Nucleotide Global Alignment

Description

Query:
TRCN0000488732
Subject:
XM_011245699.1
Aligned Length:
2867
Identities:
2370
Gaps:
145

Alignment

Query    1  ATGCACAGCCCCGGCGCTGATGGGACCCAGGTGAGCCCGGGTGCCCACTACTGCAGCCCCACTGGCGCAGGCTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCCAGGCCCTGTGCAGACACACCAGGCCCTCAGCCGCAGCCCATGGACCTGCGGGTGGGCCAGCGGCCCCCAG  148
                                                       |||||||||||||||||||||||||||.|.|
Sbjct    1  -------------------------------------------ATGGACCTGCGGGTGGGCCAGCGGCCCACGG  31

Query  149  TGGAGCCCCCACCAGAGCCCACATTGCTGGCCCTGCAGCGTCCCCAGCGCCTGCACCACCACCTCTTCCTAGCA  222
            |||||||||||||||||||..|..|||||.|||||||.|..|||||.||||||||||.|||.||||||||.|||
Sbjct   32  TGGAGCCCCCACCAGAGCCTGCGCTGCTGACCCTGCAACACCCCCAACGCCTGCACCGCCATCTCTTCCTGGCA  105

Query  223  GGC---CTGCAGCAGCAGCGCTCGGTGGAGCCCATGAGGCTCTCCATGGACACGCCGATGCCCGAGTTGCAGGT  293
            |||   |..|||||.||||||||.|..||||||||||||||||||||||||.|.||.|||||.|||.||||||.
Sbjct  106  GGCTTACACCAGCAACAGCGCTCAGCCGAGCCCATGAGGCTCTCCATGGACCCACCAATGCCGGAGCTGCAGGG  179

Query  294  GGGACCCCAGGAACAAGAGCTGCGGCAGCTTCTCCACAAGGACAAGAGCAAGCGAAGTGCTGTAGCCAGCAGCG  367
            |||||..|||||.|||||.||.|||||.||||||.|.||.||||||||||||||||||||.|||||||||||.|
Sbjct  180  GGGACAGCAGGAGCAAGAACTTCGGCAACTTCTCAATAAAGACAAGAGCAAGCGAAGTGCCGTAGCCAGCAGTG  253

Query  368  TGGTCAAGCAGAAGCTAGCGGAGGTGATTCTGAAAAAACAGCAGGCGGCCCTAGAAAGAACAGTCCATCCCAAC  441
            ||||||||||||||||.||.||.|||||.|||||.|||||||||||.|||||.||.||||||||||||||||.|
Sbjct  254  TGGTCAAGCAGAAGCTGGCTGAAGTGATCCTGAAGAAACAGCAGGCAGCCCTTGAGAGAACAGTCCATCCCAGC  327

Query  442  AGCCCCGGCATTCCCTACAGAACCCTGGAGCCCCTGGAGACGGAAGGAGCCACCCGCTCCATGCTCAGCAGCTT  515
            ||||||.|.||||||||||||||.||.||||||.||||.||.||.||.||..||||||||.||||.||||||||
Sbjct  328  AGCCCCAGTATTCCCTACAGAACTCTTGAGCCCTTGGACACAGAGGGTGCTGCCCGCTCCGTGCTTAGCAGCTT  401

Query  516  TTTGCCTCCTGTTCCCAGCCTGCCCAGTGACCCCCCAGAGCAC-TTCCCTCTGCGCAAGACAGTCTCTGAGCCC  588
            ..||||||||||||||||||||||||.|||.|||||.||.||| |||||| ||||.||.|||||.|||||.|||
Sbjct  402  CCTGCCTCCTGTTCCCAGCCTGCCCACTGAACCCCCGGAACACTTTCCCT-TGCGTAAAACAGTGTCTGAACCC  474

Query  589  AACCTGAAGCTGCGCTATAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAATCCACTGCTCCGAAAGGAGAGTGC  662
            |||||||||.|||||||.||.||||||||.|||||||||.|..|.||||||||.||||||.|.|||||||||||
Sbjct  475  AACCTGAAGTTGCGCTACAAACCCAAGAAATCCCTGGAGAGACGCAAGAATCCCCTGCTCAGGAAGGAGAGTGC  548

Query  663  GCCCCCCAGCCTCCGGCGGCGGCCCGCAGAGACCCTCGGAGACTCCTCCCCAAGTAGTAGCAGCACGCCCGCAT  736
            .||.||||||||.|||.||.||||.||.||||||||.|||||.||||||||.||||||||||||||.|||||.|
Sbjct  549  CCCGCCCAGCCTTCGGAGGAGGCCTGCCGAGACCCTTGGAGATTCCTCCCCCAGTAGTAGCAGCACACCCGCGT  622

Query  737  CAGGGTGCAGCTCCCCCAATGACAGCGAGCACGGCCCCAATCCCATCCTGGGCTCGGAGGCTGACAGTGACCGC  810
            ||||||||||||||||.||||||||||||||.|||||.||.||...|||.|||||.||||||||..||||||||
Sbjct  623  CAGGGTGCAGCTCCCCTAATGACAGCGAGCATGGCCCTAACCCTGCCCTAGGCTCAGAGGCTGATGGTGACCGC  696

Query  811  AGGACCCATCCGACTCTGGGCCCTCGGGGGCCAATCCTGGGGAGCCCCCACACTCCCCTCTTCCTGCCCCATGG  884
            |||||||||.|.|||.|.|||||||||||.||..|.|||||||.||||||..|||||||||||||||.|||.||
Sbjct  697  AGGACCCATTCAACTTTAGGCCCTCGGGGTCCTGTACTGGGGAACCCCCATGCTCCCCTCTTCCTGCACCACGG  770

Query  885  CTTGGAGCCCGAGGCTGGGGGCACCTTGCCCTCTCGCCTGCAGCCCATTCTCCTCCTGGACCCCTCAGGCTCTC  958
            ..|||||||.|||||||||||||||||.||||||||||||||.|||||||||||.|||||||||||||.|||||
Sbjct  771  TCTGGAGCCAGAGGCTGGGGGCACCTTACCCTCTCGCCTGCAACCCATTCTCCTGCTGGACCCCTCAGTCTCTC  844

Query  959  ATGCCCCGCTGCTGACTGTGCCCGGGCTTGGGCCCTTGCCCTTCCACTTTGCCCAGTCCTTAATGACCACCGAG  1032
            |||||||.|||..|||||||||.||.||||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct  845  ATGCCCCACTGTGGACTGTGCCTGGCCTTGGGCCCTTGCCCTTCCACTTTGCCCAGCCCTTACTGACCACCGAG  918

Query 1033  CGGCTCTCTGGGTCAGGCCTCCACTGGCCACTGAGCCGGACTCGCTCAGAGCCCCTGCCCCCCAGTGCCACCGC  1106
            |||||||||||||||||||||||..|.|||||.|.||||||.|||||||||||||||||||||||.|||||.||
Sbjct  919  CGGCTCTCTGGGTCAGGCCTCCATCGACCACTTAACCGGACCCGCTCAGAGCCCCTGCCCCCCAGCGCCACAGC  992

Query 1107  TCCCCCACCGCCGGGCCCCATGCAGCCCCGCCTGGAGCAGCTCAAAACTCACGTCCAGGTGATCAAGAGGTCAG  1180
            ..||||.|.||.||.||||.||||||||||||.|||.|.|||||||.|||||||||||.|||||||||||.|.|
Sbjct  993  CTCCCCTCTGCTGGCCCCCCTGCAGCCCCGCCAGGATCGGCTCAAACCTCACGTCCAGCTGATCAAGAGGCCTG  1066

Query 1181  CCAAGCCGAGTGAGAAGCCCCGGCTGCGGCAGATACCCTCGGCTGAAGACCTGGAGACAGATGGCGGGGGACCG  1254
            |||||||.||||||||||||||.|||||.|||||||||||||||||.|||||.|||||||||||.||||||..|
Sbjct 1067  CCAAGCCCAGTGAGAAGCCCCGACTGCGACAGATACCCTCGGCTGAGGACCTAGAGACAGATGGTGGGGGAGTG  1140

Query 1255  GGCCAGGTGGTGGACGATGGCCTGGAGCACAGGGAGCTGGGCCATGGGCAGCCTGAGGCCAGAGGCCCCGCTCC  1328
            ||.|...|||.|.|.|||||||||||.||.||||||...||||.|||||..|||||||.|||||||.||..|.|
Sbjct 1141  GGACCTATGGCGAATGATGGCCTGGAACATAGGGAGTCAGGCCGTGGGCCTCCTGAGGGCAGAGGCTCCATTTC  1214

Query 1329  TCTCCAGCAGCACCCTCAGGTGTTGCTCTGGGAACAGCAGCGACTGGCTGGGCGGCTCCCCCGGGGCAGCACCG  1402
            |||.||||||||.|..||||||...|.||||||.|||||||..||.||.|||||||||.|.|.|||.|||.|||
Sbjct 1215  TCTGCAGCAGCATCAACAGGTGCCACCCTGGGAGCAGCAGCATCTAGCCGGGCGGCTCTCTCAGGGAAGCCCCG  1288

Query 1403  GGGACACTGTGCTGCTTCCTCTGGCCCAGGGTGGGCACCGGCCTCTGTCCCGGGCTCAGTCTTCCCCAGCCGCA  1476
            |||||.|.||||||.|.|||||||||||||.|||.||||||||.||||||.|..|.||||||||||||||.|||
Sbjct 1289  GGGACTCCGTGCTGATACCTCTGGCCCAGGTTGGACACCGGCCCCTGTCCAGAACCCAGTCTTCCCCAGCAGCA  1362

Query 1477  CCTGCCTCACTG-TCAGCCCCAGAGCCTGCCAGCCAGGCCCGAGTCCTCTCCAGCTCAGAGACCCCTGCCAGGA  1549
            ||||.|||.||| |.|| |||||||||..||.|.|||.|||.|||||||..||||||||||||.||||      
Sbjct 1363  CCTGTCTCCCTGCTGAG-CCCAGAGCCCACCTGTCAGACCCAAGTCCTCAACAGCTCAGAGACACCTG------  1429

Query 1550  CCCTGCCCTTCACCACAGGGCTGATCTATGACTCGGTCATGCTGAAGCACCAGTGCTCCTGCGGTGACAACAGC  1623
                        |.|||||||||.|||||||||||||.||||||||.|||||.||.|||||.||.|||||||||
Sbjct 1430  ------------CTACAGGGCTGGTCTATGACTCGGTGATGCTGAAACACCAATGTTCCTGTGGAGACAACAGC  1491

Query 1624  AGGCACCCGGAGCACGCCGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAGCGGGGGCTCCGGAGCCAGTG  1697
            |.|||.||.|||||.||.|||||||||||||||||||||||||||||||||||.|||||.|||||.||||||||
Sbjct 1492  AAGCATCCCGAGCATGCAGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAACGGGGTCTCCGCAGCCAGTG  1565

Query 1698  TGAGTGTCTCCGAGGCCGGAAGGCCTCCCTGGAAGAGCTGCAGTCGGTCCACTCTGAGCGGCACGTGCTCCTCT  1771
            ||||||||||||||||||.|||||.|||||.||.|||||||||||.|||||||||||.||||||||||||||||
Sbjct 1566  TGAGTGTCTCCGAGGCCGAAAGGCTTCCCTAGAGGAGCTGCAGTCAGTCCACTCTGAACGGCACGTGCTCCTCT  1639

Query 1772  ACGGCACCAACCCGCTCAGCCGCCTCAAACTGGACAACGGGAAGCTGGCAGGGCTCCTGGCACAGCGGATGTTT  1845
            |||||||.|||||.||||||||||||||||||||.|||||||||||..||||.||||||||||||||||.||||
Sbjct 1640  ACGGCACGAACCCACTCAGCCGCCTCAAACTGGATAACGGGAAGCTTACAGGACTCCTGGCACAGCGGACGTTT  1713

Query 1846  GTGATGCTGCCCTGTGGTGGGGTTGGGGTGGACACTGACACCATCTGGAATGAGCTTCATTCCTCCAATGCAGC  1919
            ||||||||.||||||||.|||||||||||.||.|||||||||||||||||.|||||.|||||||||||||||||
Sbjct 1714  GTGATGCTACCCTGTGGCGGGGTTGGGGTCGATACTGACACCATCTGGAACGAGCTGCATTCCTCCAATGCAGC  1787

Query 1920  CCGCTGGGCCGCTGGCAGTGTCACTGACCTCGCCTTCAAAGTGGCTTCTCGTGAGCTAAAGAATGGTTTCGCTG  1993
            |||||||||.||.|||||||||||.|||||.|||||||||||.|||||.||.|||||.||||||||.||.||||
Sbjct 1788  CCGCTGGGCTGCGGGCAGTGTCACCGACCTTGCCTTCAAAGTAGCTTCCCGAGAGCTGAAGAATGGCTTTGCTG  1861

Query 1994  TGGTGCGGCCCCCAGGACACCATGCAGATCATTCAACAGCCATGGGCTTCTGCTTCTTCAACTCAGTGGCCATC  2067
            |||||||.|||||.||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||
Sbjct 1862  TGGTGCGACCCCCGGGACACCATGCAGATCATTCTACAGCCATGGGCTTCTGCTTCTTCAACTCCGTGGCCATC  1935

Query 2068  GCCTGCCGGCAGCTGCAACAGCAGAGCAAGGCCAGCAAGATCCTCATTGTAGACTGGGACGTGCACCATGGCAA  2141
            ||||||||.|||||.||.||.||..||||.||||||||||||||||||||.||||||||.||.|||||||||||
Sbjct 1936  GCCTGCCGACAGCTACAGCAACACGGCAAAGCCAGCAAGATCCTCATTGTTGACTGGGATGTTCACCATGGCAA  2009

Query 2142  CGGCACCCAGCAAACCTTCTACCAAGACCCCAGTGTGCTCTACATCTCCCTGCATCGCCATGACGACGGCAACT  2215
            ||||||.|||||.||.||||||||.||||||||||||||||||||.|||||.||||||||||||||||||||||
Sbjct 2010  CGGCACACAGCAGACTTTCTACCAGGACCCCAGTGTGCTCTACATTTCCCTTCATCGCCATGACGACGGCAACT  2083

Query 2216  TCTTCCCGGGGAGTGGGGCTGTGGATGAGGTAGGGGCTGGCAGCGGTGAGGGCTTCAATGTCAATGTGGCCTGG  2289
            |||||||.||.||||||||.|||||||||||.||..|||||||.||.|||||||||||||||||.|||||.|||
Sbjct 2084  TCTTCCCAGGCAGTGGGGCCGTGGATGAGGTGGGAACTGGCAGTGGCGAGGGCTTCAATGTCAACGTGGCTTGG  2157

Query 2290  GCTGGAGGTCTGGACCCCCCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAGGATAGTCGTGATGCCCATCGC  2363
            |||||.||..||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||.||
Sbjct 2158  GCTGGGGGCTTGGATCCACCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAGGATAGTGGTGATGCCCATTGC  2231

Query 2364  CCGAGAGTTCTCTCCAGACCTAGTCCTGGTGTCTGCTGGATTTGATGCTGCTGAGGGTCACCCGGCCCCACTGG  2437
            |||||||||..||||||||||.|||||||||||||||||.|||||||||||.|||||||||||.|||||.||||
Sbjct 2232  CCGAGAGTTTGCTCCAGACCTGGTCCTGGTGTCTGCTGGGTTTGATGCTGCGGAGGGTCACCCAGCCCCGCTGG  2305

Query 2438  GTGGCTACCATGTTTCTGCCAAATGTTTTGGATACATGACGCAGCAACTGATGAACCTGGCAGGAGGCGCAGTG  2511
            |||||||||||||||||||||||||||||||.||||||||||||||..||||||||.|||||||||||||.|||
Sbjct 2306  GTGGCTACCATGTTTCTGCCAAATGTTTTGGGTACATGACGCAGCAGTTGATGAACTTGGCAGGAGGCGCCGTG  2379

Query 2512  GTGCTGGCCTTGGAGGGTGGCCATGACCTCACAGCCATCTGTGACGCCTCTGAGGCCTGTGTGGCTGCTCTTCT  2585
            |||.|||||||.||||||||.|||||||||||.|||||||||||.|||||.|||||||||||.|||||||||||
Sbjct 2380  GTGTTGGCCTTAGAGGGTGGACATGACCTCACGGCCATCTGTGATGCCTCGGAGGCCTGTGTAGCTGCTCTTCT  2453

Query 2586  GGGTAACAGGGTGGATCCCCTTTCAGAAGAAGGCTGGAAACAGAAACCCAACCTCAATGCCATCCGCTCTCTGG  2659
            |||.||||.||||||.|||||||||||||||.||||||||||||||||||||||||.||||||||||||.||||
Sbjct 2454  GGGCAACAAGGTGGACCCCCTTTCAGAAGAAAGCTGGAAACAGAAACCCAACCTCAGTGCCATCCGCTCGCTGG  2527

Query 2660  AGGCCGTGATCCGGGTGCACAGTAAATACTGGGGCTGCATGCAGCGCCTGGCCTCCTGTCCAGACTCCTGGGTG  2733
            |.||.|||.||.||||||||||.||||||||||||||||||||||||.|||||||||||||||||||||||.|.
Sbjct 2528  AAGCTGTGGTCAGGGTGCACAGGAAATACTGGGGCTGCATGCAGCGCTTGGCCTCCTGTCCAGACTCCTGGCTA  2601

Query 2734  CCTAGAGTGCCAGGGGCTGACAAAGAAGAAGTGGAGGCAGTGACCGCACTGGCGTCCCTCTCTGTGGGCATCCT  2807
            ||.||||||||.||.||||   |.|.|||||||||.||.||||||||.|||||.|||||.||||||||||||||
Sbjct 2602  CCCAGAGTGCCGGGAGCTG---ATGCAGAAGTGGAAGCCGTGACCGCGCTGGCATCCCTTTCTGTGGGCATCCT  2672

Query 2808  GGCTGAAGATAGGCCCTCGGAGCAGCTGGTGGAGGAGGAAGAACCTATGAATCTC  2862
            |||||||||.|||||||||||||.|||||||||.|||||||||||.|||||.|||
Sbjct 2673  GGCTGAAGACAGGCCCTCGGAGCGGCTGGTGGAAGAGGAAGAACCCATGAACCTC  2727

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