Nucleotide Global Alignment
Description
- Query:
- TRCN0000488732
- Subject:
- XR_001748761.1
- Aligned Length:
- 4501
- Identities:
- 2858
- Gaps:
- 1640
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGGGCGGCGGACGATGTTTGCCCGCAGCGCAGGGCTGTGCTTCCCCTGGGTCCCGGGAGTGAGTCACGGCGG 74
Query 1 -----------------------------------------------------ATGCACAGCC----------- 10
| ||.|||.|
Sbjct 75 AGACGCTGAGGAGGTGCTGGCGCAGCACCCCACCCCCACCGGGCGAGGGGCTGA-GCGCAGGCCTCGCCCCCCA 147
Query 11 ----CCGGCGCT------GATGGGACCCAGGTGAGCCCGGGTGCCCACTACTGCAGCCCCACTGGCGCAGGCTG 74
||.||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 148 GATTCCAGCGCTGAAGGAGATGGGACCCAGGTGAGCCCGGGTGCCCACTACTGCAGCCCCACTGGCGCAGGCTG 221
Query 75 CCCCAGGCCCTGTGCAGACACACCAGGCCCTCAGCCGCAGCCCATGGACCTGCGGGTGGGCCAGCGGCCCCCAG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 222 CCCCAGGCCCTGTGCAGACACACCAGGCCCTCAGCCGCAGCCCATGGACCTGCGGGTGGGCCAGCGGCCCCCAG 295
Query 149 TGGAGCCCCCACCAGAGCCCACATTGCTGGCCCTGCAGCGTCCCCAGCGCCTGCACCACCACCTCTTCCTAGCA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 296 TGGAGCCCCCACCAGAGCCCACATTGCTGGCCCTGCAGCGTCCCCAGCGCCTGCACCACCACCTCTTCCTAGCA 369
Query 223 GGCCTGCAGCAGCAGCGCTCGGTGGAGCCCATGAGGCTCTCCATGGACACGCCGATGCCCGAGTTGCAGGTGGG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 370 GGCCTGCAGCAGCAGCGCTCGGTGGAGCCCATGAGGCTCTCCATGGACACGCCGATGCCCGAGTTGCAGGTGGG 443
Query 297 ACCCCAGGAACAAGAGCTGCGGCAGCTTCTCCACAAGGACAAGAGCAAGCGAAGTGCTGTAGCCAGCAGCGTGG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444 ACCCCAGGAACAAGAGCTGCGGCAGCTTCTCCACAAGGACAAGAGCAAGCGAAGTGCTGTAGCCAGCAGCGTGG 517
Query 371 TCAAGCAGAAGCTAGCGGAGGTGATTCTGAAAAAACAGCAGGCGGCCCTAGAAAGAACAGTCCATCCCAACAGC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 518 TCAAGCAGAAGCTAGCGGAGGTGATTCTGAAAAAACAGCAGGCGGCCCTAGAAAGAACAGTCCATCCCAACAGC 591
Query 445 CCCGGCATTCCCTACAGAACCCTGGAGCCCCTGGAGACGGAAGGAGCCACCCGCTCCATGCTCAGCAGCTTTTT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 CCCGGCATTCCCTACAGAACCCTGGAGCCCCTGGAGACGGAAGGAGCCACCCGCTCCATGCTCAGCAGCTTTTT 665
Query 519 GCCTCCTGTTCCCAGCCTGCCCAGTGACCCCCCAGAGCACTTCCCTCTGCGCAAGACAGTCTCTGAGCCCAACC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 GCCTCCTGTTCCCAGCCTGCCCAGTGACCCCCCAGAGCACTTCCCTCTGCGCAAGACAGTCTCTGAGCCCAACC 739
Query 593 TGAAGCTGCGCTATAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAATCCACTGCTCCGAAAGGAGAGTGCGCCC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 740 TGAAGCTGCGCTATAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAATCCACTGCTCCGAAAGGAGAGTGCGCCC 813
Query 667 CCCAGCCTCCGGCGGCGGCCCGCAGAGACCCTCGGAGACTCCTCCCCAAGTAGTAGCAGCACGCCCGCATCAGG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 CCCAGCCTCCGGCGGCGGCCCGCAGAGACCCTCGGAGACTCCTCCCCAAGTAGTAGCAGCACGCCCGCATCAGG 887
Query 741 GTGCAGCTCCCCCAATGACAGCGAGCACGGCCCCAATCCCATCCTGGGCTCGGA-------------------- 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 GTGCAGCTCCCCCAATGACAGCGAGCACGGCCCCAATCCCATCCTGGGCTCGGAGGCGCTCTTGGGCCAGCGGC 961
Query 795 -------------------------------------------------------------------------- 794
Sbjct 962 TGCGGCTGCAGGAGACTTCTGTGGCCCCGTTCGCCTTGCCGACAGTGTCCTTGCTGCCCGCAATCACTCTGGGG 1035
Query 795 -----------------GGCTGACAGTGACCGCAGGACCCATCCGACTCTGGGCCCTCGGGGGCCAATCCTGGG 851
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 CTGCCCGCCCCTGCCAGGGCTGACAGTGACCGCAGGACCCATCCGACTCTGGGCCCTCGGGGGCCAATCCTGGG 1109
Query 852 GAGCCCCCACACTCCCCTCTTCCTGCCCCATGGCTTGGAGCCCGAGGCTGGGGGCACCTTGCCCTCTCGCCTGC 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 GAGCCCCCACACTCCCCTCTTCCTGCCCCATGGCTTGGAGCCCGAGGCTGGGGGCACCTTGCCCTCTCGCCTGC 1183
Query 926 AGCCCATTCTCCTCCTGGACCCCTCAGGCTCTCATGCCCCGCTGCTGACTGTGCCCGGGCTTGGGCCCTTGCCC 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 AGCCCATTCTCCTCCTGGACCCCTCAGGCTCTCATGCCCCGCTGCTGACTGTGCCCGGGCTTGGGCCCTTGCCC 1257
Query 1000 TTCCACTTTGCCCAGTCCTTAATGACCACCGAGCGGCTCTCTGGGTCAGGCCTCCACTGGCCACTGAGCCGGAC 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 TTCCACTTTGCCCAGTCCTTAATGACCACCGAGCGGCTCTCTGGGTCAGGCCTCCACTGGCCACTGAGCCGGAC 1331
Query 1074 TCGCTCAGAGCCCCTGCCCCCCAGTGCCACCGCTCCCCCACCGCCGGGCCCCATGCAGCCCCGCCTGGAGCAGC 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 TCGCTCAGAGCCCCTGCCCCCCAGTGCCACCGCTCCCCCACCGCCGGGCCCCATGCAGCCCCGCCTGGAGCAGC 1405
Query 1148 TCAAAACTCACGTCCAGGTGATCAAGAGGTCAGCCAAGCCGAGTGAGAAGCCCCGGCTGCGGCAGATACCCTCG 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 TCAAAACTCACGTCCAGGTGATCAAGAGGTCAGCCAAGCCGAGTGAGAAGCCCCGGCTGCGGCAGATACCCTCG 1479
Query 1222 GCTGAAGACCTGGAGACAGATGGCGGGGGACCGGGCCAGGTGGTGGACGATGGCCTGGAGCACAGGGAGCTGGG 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480 GCTGAAGACCTGGAGACAGATGGCGGGGGACCGGGCCAGGTGGTGGACGATGGCCTGGAGCACAGGGAGCTGGG 1553
Query 1296 CCATGGGCAGCCTGAGGCCAGAGGCCCCGCTCCTCTCCAGCAGCACCCTCAGGTGTTGCTCTGGGAACAGCAGC 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 CCATGGGCAGCCTGAGGCCAGAGGCCCCGCTCCTCTCCAGCAGCACCCTCAGGTGTTGCTCTGGGAACAGCAGC 1627
Query 1370 GACTGGCTGGGCGGCTCCCCCGGGGCAGCACCGGGGACACTGTGCTGCTTCCTCTGGCCCAGGGTGGGCACCGG 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 GACTGGCTGGGCGGCTCCCCCGGGGCAGCACCGGGGACACTGTGCTGCTTCCTCTGGCCCAGGGTGGGCACCGG 1701
Query 1444 CCTCTGTCCCGGGCTCAGTCTTCCCCAGCCGCACCTGCCTCACTGTCAGCCCCAGAGCCTGCCAGCCAGGCCCG 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702 CCTCTGTCCCGGGCTCAGTCTTCCCCAGCCGCACCTGCCTCACTGTCAGCCCCAGAGCCTGCCAGCCAGGCCCG 1775
Query 1518 AGTCCTCTCCAGCTCAGAGACCCCTGCCAGGACCCTGCCCTTCACCACAGGGCTGATCTATGACTCGGTCATGC 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1776 AGTCCTCTCCAGCTCAGAGACCCCTGCCAGGACCCTGCCCTTCACCACAGGGCTGATCTATGACTCGGTCATGC 1849
Query 1592 TGAAGCACCAGTGCTCCTGCGGTGACAACAGCAGGCACCCGGAGCACGCCGGCCGCATCCAGAGCATCTGGTCC 1665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1850 TGAAGCACCAGTGCTCCTGCGGTGACAACAGCAGGCACCCGGAGCACGCCGGCCGCATCCAGAGCATCTGGTCC 1923
Query 1666 CGGCTGCAGGAGCGGGGGCTCCGGAGCCAGTGTGAGTGTCTCCGAGGCCGGAAGGCCTCCCTGGAAGAGCTGCA 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1924 CGGCTGCAGGAGCGGGGGCTCCGGAGCCAGTGTGAGTGTCTCCGAGGCCGGAAGGCCTCCCTGGAAGAGCTGCA 1997
Query 1740 GTCGGTCCACTCTGAGCGGCACGTGCTCCTCTACGGCACCAACCCGCTCAGCCGCCTCAAACTGGACAACGGGA 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1998 GTCGGTCCACTCTGAGCGGCACGTGCTCCTCTACGGCACCAACCCGCTCAGCCGCCTCAAACTGGACAACGGGA 2071
Query 1814 AGCTGGCAGGGCTCCTGGCACAGCGGATGTTTGTGATGCTGCCCTGTGGTGGGGTTGG---------------- 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2072 AGCTGGCAGGGCTCCTGGCACAGCGGATGTTTGTGATGCTGCCCTGTGGTGGGGTTGGGCCTCTTGCGACTCTC 2145
Query 1872 -------------------------------------------------------------------------- 1871
Sbjct 2146 TCTGCCTTCCTCGCCTCTCTTGGTCTGCCTCGCCCTCCCCATCTCCCCATCATGCCCCCCGGCCCCTCCCTAGC 2219
Query 1872 -------------------------------------------------------------------------- 1871
Sbjct 2220 CTTGAGGCCCAGGGACTGGGTTTGGGGGGCCTCCCAGCCTGGGCTAGGGGCCCTGAGTGGAAGACAGTGGTGCA 2293
Query 1872 -------------------------------------------------------------------------- 1871
Sbjct 2294 GACGGCCCCTCCAGCTCCGACCGTCCCGCAGGGCCTGAGCAGAGTCAGCTGGGGCTTAAAACCCCCTCCCGGCC 2367
Query 1872 --------------------GGTGGACACTGACACCATCTGGAATGAGCTTCATTCCTCCAATGCAGCCCGCTG 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2368 CAAACCCCAAGTCCCGCCCAGGTGGACACTGACACCATCTGGAATGAGCTTCATTCCTCCAATGCAGCCCGCTG 2441
Query 1926 GGCCGCTGGCAGTGTCACTGACCTCGCCTTCAAAGTGGCTTCTCGTGAGCTAAAGAATGGTTTCGCTGTGGTGC 1999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2442 GGCCGCTGGCAGTGTCACTGACCTCGCCTTCAAAGTGGCTTCTCGTGAGCTAAAGAATGGTTTCGCTGTGGTGC 2515
Query 2000 GGCCCCCAGGACACCATGCAGATCATTCAACAGCCATGGGCTTCTGCTTCTTCAACTCAGTGGCCATCGCCTGC 2073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2516 GGCCCCCAGGACACCATGCAGATCATTCAACAGCCATGGGCTTCTGCTTCTTCAACTCAGTGGCCATCGCCTGC 2589
Query 2074 CGGCAGCTGCAACAGCAGAGCAAGGCCAGCAAGATCCTCATTGTAGACTGGGACGTGCACCATGGCAACGGCAC 2147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2590 CGGCAGCTGCAACAGCAGAGCAAGGCCAGCAAGATCCTCATTGTAGACTGGGACGTGCACCATGGCAACGGCAC 2663
Query 2148 CCAGCAAACCTTCTACCAAGACCCCAGTGTGCTCTACATCTCCCTGCATCGCCATGACGACGGCAACTTCTTCC 2221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2664 CCAGCAAACCTTCTACCAAGACCCCAGTGTGCTCTACATCTCCCTGCATCGCCATGACGACGGCAACTTCTTCC 2737
Query 2222 CGGGGAGTGGGGCTGTGGATGAGGTAGGGGCTGGCAGCGGTGAGGGCTTCAATGTCAATGTGGCCTGGGCTGGA 2295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2738 CGGGGAGTGGGGCTGTGGATGAGGTAGGGGCTGGCAGCGGTGAGGGCTTCAATGTCAATGTGGCCTGGGCTGGA 2811
Query 2296 GGTCTGGACCCCCCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAGGATAGTCGTGATGCCCATCGCCCGAGA 2369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2812 GGTCTGGACCCCCCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAGGATAGTCGTGATGCCCATCGCCCGAGA 2885
Query 2370 GTTCTCTCCAGACCTAGTCCTGGTGTCTGCTGGATTTGATGCTGCTGAGGGTCACCCGGCCCCACTGGGTGGCT 2443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2886 GTTCTCTCCAGACCTAGTCCTGGTGTCTGCTGGATTTGATGCTGCTGAGGGTCACCCGGCCCCACTGGGTGGCT 2959
Query 2444 ACCATGTTTCTGCCAAATGTTTTGGATACATGACGCAGCAACTGATGAACCTGGCAGGAGGCGCAGTGGTGCTG 2517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2960 ACCATGTTTCTGCCAAATGTTTTGGATACATGACGCAGCAACTGATGAACCTGGCAGGAGGCGCAGTGGTGCTG 3033
Query 2518 GCCTTGGAGGGTGGCCATGACCTCACAGCCATCTGTGACGCCTCTGAGGCCTGTGTGGCTGCTCTTCTGGGTAA 2591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3034 GCCTTGGAGGGTGGCCATGACCTCACAGCCATCTGTGACGCCTCTGAGGCCTGTGTGGCTGCTCTTCTGGGTAA 3107
Query 2592 CAGGGTGGATCCCCTTTCAGAAGAAGGCTGGAAACAGAAACCCAACCTCAATGCCATCCGCTCTCTGGAGGCCG 2665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3108 CAGGGTGGATCCCCTTTCAGAAGAAGGCTGGAAACAGAAACCCAACCTCAATGCCATCCGCTCTCTGGAGGCCG 3181
Query 2666 TGATCCGGGTGCACAGTAAATACTGGGGCTGCATGCAGCGCCTGGCCTCCTGTCCAGACTCCTGGGTGCCTAGA 2739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3182 TGATCCGGGTGCACAGTAAATACTGGGGCTGCATGCAGCGCCTGGCCTCCTGTCCAGACTCCTGGGTGCCTAGA 3255
Query 2740 GTGCCAGGGGCTGACAAAGAAGAAGTGGAGGCAGTGACCGCACTGGCGTCCCTCTCTGTGGGCATCCTGGCTGA 2813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3256 GTGCCAGGGGCTGACAAAGAAGAAGTGGAGGCAGTGACCGCACTGGCGTCCCTCTCTGTGGGCATCCTGGCTGA 3329
Query 2814 AGATAGGCCCTCGGAGCAGCTGGTGGAGGAGGAAGAACCTATGAATCTC------------------------- 2862
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3330 AGATAGGCCCTCGGAGCAGCTGGTGGAGGAGGAAGAACCTATGAATCTCTAAGGCTCTGGAACCATCTGCCCGC 3403
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 3404 CCACCATGCCCTTGGGACCTGGTTCTCTTCTAACCCCTGGCAATAGCCCCCATTCCTGGGTCTTTAGAGATCCT 3477
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 3478 GTGGGCAAGTAGTTGGAACCAGAGAACAGCCTGCCTGCTTTGACAGTTATCCCAGGGAGCGTGAGAAAATCCCT 3551
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 3552 GGGTCTAGAATGGGAACTGGAGAGGACCCTGAGAGGAGACGGGCTGGGCGGCGACCCCCACAGGGCTCTCGAGA 3625
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 3626 ACAGATTCTCCCCTCCAGTATGGGCCCTGGCTGTGGCCCCCATTCCTCAGGACTGCACAGAGGAGGACTGGCTC 3699
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 3700 CGGCTCCGTCGGGCTCACCCTTAACCACTATTCCTGGCTCTGCAAACCCCAGACTTTGCACACAGCCTCAGGCT 3773
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 3774 CCACACAGAAATGTGAACTTGGCCTCAGACAGGCTGGCCCTTCCTAGGCTCTAGGGGCTAGGGGGGAGTGGGGA 3847
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 3848 GCCAAGAGGTCCCATATTCCTGAGTGCAGGGGTAGTCCCTCTCACCTGCTTCCTCAGACGACTCTGGAAGCTTC 3921
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 3922 CCTCTACCACTGGGCACTGAGACGAAGCTCCCTGACAGCCGAGACTGGCAGCCCTCCATCTGGTCCGTACCCTC 3995
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 3996 GCCAGAGGCCCCCCTACATCAACCTCCTGGCGATGCCCTGGTGGAGCAGATGGGTGCTCTGGGAGTCCTGTGCT 4069
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 4070 TCCTGATCCAATGGTGCCAAACCCTTCATCTCCCCAAGAAGCGCAGCATACCCCTGGGACCCCTCGGCCACTGC 4143
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 4144 CCACTCGGGGAGCCTTCTCTGTTTCTGGGGCCTCCCCCACCATAGCTCTGATTCCCACCCCACATAGGAGTAGC 4217
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 4218 CTGACTGAGGGGGAAGGGGTGGGAGAGAAGATACAGACATGGAGGAGGGGAGGCTGCTCTGGCAAAGTCTTCAA 4291
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 4292 GGCTTTTGGGGGTCCAGGCCTGGGGTCAAGAAGGAAAATGTGTGTGAGCATGTGTGTGAGTGAGGCGTGTGTGT 4365
Query 2863 -------------------------------------------------------------------------- 2862
Sbjct 4366 GAGCGTGTGTGTGAGTGAGGCGTGTGTGTGTGTCTTTCCTAGGACCCACCATACCCTGTGTATGTATGCATGTT 4439
Query 2863 ------------------------------------------------------------- 2862
Sbjct 4440 TTTGTAAAAAGGAAGAAAATGGAAAAAAATCTGAACAATAAATGTTTTATTTGCTTTAAAA 4500