Nucleotide Global Alignment

Description

Query:
TRCN0000488732
Subject:
XR_875306.1
Aligned Length:
3002
Identities:
2139
Gaps:
534

Alignment

Query    1  ATGCACAGCCCCGGCGCTGATGGGACCCAGGTGAGCCCGGGTGCCCACTACTGCAGCCCCACTGGCGCAGGCTG  74
                                                                                  ||||
Sbjct    1  ----------------------------------------------------------------------GCTG  4

Query   75  CCCCAGGCCCT---GTGCAGACACACCAGGCCCTCAGCCGCAGCCCATGGACCTGCGGGTGGGCCAGCGGCCCC  145
            |||  .|||||   | .||||||||||||||.|||||||.||.||||||||||||||||||||||||||||||.
Sbjct    5  CCC--TGCCCTCCAG-CCAGACACACCAGGCTCTCAGCCCCAACCCATGGACCTGCGGGTGGGCCAGCGGCCCA  75

Query  146  CAGTGGAGCCCCCACCAGAGCCCACATTGCTGGCCCTGCAGCGTCCCCAGCGCCTGCACCACCACCTCTTCCTA  219
            |.||||||||||||||||||||..|..|||||.|||||||.|..|||||.||||||||||.|||.||||||||.
Sbjct   76  CGGTGGAGCCCCCACCAGAGCCTGCGCTGCTGACCCTGCAACACCCCCAACGCCTGCACCGCCATCTCTTCCTG  149

Query  220  GCAGGC---CTGCAGCAGCAGCGCTCGGTGGAGCCCATGAGGCTCTCCATGGACACGCCGATGCCCGAGTTGCA  290
            ||||||   |..|||||.||||||||.|..||||||||||||||||||||||||.|.||.|||||.|||.||||
Sbjct  150  GCAGGCTTACACCAGCAACAGCGCTCAGCCGAGCCCATGAGGCTCTCCATGGACCCACCAATGCCGGAGCTGCA  223

Query  291  GGTGGGACCCCAGGAACAAGAGCTGCGGCAGCTTCTCCACAAGGACAAGAGCAAGCGAAGTGCTGTAGCCAGCA  364
            ||.|||||..|||||.|||||.||.|||||.||||||.|.||.||||||||||||||||||||.||||||||||
Sbjct  224  GGGGGGACAGCAGGAGCAAGAACTTCGGCAACTTCTCAATAAAGACAAGAGCAAGCGAAGTGCCGTAGCCAGCA  297

Query  365  GCGTGGTCAAGCAGAAGCTAGCGGAGGTGATTCTGAAAAAACAGCAGGCGGCCCTAGAAAGAACAGTCCATCCC  438
            |.|||||||||||||||||.||.||.|||||.|||||.|||||||||||.|||||.||.|||||||||||||||
Sbjct  298  GTGTGGTCAAGCAGAAGCTGGCTGAAGTGATCCTGAAGAAACAGCAGGCAGCCCTTGAGAGAACAGTCCATCCC  371

Query  439  AACAGCCCCGGCATTCCCTACAGAACCCTGGAGCCCCTGGAGACGGAAGGAGCCACCCGCTCCATGCTCAGCAG  512
            |.|||||||.|.||||||||||||||.||.||||||.||||.||.||.||.||..||||||||.||||.|||||
Sbjct  372  AGCAGCCCCAGTATTCCCTACAGAACTCTTGAGCCCTTGGACACAGAGGGTGCTGCCCGCTCCGTGCTTAGCAG  445

Query  513  CTTTTTGCCTCCTGTTCCCAGCCTGCCCAGTGACCCCCCAGAGCAC-TTCCCTCTGCGCAAGACAGTCTCTGAG  585
            |||..||||||||||||||||||||||||.|||.|||||.||.||| |||||| ||||.||.|||||.|||||.
Sbjct  446  CTTCCTGCCTCCTGTTCCCAGCCTGCCCACTGAACCCCCGGAACACTTTCCCT-TGCGTAAAACAGTGTCTGAA  518

Query  586  CCCAACCTGAAGCTGCGCTATAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAATCCACTGCTCCGAAAGGAGAG  659
            ||||||||||||.|||||||.||.||||||||.|||||||||.|..|.||||||||.||||||.|.||||||||
Sbjct  519  CCCAACCTGAAGTTGCGCTACAAACCCAAGAAATCCCTGGAGAGACGCAAGAATCCCCTGCTCAGGAAGGAGAG  592

Query  660  TGCGCCCCCCAGCCTCCGGCGGCGGCCCGCAGAGACCCTCGGAGACTCCTCCCCAAGTAGTAGCAGCACGCCCG  733
            |||.||.||||||||.|||.||.||||.||.||||||||.|||||.||||||||.||||||||||||||.||||
Sbjct  593  TGCCCCGCCCAGCCTTCGGAGGAGGCCTGCCGAGACCCTTGGAGATTCCTCCCCCAGTAGTAGCAGCACACCCG  666

Query  734  CATCAGGGTGCAGCTCCCCCAATGACAGCGAGCACGGCCCCAATCCCATCCTGGGCTCGGA-------------  794
            |.|||||||||||||||||.||||||||||||||.|||||.||.||...|||.|||||.||             
Sbjct  667  CGTCAGGGTGCAGCTCCCCTAATGACAGCGAGCATGGCCCTAACCCTGCCCTAGGCTCAGAGGCGCTCTTGGGC  740

Query  795  --------------------------------------------------------------------------  794
                                                                                      
Sbjct  741  CAGCGGCTGCGGCTGCAGGAGACTTCTCTGGCCCCGTTCGCTTTGCCGACAGTGTCCTTGCTGCCCGCAATCAC  814

Query  795  ------------------------GGCTGACAGTGACCGCAGGACCCATCCGACTCTGGGCCCTCGGGGGCCAA  844
                                    ||||||..|||||||||||||||||.|.|||.|.|||||||||||.||..
Sbjct  815  ACTGGGGCTGCCTGCCCCTGCCAGGGCTGATGGTGACCGCAGGACCCATTCAACTTTAGGCCCTCGGGGTCCTG  888

Query  845  TCCTGGGGAGCCCCCACACTCCCCTCTTCCTGCCCCATGGCTTGGAGCCCGAGGCTGGGGGCACCTTGCCCTCT  918
            |.|||||||.||||||..|||||||||||||||.|||.||..|||||||.|||||||||||||||||.||||||
Sbjct  889  TACTGGGGAACCCCCATGCTCCCCTCTTCCTGCACCACGGTCTGGAGCCAGAGGCTGGGGGCACCTTACCCTCT  962

Query  919  CGCCTGCAGCCCATTCTCCTCCTGGACCCCTCAGGCTCTCATGCCCCGCTGCTGACTGTGCCCGGGCTTGGGCC  992
            ||||||||.|||||||||||.|||||||||||||.||||||||||||.|||..|||||||||.||.||||||||
Sbjct  963  CGCCTGCAACCCATTCTCCTGCTGGACCCCTCAGTCTCTCATGCCCCACTGTGGACTGTGCCTGGCCTTGGGCC  1036

Query  993  CTTGCCCTTCCACTTTGCCCAGTCCTTAATGACCACCGAGCGGCTCTCTGGGTCAGGCCTCCACTGGCCACTGA  1066
            ||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||..|.|||||.|
Sbjct 1037  CTTGCCCTTCCACTTTGCCCAGCCCTTACTGACCACCGAGCGGCTCTCTGGGTCAGGCCTCCATCGACCACTTA  1110

Query 1067  GCCGGACTCGCTCAGAGCCCCTGCCCCCCAGTGCCACCGCTCCCCCACCGCCGGGCCCCATGCAGCCCCGCCTG  1140
            .||||||.|||||||||||||||||||||||.|||||.||..||||.|.||.||.||||.||||||||||||.|
Sbjct 1111  ACCGGACCCGCTCAGAGCCCCTGCCCCCCAGCGCCACAGCCTCCCCTCTGCTGGCCCCCCTGCAGCCCCGCCAG  1184

Query 1141  GAGCAGCTCAAAACTCACGTCCAGGTGATCA---------------------AGAGGTCAGCCAAGCCGAGTGA  1193
            ||.|.|||||||.|||||||||||.||||||                     |||||.|.||||||||.|||||
Sbjct 1185  GATCGGCTCAAACCTCACGTCCAGCTGATCAAGCCAGCCATCTCCCCTCCCCAGAGGCCTGCCAAGCCCAGTGA  1258

Query 1194  GAAGCCCCGGCTGCGGCAGATACCCTCGGCTGAAGACCTGGAGACAGATGGCGGGGGACCGGGCCAGGTGGTGG  1267
            |||||||||.|||||.|||||||||||||||||.|||||.|||||||||||.||||||..|||.|...|||.|.
Sbjct 1259  GAAGCCCCGACTGCGACAGATACCCTCGGCTGAGGACCTAGAGACAGATGGTGGGGGAGTGGGACCTATGGCGA  1332

Query 1268  ACGATGGCCTGGAGCACAGGGAGCTGGGCCATGGGCAGCCTGAGGCCAGAGGCCCCGCTCCTCTCCAGCAGCAC  1341
            |.|||||||||||.||.||||||...||||.|||||..|||||||.|||||||.||..|.||||.||||||||.
Sbjct 1333  ATGATGGCCTGGAACATAGGGAGTCAGGCCGTGGGCCTCCTGAGGGCAGAGGCTCCATTTCTCTGCAGCAGCAT  1406

Query 1342  CCTCAGGTGTTGCTCTGGGAACAGCAGCGACTGGCTGGGCGGCTCCCCCGGGGCAGCACCGGGGACACTGTGCT  1415
            |..||||||...|.||||||.|||||||..||.||.|||||||||.|.|.|||.|||.||||||||.|.|||||
Sbjct 1407  CAACAGGTGCCACCCTGGGAGCAGCAGCATCTAGCCGGGCGGCTCTCTCAGGGAAGCCCCGGGGACTCCGTGCT  1480

Query 1416  GCTTCCTCTGGCCCAGGGTGGGCACCGGCCTCTGTCCCGGGCTCAGTCTTCCCCAGCCGCACCTGCCTCACTG-  1488
            |.|.|||||||||||||.|||.||||||||.||||||.|..|.||||||||||||||.|||||||.|||.||| 
Sbjct 1481  GATACCTCTGGCCCAGGTTGGACACCGGCCCCTGTCCAGAACCCAGTCTTCCCCAGCAGCACCTGTCTCCCTGC  1554

Query 1489  TCAGCCCCAGAGCCTGCCAGCCAGGCCCGAGTCCTCTCCAGCTCAGAGACCCCTGCCAGGACCCTGCCCTTCAC  1562
            |.|| |||||||||..||.|.|||.|||.|||||||..||||||||||||.||||                  |
Sbjct 1555  TGAG-CCCAGAGCCCACCTGTCAGACCCAAGTCCTCAACAGCTCAGAGACACCTG------------------C  1609

Query 1563  CACAGGGCTGATCTATGACTCGGTCATGCTGAAGCACCAGTGCTCCTGCGGTGACAACAGCAGGCACCCGGAGC  1636
            .|||||||||.|||||||||||||.||||||||.|||||.||.|||||.||.||||||||||.|||.||.||||
Sbjct 1610  TACAGGGCTGGTCTATGACTCGGTGATGCTGAAACACCAATGTTCCTGTGGAGACAACAGCAAGCATCCCGAGC  1683

Query 1637  ACGCCGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAGCGGGGGCTCCGGAGCCAGTGTGAGTGTCTCCGA  1710
            |.||.|||||||||||||||||||||||||||||||||||.|||||.|||||.|||||||||||||||||||||
Sbjct 1684  ATGCAGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAACGGGGTCTCCGCAGCCAGTGTGAGTGTCTCCGA  1757

Query 1711  GGCCGGAAGGCCTCCCTGGAAGAGCTGCAGTCGGTCCACTCTGAGCGGCACGTGCTCCTCTACGGCACCAACCC  1784
            |||||.|||||.|||||.||.|||||||||||.|||||||||||.|||||||||||||||||||||||.|||||
Sbjct 1758  GGCCGAAAGGCTTCCCTAGAGGAGCTGCAGTCAGTCCACTCTGAACGGCACGTGCTCCTCTACGGCACGAACCC  1831

Query 1785  GCTCAGCCGCCTCAAACTGGACAACGGGAAGCTGGCAGGGCTCCTGGCACAGCGGATGTTTGTGATGCTGCCCT  1858
            .||||||||||||||||||||.|||||||||||..||||.||||||||||||||||.||||||||||||.||||
Sbjct 1832  ACTCAGCCGCCTCAAACTGGATAACGGGAAGCTTACAGGACTCCTGGCACAGCGGACGTTTGTGATGCTACCCT  1905

Query 1859  GTGGTGGGGTTGGGGTGGACACTGACACCATCTGGAATGAGCTTCATTCCTCCAATGCAGCCCGCTGGGCCGCT  1932
            ||||.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||||||||||||||.||.
Sbjct 1906  GTGGCGGGGTTGGGGTCGATACTGACACCATCTGGAACGAGCTGCATTCCTCCAATGCAGCCCGCTGGGCTGCG  1979

Query 1933  GGCAGTGTCACTGACCTCGCCTTCAAAGTGGCTTCTCGTGAGCTAAAGAATGGTTTCGCTGTGGTGCGGCCCCC  2006
            |||||||||||.|||||.|||||||||||.|||||.||.|||||.||||||||.||.|||||||||||.|||||
Sbjct 1980  GGCAGTGTCACCGACCTTGCCTTCAAAGTAGCTTCCCGAGAGCTGAAGAATGGCTTTGCTGTGGTGCGACCCCC  2053

Query 2007  AGGACACCATGCAGATCATTCAACAGCCATGGGCTTCTGCTTCTTCAACTCAGTGGCCATCGCCTGCCGGCAGC  2080
            .||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||.||||
Sbjct 2054  GGGACACCATGCAGATCATTCTACAGCCATGGGCTTCTGCTTCTTCAACTCCGTGGCCATCGCCTGCCGACAGC  2127

Query 2081  TGCAACAGCAGAGCAAGGCCAGCAAGATCCTCATTGTAGACTGGGACGTGCACCATGGCAACGGCACCCAGCAA  2154
            |.||.||.||..||||.||||||||||||||||||||.||||||||.||.|||||||||||||||||.|||||.
Sbjct 2128  TACAGCAACACGGCAAAGCCAGCAAGATCCTCATTGTTGACTGGGATGTTCACCATGGCAACGGCACACAGCAG  2201

Query 2155  ACCTTCTACCAAGACCCCAGTGTGCTCTACATCTCCCTGCATCGCCATGACGACGGCAACTTCTTCCCGGGGAG  2228
            ||.||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||.||.||
Sbjct 2202  ACTTTCTACCAGGACCCCAGTGTGCTCTACATTTCCCTTCATCGCCATGACGACGGCAACTTCTTCCCAGGCAG  2275

Query 2229  TGGGGCTGTGGATGAGGTAGGGGCTGGCAGCGGTGAGGGCTTCAATGTCAATGTGGCCTGGGCTGGAGGTCTGG  2302
            ||||||.|||||||||||.||..|||||||.||.|||||||||||||||||.|||||.||||||||.||..|||
Sbjct 2276  TGGGGCCGTGGATGAGGTGGGAACTGGCAGTGGCGAGGGCTTCAATGTCAACGTGGCTTGGGCTGGGGGCTTGG  2349

Query 2303  ACCCCCCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAGGATAGTCGTGATGCCCATCGCCCGAGAGTTCTCT  2376
            |.||.|||||||||||||||||||||||||||||||||||                                  
Sbjct 2350  ATCCACCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAG----------------------------------  2389

Query 2377  CCAGACCTAGTCCTGGTGTCTGCTGGATTTGATGCTGCTGAGGGTCACCCGGCCCCACTGGGTGGCTACCATGT  2450
                                                                                      
Sbjct 2390  --------------------------------------------------------------------------  2389

Query 2451  TTCTGCCAAATGTTTTGGATACATGACGCAGCAACTGATGAACCTGGCAGGAGGCGCAGTGGTGCTGGCCTTGG  2524
                       |||||||.||||||||||||||..||||||||.|||||||||||||.||||||.|||||||.|
Sbjct 2390  -----------GTTTTGGGTACATGACGCAGCAGTTGATGAACTTGGCAGGAGGCGCCGTGGTGTTGGCCTTAG  2452

Query 2525  AGGGTGGCCATGACCTCACAGCCATCTGTGACGCCTCTGAGGCCTGTGTGGCTGCTCTTCTGGGTAACAGGGTG  2598
            |||||||.|||||||||||.|||||||||||.|||||.|||||||||||.||||||||||||||.||||.||||
Sbjct 2453  AGGGTGGACATGACCTCACGGCCATCTGTGATGCCTCGGAGGCCTGTGTAGCTGCTCTTCTGGGCAACAAGGTG  2526

Query 2599  GATCCCCTTTCAGAAGAAGGCTGGAAACAGAAACCCAACCTCAATGCCATCCGCTCTCTGGAGGCCGTGATCCG  2672
            ||.|||||||||||||||.||||||||||||||||||||||||.||||||||||||.|||||.||.|||.||.|
Sbjct 2527  GACCCCCTTTCAGAAGAAAGCTGGAAACAGAAACCCAACCTCAGTGCCATCCGCTCGCTGGAAGCTGTGGTCAG  2600

Query 2673  GGTGCACAGTAAATACTGGGGCTGCATGCAGCGCCTGGCCTCCTGTCCAGACTCCTGGGTGCCTAGAGTGCCAG  2746
            ||||||||                                                                  
Sbjct 2601  GGTGCACA------------------------------------------------------------------  2608

Query 2747  GGGCTGACAAAGAAGAAGTGGAGGCAGTGACCGCACTGGCGTCCCTCTCTGTGGGCATCCTGGCTGAAGATAGG  2820
                                                                                      
Sbjct 2609  --------------------------------------------------------------------------  2608

Query 2821  CCCTCGGAGCAGCTGGTGGAGGAGGAAGAACCTATGAATCTC  2862
                                                      
Sbjct 2609  ------------------------------------------  2608

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