Nucleotide Global Alignment

Description

Query:
TRCN0000488732
Subject:
XR_875307.2
Aligned Length:
3258
Identities:
1796
Gaps:
1172

Alignment

Query    1  ATGCACAGCCCCGGCGCTGATGGGACCCAGGTGAGCCCGGGTGCCCACTACTGCAGCCCCACTGGCGCAGGCTG  74
                                                                                  ||||
Sbjct    1  ----------------------------------------------------------------------GCTG  4

Query   75  CCCCAGGCCCT---GTGCAGACACACCAGGCCCTCAGCCGCAGCCCATGGACCTGCGGGTGGGCCAGCGGCCCC  145
            |||  .|||||   | .||||||||||||||.|||||||.||.||||||||||||||||||||||||||||||.
Sbjct    5  CCC--TGCCCTCCAG-CCAGACACACCAGGCTCTCAGCCCCAACCCATGGACCTGCGGGTGGGCCAGCGGCCCA  75

Query  146  CAGTGGAGCCCCCACCAGAGCCCACATTGCTGGCCCTGCAGCGTCCCCAGCGCCTGCACCACCACCTCTTCCTA  219
            |.||||||||||||||||||||..|..|||||.|||||||.|..|||||.||||||||||.|||.||||||||.
Sbjct   76  CGGTGGAGCCCCCACCAGAGCCTGCGCTGCTGACCCTGCAACACCCCCAACGCCTGCACCGCCATCTCTTCCTG  149

Query  220  GCAGGC---CTGCAGCAGCAGCGCTCGGTGGAGCCCATGAGGCTCTCCATGGACACGCCGATGCCCGAGTTGCA  290
            ||||||   |..|||||.||||||||.|..||||||||||||||||||||||||.|.||.|||||.|||.||||
Sbjct  150  GCAGGCTTACACCAGCAACAGCGCTCAGCCGAGCCCATGAGGCTCTCCATGGACCCACCAATGCCGGAGCTGCA  223

Query  291  GGTGGGACCCCAGGAACAAGAGCTGCGGCAGCTTCTCCACAAGGACAAGAGCAAGCGAAGTGCTGTAGCCAGCA  364
            ||.|||||..|||||.|||||.||.|||||.||||||.|.||.||||||||||||||||||||.||||||||||
Sbjct  224  GGGGGGACAGCAGGAGCAAGAACTTCGGCAACTTCTCAATAAAGACAAGAGCAAGCGAAGTGCCGTAGCCAGCA  297

Query  365  GCGTGGTCAAGCAGAAGCTAGCGGAGGTGATTCTGAAAAAACAGCAGGCGGCCCTAGAAAGAACAGTCCATCCC  438
            |.|||||||||||||||||.||.||.|||||.|||||.|||||||||||.|||||.||.|||||||||||||||
Sbjct  298  GTGTGGTCAAGCAGAAGCTGGCTGAAGTGATCCTGAAGAAACAGCAGGCAGCCCTTGAGAGAACAGTCCATCCC  371

Query  439  AACAGCCCCGGCATTCCCTACAGAACCCTGGAGCCCCTGGAGACGGAAGGAGCCACCCGCTCCATGCTCAGCAG  512
            |.|||||||.|.||||||||||||||.||.||||||.||||.||.||.||.||..||||||||.||||.|||||
Sbjct  372  AGCAGCCCCAGTATTCCCTACAGAACTCTTGAGCCCTTGGACACAGAGGGTGCTGCCCGCTCCGTGCTTAGCAG  445

Query  513  CTTTTTGCCTCCTGTTCCCAGCCTGCCCAGTGACCCCCCAGAGCAC-TTCCCTCTGCGCAAGACAGTCTCTGAG  585
            |||..||||||||||||||||||||||||.|||.|||||.||.||| |||||| ||||.||.|||||.|||||.
Sbjct  446  CTTCCTGCCTCCTGTTCCCAGCCTGCCCACTGAACCCCCGGAACACTTTCCCT-TGCGTAAAACAGTGTCTGAA  518

Query  586  CCCAACCTGAAGCTGCGCTATAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAATCCACTGCTCCGAAAGGAGAG  659
            ||||||||||||.|||||||.||.||||||||.|||||||||.|..|.||||||||.||||||.|.||||||||
Sbjct  519  CCCAACCTGAAGTTGCGCTACAAACCCAAGAAATCCCTGGAGAGACGCAAGAATCCCCTGCTCAGGAAGGAGAG  592

Query  660  TGCGCCCCCCAGCCTCCGGCGGCGGCCCGCAGAGACCCTCGGAGACTCCTCCCCAAGTAGTAGCAGCACGCCCG  733
            |||.||.||||||||.|||.||.||||.||.||||||||.|||||.||||||||.||||||||||||||.||||
Sbjct  593  TGCCCCGCCCAGCCTTCGGAGGAGGCCTGCCGAGACCCTTGGAGATTCCTCCCCCAGTAGTAGCAGCACACCCG  666

Query  734  CATCAGGGTGCAGCTCCCCCAATGACAGCGAGCACGGCCCCAATCCCATCCTGGGCTCGGA-------------  794
            |.|||||||||||||||||.||||||||||||||.|||||.||.||...|||.|||||.||             
Sbjct  667  CGTCAGGGTGCAGCTCCCCTAATGACAGCGAGCATGGCCCTAACCCTGCCCTAGGCTCAGAGGCGCTCTTGGGC  740

Query  795  --------------------------------------------------------------------------  794
                                                                                      
Sbjct  741  CAGCGGCTGCGGCTGCAGGAGACTTCTCTGGCCCCGTTCGCTTTGCCGACAGTGTCCTTGCTGCCCGCAATCAC  814

Query  795  ------------------------GGCTGACAGTGACCGCAGGACCCATCCGACTCTGGGCCCTCGGGGGCCAA  844
                                    ||||||..|||||||||||||||||.|.|||.|.|||||||||||.||..
Sbjct  815  ACTGGGGCTGCCTGCCCCTGCCAGGGCTGATGGTGACCGCAGGACCCATTCAACTTTAGGCCCTCGGGGTCCTG  888

Query  845  TCCTGGGGAGCCCCCACACTCCCCTCTTCCTGCCCCATGGCTTGGAGCCCGAGGCTGGGGGCACCTTGCCCTCT  918
            |.|||||||.||||||..|||||||||||||||.|||.||..|||||||.|||||||||||||||||.||||||
Sbjct  889  TACTGGGGAACCCCCATGCTCCCCTCTTCCTGCACCACGGTCTGGAGCCAGAGGCTGGGGGCACCTTACCCTCT  962

Query  919  CGCCTGCAGCCCATTCTCCTCCTGGACCCCTCAGGCTCTCATGCCCCGCTGCTGACTGTGCCCGGGCTTGGGCC  992
            ||||||||.|||||||||||.|||||||||||||.||||||||||||.|||..|||||||||.||.||||||||
Sbjct  963  CGCCTGCAACCCATTCTCCTGCTGGACCCCTCAGTCTCTCATGCCCCACTGTGGACTGTGCCTGGCCTTGGGCC  1036

Query  993  CTTGCCCTTCCACTTTGCCCAGTCCTTAATGACCACCGAGCGGCTCTCTGGGTCAGGCCTCCACTGGCCACTGA  1066
            ||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||..|.|||||.|
Sbjct 1037  CTTGCCCTTCCACTTTGCCCAGCCCTTACTGACCACCGAGCGGCTCTCTGGGTCAGGCCTCCATCGACCACTTA  1110

Query 1067  GCCGGACTCGCTCAGAGCCCCTGCCCCCCAGTGCCACCGCTCCCCCACCGCCGGGCCCCATGCAGCCCCGCCTG  1140
            .||||||.|||||||||||||||||||||||.|||||.||..||||.|.||.||.||||.||||||||||||.|
Sbjct 1111  ACCGGACCCGCTCAGAGCCCCTGCCCCCCAGCGCCACAGCCTCCCCTCTGCTGGCCCCCCTGCAGCCCCGCCAG  1184

Query 1141  GAGCAGCTCAAAACTCACGTCCAGGTGATCA---------------------AGAGGTCAGCCAAGCCGAGTGA  1193
            ||.|.|||||||.|||||||||||.||||||                     |||||.|.||||||||.|||||
Sbjct 1185  GATCGGCTCAAACCTCACGTCCAGCTGATCAAGCCAGCCATCTCCCCTCCCCAGAGGCCTGCCAAGCCCAGTGA  1258

Query 1194  GAAGCCCCGGCTGCGGCAGATACCCTCGGCTGAAGACCTGGAGACAGATGGCGGGGGACCGGGCCAGGTGGTGG  1267
            |||||||||.|||||.|||||||||||||||||.|||||.|||||||||||.||||||..|||.|...|||.|.
Sbjct 1259  GAAGCCCCGACTGCGACAGATACCCTCGGCTGAGGACCTAGAGACAGATGGTGGGGGAGTGGGACCTATGGCGA  1332

Query 1268  ACGATGGCCTGGAGCACAGGGAGCTGGGCCATGGGCAGCCTGAGGCCAGAGGCCCCGCTCCTCTCCAGCAGCAC  1341
            |.|||||||||||.||.||||||...||||.|||||..|||||||.|||||||.||..|.||||.||||||||.
Sbjct 1333  ATGATGGCCTGGAACATAGGGAGTCAGGCCGTGGGCCTCCTGAGGGCAGAGGCTCCATTTCTCTGCAGCAGCAT  1406

Query 1342  CCTCAGGTGTTGCTCTGGGAACAGCAGCGACTGGCTGGGCGGCTCCCCCGGGGCAGCACCGGGGACACTGTGCT  1415
            |..||||||...|.||||||.|||||||..||.||.|||||||||.|.|.|||.|||.||||||||.|.|||||
Sbjct 1407  CAACAGGTGCCACCCTGGGAGCAGCAGCATCTAGCCGGGCGGCTCTCTCAGGGAAGCCCCGGGGACTCCGTGCT  1480

Query 1416  GCTTCCTCTGGCCCAGGGTGGGCACCGGCCTCTGTCCCGGGCTCAGTCTTCCCCAGCCGCACCTGCCTCACTG-  1488
            |.|.|||||||||||||.|||.||||||||.||||||.|..|.||||||||||||||.|||||||.|||.||| 
Sbjct 1481  GATACCTCTGGCCCAGGTTGGACACCGGCCCCTGTCCAGAACCCAGTCTTCCCCAGCAGCACCTGTCTCCCTGC  1554

Query 1489  TCAGCCCCAGAGCCTGCCAGCCAGGCCCGAGTCCTCTCCAGCTCAGAGACCCCTGCCAGGACCCTGCCCTTCAC  1562
            |.|| |||||||||..||.|.|||.|||.|||||||..||||||||||||.||||                  |
Sbjct 1555  TGAG-CCCAGAGCCCACCTGTCAGACCCAAGTCCTCAACAGCTCAGAGACACCTG------------------C  1609

Query 1563  CACAGGGCTGATCTATGACTCGGTCATGCTGAAGCACCAGTGCTCCTGCGGTGACAACAGCAGGCACCCGGAGC  1636
            .|||||||||.|||||||||||||.||||||||.|||||.||.|||||.||.||||||||||.|||.||.||||
Sbjct 1610  TACAGGGCTGGTCTATGACTCGGTGATGCTGAAACACCAATGTTCCTGTGGAGACAACAGCAAGCATCCCGAGC  1683

Query 1637  ACGCCGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAGCGGGGGCTCCGGAGCCAGTGTGAGTGTCTCCGA  1710
            |.||.|||||||||||||||||||||||||||||||||||.|||||.|||||.|||||||||||||||||||||
Sbjct 1684  ATGCAGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAACGGGGTCTCCGCAGCCAGTGTGAGTGTCTCCGA  1757

Query 1711  GGCCGGAAGGCCTCCCTGGAAGAGCTGCAGTCGGTCCACTCTGAGCGGCACGTGCTCCTCTACGGCACCAACCC  1784
            |||||.|||||.|||||.||.|||||||||||.|||||||||||.|||||||||||||||||||||||.|||||
Sbjct 1758  GGCCGAAAGGCTTCCCTAGAGGAGCTGCAGTCAGTCCACTCTGAACGGCACGTGCTCCTCTACGGCACGAACCC  1831

Query 1785  GCTCAGCCGCCTCAAACTGGACAACGGGAAGCTGGCAGGGCTCCTGGCACAGCGGATGTTTGTGATGCTGCCCT  1858
            .||||||||||||||||||||.|||||||||||..||||.||||||||||||||||.||||||||||||.||||
Sbjct 1832  ACTCAGCCGCCTCAAACTGGATAACGGGAAGCTTACAGGACTCCTGGCACAGCGGACGTTTGTGATGCTACCCT  1905

Query 1859  GTGGTGGGGTTGG-------------------------------------------------------------  1871
            ||||.||||||||                                                             
Sbjct 1906  GTGGCGGGGTTGGGCCTCTTGCGACTCTTTCTGCCTTCCTGGCCTCTCTCGGTCCGCCTCGCCCTTCCCATCTC  1979

Query 1872  --------------------------------------------------------------------------  1871
                                                                                      
Sbjct 1980  CCCATCATGCCCCCCGGCCCCTCCCTAGCCTTGAGGCCCAGGGACTGGGTTTGGGGGGCCTCCCAGCCTGGGCT  2053

Query 1872  --------------------------------------------------------------------------  1871
                                                                                      
Sbjct 2054  AGGGGCCCTGAGTGGAAGACAGTGGTGCAGACGGCCCCTCCAGCTCCGACCGTCCCGCGGGGCCTGAGCAGAGT  2127

Query 1872  -----------------------------------------------GGTGGACACTGACACCATCTGGAATGA  1898
                                                           |||.||.|||||||||||||||||.||
Sbjct 2128  CAGCTGGGGCTTAAAACCCCTCCCGGCCCAAACCCCAATCCCGCCCAGGTCGATACTGACACCATCTGGAACGA  2201

Query 1899  GCTTCATTCCTCCAATGCAGCCCGCTGGGCCGCTGGCAGTGTCACTGACCTCGCCTTCAAAGTGGCTTCTCGTG  1972
            |||.||||||||||||||||||||||||||.||.|||||||||||.|||||.|||||||||||.|||||.||.|
Sbjct 2202  GCTGCATTCCTCCAATGCAGCCCGCTGGGCTGCGGGCAGTGTCACCGACCTTGCCTTCAAAGTAGCTTCCCGAG  2275

Query 1973  AGCTAAAGAATGGTTTCGCTGTGGTGCGGCCCCCAGGACACCATGCAGATCATTCAACAGCCATGGGCTTCTGC  2046
            ||||.||||||||.||.|||||||||||.|||||.||||||||||||||||||||.||||||||||||||||||
Sbjct 2276  AGCTGAAGAATGGCTTTGCTGTGGTGCGACCCCCGGGACACCATGCAGATCATTCTACAGCCATGGGCTTCTGC  2349

Query 2047  TTCTTCAACTCAGTGGCCATCGCCTGCCGGCAGCTGCAACAGCAGAGCAAGGCCAGCAAGATCCTCATTGTAGA  2120
            |||||||||||.|||||||||||||||||.|||||.||.||.||..||||.||||||||||||||||||||.||
Sbjct 2350  TTCTTCAACTCCGTGGCCATCGCCTGCCGACAGCTACAGCAACACGGCAAAGCCAGCAAGATCCTCATTGTTGA  2423

Query 2121  CTGGGACGTGCACCATGGCAACGGCACCCAGCAAACCTTCTACCAAGACCCCAGTGTGCTCTACATCTCCCTGC  2194
            ||||||.||.|||||||||||||||||.|||||.||.||||||||.|||||||||||||               
Sbjct 2424  CTGGGATGTTCACCATGGCAACGGCACACAGCAGACTTTCTACCAGGACCCCAGTGTGC---------------  2482

Query 2195  ATCGCCATGACGACGGCAACTTCTTCCCGGGGAGTGGGGCTGTGGATGAGGTAGGGGCTGGCAGCGGTGAGGGC  2268
                                                                                      
Sbjct 2483  --------------------------------------------------------------------------  2482

Query 2269  TTCAATGTCAATGTGGCCTGGGCTGGAGGTCTGGACCCCCCCATGGGGGATCCTGAGTACCTGGCTGCTTTCAG  2342
                                                                                      
Sbjct 2483  --------------------------------------------------------------------------  2482

Query 2343  GATAGTCGTGATGCCCATCGCCCGAGAGTTCTCTCCAGACCTAGTCCTGGTGTCTGCTGGATTTGATGCTGCTG  2416
                                                                                      
Sbjct 2483  --------------------------------------------------------------------------  2482

Query 2417  AGGGTCACCCGGCCCCACTGGGTGGCTACCATGTTTCTGCCAAATGTTTTGGATACATGACGCAGCAACTGATG  2490
                                                                                      
Sbjct 2483  --------------------------------------------------------------------------  2482

Query 2491  AACCTGGCAGGAGGCGCAGTGGTGCTGGCCTTGGAGGGTGGCCATGACCTCACAGCCATCTGTGACGCCTCTGA  2564
                                                                                      
Sbjct 2483  --------------------------------------------------------------------------  2482

Query 2565  GGCCTGTGTGGCTGCTCTTCTGGGTAACAGGGTGGATCCCCTTTCAGAAGAAGGCTGGAAACAGAAACCCAACC  2638
                                                                                      
Sbjct 2483  --------------------------------------------------------------------------  2482

Query 2639  TCAATGCCATCCGCTCTCTGGAGGCCGTGATCCGGGTGCACAGTAAATACTGGGGCTGCATGCAGCGCCTGGCC  2712
                                                                                      
Sbjct 2483  --------------------------------------------------------------------------  2482

Query 2713  TCCTGTCCAGACTCCTGGGTGCCTAGAGTGCCAGGGGCTGACAAAGAAGAAGTGGAGGCAGTGACCGCACTGGC  2786
                                                                                      
Sbjct 2483  --------------------------------------------------------------------------  2482

Query 2787  GTCCCTCTCTGTGGGCATCCTGGCTGAAGATAGGCCCTCGGAGCAGCTGGTGGAGGAGGAAGAACCTATGAATC  2860
                                                                                      
Sbjct 2483  --------------------------------------------------------------------------  2482

Query 2861  TC  2862
              
Sbjct 2483  --  2482

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