTGGGGGCACCTTGCCCTCTCGCCTGCAGCCCATTCTCCTCCTGGACCCCTCAGGCTCTC  958
            ..|||||||.|||||||||||||||||.||||||||||||||.|||||||||||.|||||||||||||.|||||
Sbjct  771  TCTGGAGCCAGAGGCTGGGGGCACCTTACCCTCTCGCCTGCAACCCATTCTCCTGCTGGACCCCTCAGTCTCTC  844

Query  959  ATGCCCCGCTGCTGACTGTGCCCGGGCTTGGGCCCTTGCCCTTCCACTTTGCCCAGTCCTTAATGACCACCGAG  1032
            |||||||.|||..|||||||||.||.||||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct  845  ATGCCCCACTGTGGACTGTGCCTGGCCTTGGGCCCTTGCCCTTCCACTTTGCCCAGCCCTTACTGACCACCGAG  918

Query 1033  CGGCTCTCTGGGTCAGGCCTCCACTGGCCACTGAGCCGGACTCGCTCAGAGCCCCTGCCCCCCAGTGCCACCGC  1106
            |||||||||||||||||||||||..|.|||||.|.||||||.|||||||||||||||||||||||.|||||.||
Sbjct  919  CGGCTCTCTGGGTCAGGCCTCCATCGACCACTTAACCGGACCCGCTCAGAGCCCCTGCCCCCCAGCGCCACAGC  992

Query 1107  TCCCCCACCGCCGGGCCCCATGCAGCCCCGCCTGGAGCAGCTCAAAACTCACGTCCAGGTGATCAAGAGGTCAG  1180
            ..||||.|.||.||.||||.||||||||||||.|||.|.|||||||.|||||||||||.||||||||       
Sbjct  993  CTCCCCTCTGCTGGCCCCCCTGCAGCCCCGCCAGGATCGGCTCAAACCTCACGTCCAGCTGATCAAG-------  1059

Query 1181  CCAAGCCGAGTGAGAAGCCCCGGCTGCGGCAGATACCCTCGGCTGAAGACCTGGAGACAGATGGCGGGGGACCG  1254
                                                                                     |
Sbjct 1060  -------------------------------------------------------------------------G  1060

Query 1255  GGCCAGGTGGTGGACGATGGCCTGGAGCACAGGGAGCTGGGCCATGGGCAGCCTGAGGCCAGAGGCCCCGCTCC  1328
            .||||                                                                     
Sbjct 1061  TGCCA---------------------------------------------------------------------  1065

Query 1329  TCTCCAGCAGCACCCTCAGGTGTTGCTCTGGGAACAGCAGCGACTGGCTGGGCGGCTCCCCCGGGGCAGCACCG  1402
                                     |.||||||.|||||||..||.||.|||||||||.|.|.|||.|||.|||
Sbjct 1066  -------------------------CCCTGGGAGCAGCAGCATCTAGCCGGGCGGCTCTCTCAGGGAAGCCCCG  1114

Query 1403  GGGACACTGTGCTGCTTCCTCTGGCCCAGGGTGGGCACCGGCCTCTGTCCCGGGCTCAGTCTTCCCCAGCCGCA  1476
            |||||.|.||||||.|.|||||||||||||.|||.||||||||.||||||.|..|.||||||||||||||.|||
Sbjct 1115  GGGACTCCGTGCTGATACCTCTGGCCCAGGTTGGACACCGGCCCCTGTCCAGAACCCAGTCTTCCCCAGCAGCA  1188

Query 1477  CCTGCCTCACTG-TCAGCCCCAGAGCCTGCCAGCCAGGCCCGAGTCCTCTCCAGCTCAGAGACCCCTGCCAGGA  1549
            ||||.|||.||| |.|| |||||||||..||.|.|||.|||.|||||||..||||||||||||.||||      
Sbjct 1189  CCTGTCTCCCTGCTGAG-CCCAGAGCCCACCTGTCAGACCCAAGTCCTCAACAGCTCAGAGACACCTG------  1255

Query 1550  CCCTGCCCTTCACCACAGGGCTGATCTATGACTCGGTCATGCTGAAGCACCAGTGCTCCTGCGGTGACAACAGC  1623
                        |.|||||||||.|||||||||||||.||||||||.|||||.||.|||||.||.|||||||||
Sbjct 1256  ------------CTACAGGGCTGGTCTATGACTCGGTGATGCTGAAACACCAATGTTCCTGTGGAGACAACAGC  1317

Query 1624  AGGCACCCGGAGCACGCCGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAGCGGGGGCTCCGGAGCCAGTG  1697
            |.|||.||.|||||.||.|||||||||||||||||||||||||||||||||||.|||||.|||||.||||||||
Sbjct 1318  AAGCATCCCGAGCATGCAGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAACGGGGTCTCCGCAGCCAGTG  1391

Query 1698  TGAGTGTCTCCGAGGCCGGAAGGCCTCCCTGGAAGAGCTGCAGTCGGTCCACTCTGAGCGGCACGTGCTCCTCT  1771
            ||||||||||||||||||.|||||.|||||.||.|||||||||||.|||||||||||.||||||||||||||||
Sbjct 1392  TGAGTGTCTCCGAGGCCGAAAGGCTTCCCTAGAGGAGCTGCAGTCAGTCCACTCTGAACGGCACGTGCTCCTCT  1465

Query 1772  ACGGCACCAACCCGCTCAGCCGCCTCAAACTGGACAACGGGAAGCTGGCAGGGCTCCTGGCACAGCGGATGTTT  1845
            |||||||.|||||.||||||||||||||||||||.|||||||||||..||||.||||||||||||||||.||||
Sbjct 1466  ACGGCACGAACCCACTCAGCCGCCTCAAACTGGATAACGGGAAGCTTACAGGACTCCTGGCACAGCGGACGTTT  1539

Query 1846  GTGATGCTGCCCTGTGGTGGGGTTGGGGTGGACACTGACACCATCTGGAATGAGCTTCATTCCTCCAATGCAGC  1919
            ||||||||.||||||||.|||||||||||.||.|||||||||||||||||.|||||.|||||||||||||||||
Sbjct 1540  GTGATGCTACCCTGTGGCGGGGTTGGGGTCGATACTGACACCATCTGGAACGAGCTGCATTCCTCCAATGCAGC  1613

Query 1920  CCGCTGGGCCGCTGGCAGTGTCACTGACCTCGCCTTCAAAGTGGCTTCTCGTGAGCTAAAGAATGGTTTCGCTG  1993
            |||||||||.||.|||||||||||.|||||.|||||||||||.|||||.||.|||||.||||||||.||.||||
Sbjct 1614  CCGCTGGGCTGCGGGCAGTGTCACCGACCTTGCCTTCAAAGTAGCTTCCCGAGAGCTGAAGAATGGCTTTGCTG  1687

Query 1994  TGGTGCGGCCCCCAGGACACCATGCAGATCATTCAACAGCCATGGGCTTCTGCTTCTTCAACTCAGTGGCCATC  2067
            |||||||.|||||.||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||
Sbjct 1688  TGGTGCGACCCCCGGGACACCATGCAGATCATTCTACAGCCATGGGCTTCTGCTTCTTCAACTCCGTGGCCATC  1761

Query 2068  GCCTGCCGGCAGCTGCAACAGCAGAGCAAGGCCAGCAAGATCCTCATTGTAGACTGGGACGTGCACCATGGCAA  2141
            ||||||||.|||||.||.||.||..||||.||||||||||||||||||||.||||||||.||.|||||||||||
Sbjct 1762  GCCTGCCGACAGCTACAGCAACACGGCAAAGCCAGCAAGATCCTCATTGTTGACTGGGATGTTCACCATGGCAA  1835

Query 2142  CGGCACCCAGCAAACCTTCTACCAAGACCCCAGTGTGCTCTACATCTCCCTGCATCGCCATGACGACGGCAACT  2215
            ||||||.|||||.||.||||||||.||||||||||||||||||||.|||||.||||||||||||||||||||||
Sbjct 1836  CGGCACACAGCAGACTTTCTACCAGGACCCCAGTGTGCTCTACATTTCCCTTCATCGCCATGACGACGGCAACT  1909

Query 2216  TCTTCCCGGGGAGTGGGGCTGTGGATGAGGTAGGGGCTGGCAGCGGTGAGGGCTTCAATGTCAATGTGGCCTGG  2289
            |||||||.||.||||||||.|||||||||||.||..|||||||.||.|||||||||||||||||.|||||.|||
Sbjct 1910  TCTTCCCAGGCAGTGGGGCCGTGGATGAGGTGGGAACTGGCAGTGGCGAGGGCTTCAATGTCAACGTGGCTTGG  1983

Query 2290  GCTGGAGGTCTGGACCCCCCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAGGATAGTCGTGATGCCCATCGC  2363
            |||||.||..||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||.||
Sbjct 1984  GCTGGGGGCTTGGATCCACCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAGGATAGTGGTGATGCCCATTGC  2057

Query 2364  CCGAGAGTTCTCTCCAGACCTAGTCCTGGTGTCTGCTGGATTTGATGCTGCTGAGGGTCACCCGGCCCCACTGG  2437
            |||||||||..||||||||||.|||||||||||||||||.|||||||||||.|||||||||||.|||||.||||
Sbjct 2058  CCGAGAGTTTGCTCCAGACCTGGTCCTGGTGTCTGCTGGGTTTGATGCTGCGGAGGGTCACCCAGCCCCGCTGG  2131

Query 2438  GTGGCTACCATGTTTCTGCCAAATGTTTTGGATACATGACGCAGCAACTGATGAACCTGGCAGGAGGCGCAGTG  2511
            |||||||||||||||||||||||||||||||.||||||||||||||..||||||||.|||||||||||||.|||
Sbjct 2132  GTGGCTACCATGTTTCTGCCAAATGTTTTGGGTACATGACGCAGCAGTTGATGAACTTGGCAGGAGGCGCCGTG  2205

Query 2512  GTGCTGGCCTTGGAGGGTGGCCATGACCTCACAGCCATCTGTGACGCCTCTGAGGCCTGTGTGGCTGCTCTTCT  2585
            |||.|||||||.||||||||.|||||||||||.|||||||||||.|||||.|||||||||||.|||||||||||
Sbjct 2206  GTGTTGGCCTTAGAGGGTGGACATGACCTCACGGCCATCTGTGATGCCTCGGAGGCCTGTGTAGCTGCTCTTCT  2279

Query 2586  GGGTAACAGGGTGGATCCCCTTTCAGAAGAAGGCTGGAAACAGAAACCCAACCTCAATGCCATCCGCTCTCTGG  2659
            |||.||||.||||||.|||||||||||||||.||||||||||||||||||||||||.||||||||||||.||||
Sbjct 2280  GGGCAACAAGGTGGACCCCCTTTCAGAAGAAAGCTGGAAACAGAAACCCAACCTCAGTGCCATCCGCTCGCTGG  2353

Query 2660  AGGCCGTGATCCGGGTGCACAGTAAATACTGGGGCTGCATGCAGCGCCTGGCCTCCTGTCCAGACTCCTGGGTG  2733
            |.||.|||.||.||||||||||.||||||||||||||||||||||||.|||||||||||||||||||||||.|.
Sbjct 2354  AAGCTGTGGTCAGGGTGCACAGGAAATACTGGGGCTGCATGCAGCGCTTGGCCTCCTGTCCAGACTCCTGGCTA  2427

Query 2734  CCTAGAGTGCCAGGGGCTGACAAAGAAGAAGTGGAGGCAGTGACCGCACTGGCGTCCCTCTCTGTGGGCATCCT  2807
            ||.||||||||.||.||||   |.|.|||||||||.||.||||||||.|||||.|||||.||||||||||||||
Sbjct 2428  CCCAGAGTGCCGGGAGCTG---ATGCAGAAGTGGAAGCCGTGACCGCGCTGGCATCCCTTTCTGTGGGCATCCT  2498

Query 2808  GGCTGAAGATAGGCCCTCGGAGCAGCTGGTGGAGGAGGAAGAACCTATGAATCTC  2862
            |||||||||.|||||||||||||.|||||||||.|||||||||||.|||||.|||
Sbjct 2499  GGCTGAAGACAGGCCCTCGGAGCGGCTGGTGGAAGAGGAAGAACCCATGAACCTC  2553

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