Nucleotide Global Alignment
Description
- Query:
- TRCN0000489338
- Subject:
- NR_136584.2
- Aligned Length:
- 5814
- Identities:
- 1143
- Gaps:
- 4670
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTACTCAGCCGAGCGGCCGAGGCCGGACGACGCGGCTTGGATTGCGGAGCCGCGAGCAGCGCTGGGTAACGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCGGCGACCACCCCGGACGGCCCCTGTCCCCGCTGGCGGGCTTCCCTGTCGCCGTTCGCTGCGCTGCCGGCTT 148
Query 1 ----------------------------------------------ATGAGCAGAAGCAAGCGTGACAACAATT 28
||||||||||||||||||||||||||||
Sbjct 149 CTTGGTGAATTTTTGGATGAAGCCATTAAATTAATTGCTTGCCATCATGAGCAGAAGCAAGCGTGACAACAATT 222
Query 29 TTTATAGTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACGATATCAGAATTTAAAACCTATAGGCTCA 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTTATAGTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACGATATCAGAATTTAAAACCTATAGGCTCA 296
Query 103 GGAGCTCAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAAGAAATGTTGCAATCAAGAAGCTAAGCCG 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAGCTCAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAAGAAATGTTGCAATCAAGAAGCTAAGCCG 370
Query 177 ACCATTTCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTAGTTCTTATGAAATGTGTTAATCACAAAA 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACCATTTCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTAGTTCTTATGAAATGTGTTAATCACAAAA 444
Query 251 ATATAATTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGAAGAATTTCAAGATGTTTACATAGTCATG 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATATAATTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGAAGAATTTCAAGATGTTTACATAGTCATG 518
Query 325 GAGCTCATGGATGCAAATCTTTGCCAAGTGATTCAGATGGAGCTAGATCATGAAAGAATGTCCTACCTTCTCTA 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGCTCATGGATGCAAATCTTTGCCAAGTGATTCAGATGGAGCTAGATCATGAAAGAATGTCCTACCTTCTCTA 592
Query 399 TCAGATGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTATTCATCGGGACTTAAAGCCCAGTAATATAG 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAGATGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTATTCATCGGGACTTAAAGCCCAGTAATATAG 666
Query 473 TAGTAAAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGGCCAGGACTGCAGGAACGAGTTTTATGATG 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TAGTAAAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGGCCAGGACTGCAGGAACGAGTTTTATGATG 740
Query 547 ACGCCTTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATCCTTGGCATGGGCTACAAGGAAAACGTGGA 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACGCCTTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATCCTTGGCATGGGCTACAAGGAAAACGTGGA 814
Query 621 TTTATGGTCTGTGGGGTGCATTATGGGAGAAATGGTTTGCCACAAAATCCTCTTTCCAGGAAGGGACTATATTG 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTTATGGTCTGTGGGGTGCATTATGGGAGAAATGGTTTGCCACAAAATCCTCTTTCCAGGAAGGGACTATATTG 888
Query 695 ATCAGTGGAATAAAGTTATTGAACAGCTTGGAACACCATGTCCTGAATTCATGAAGAAACTGCAACCAACAGTA 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCAGTGGAATAAAGTTATTGAACAGCTTGGAACACCATGTCCTGAATTCATGAAGAAACTGCAACCAACAGTA 962
Query 769 AGGACTTACGTTGAAAACAGACCTAAATATGCTGGATATAGCTTTGAGAAACTCTTCCCTGATGTCCTTTTCCC 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGGACTTACGTTGAAAACAGACCTAAATATGCTGGATATAGCTTTGAGAAACTCTTCCCTGATGTCCTTTTCCC 1036
Query 843 AGCTGACTCAGAACACAACAAACTTAAAGCCAGTCAGGCAAGGGATTTGTTATCCAAAATGCTGGTAATAGATG 916
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGCTGACTCAGAACACAACAAACTTAA----AGTCAGGCAAGGGATTTGTTATCCAAAATGCTGGTAATAGATG 1106
Query 917 CATCTAAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACATCAATGTCTGGTATGATCCTTCTGAAGCA 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 CATCTAAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACATCAATGTCTGGTATGATCCTTCTGAAGCA 1180
Query 991 GAAGCTCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGGGAACACACAATAGAAGAGTGGAAAGAATT 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 GAAGCTCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGGGAACACACAATAGAAGAGTGGAAAGAATT 1254
Query 1065 GATATATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGGAGTTATACGGGGGCAGCCCTCTCCTTTAG 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 GATATATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGGAGTTATACGGGGGCAGCCCTCTCCTTT-- 1326
Query 1139 CACAGGTGCAGCAGG----------------------------------------------------------- 1153
|||||||||||.
Sbjct 1327 ---AGGTGCAGCAGTGATCAATGGCTCTCAGCATCCATCATCATCGTCGTCTGTCAATGATGTGTCTTCAATGT 1397
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 1398 CAACAGATCCGACTTTGGCCTCTGATACAGACAGCAGTCTAGAAGCAGCAGCTGGGCCTCTGGGCTGCTGTAGA 1471
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 1472 TGACTACTTGGGCCATCGGGGGGTGGGAGGGATGGGGAGTCGGTTAGTCATTGATAGAACTACTTTGAAAACAA 1545
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 1546 TTCAGTGGTCTTATTTTTGGGTGATTTTTCAAAAAATGTAGAATTCATTTTGTAGTAAAGTAGTTTATTTTTTT 1619
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 1620 TAATTTCAAGTGATGTAATTTAAAACCTAAGTTGTGTTTCAAAACAGCAACAAAACTGTATTGTATTTTTTTTG 1693
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 1694 CTGTAATTAACTGTATAATGTAAACCTAATTATTTTATCATGGTTTAAATTTTTTGCATATTTGCTTTATCTTA 1767
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 1768 TGCTGCTGATTTTTTTAACTGAATTTGTAAGATTTTGTTTATCAAAGCAACTATTATGTGGTGACTTGCCTATA 1841
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 1842 TCATGAATTATTTAAGATTTTTATAGTTTTTTTTAATTAGAATTTATTTCAGATGTTTTGTTCATGATACTATC 1915
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 1916 CTTCAGGGTTATGTGCTTATCAATGAAATAACCCCAGAGGAGTGAGGGAAAATAACTTGTAGCCAGTTATATTC 1989
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 1990 AGGAATAACTACTGTAAATGATGAACGTGTTAGGAGACCTCCAATATTTGCTACTTGCCAATCCTAATTTAGTT 2063
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2064 ACAAGAATTGGTAGGCAATCCTACTTAATTTTGGCAAAAGCCCCGTCATCTAAATGGCAGAATAACTCAGAGCA 2137
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2138 TGTCTTTGAAGATGCTGGGCGTCTACCACCACCTTATGTCCCCACCCTACCCAACAAAAATAAGTAAAAAGAAT 2211
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2212 ATGGTGTATTCTACAAATTTGTGGCATGCTCAAAGTTTATGATCACATAAAGGCAAGAGGATACTTCATGAATA 2285
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2286 ATACATTTCAATGCAAATAAACAGATGGTTCACTTCTACTAGCTATGAGCCTGTTTTTGTATACACTGAGTTAA 2359
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2360 TCTACTCAGGCTGTAGGTCCCAGCAATGTTCTAGAGTCTGGTCTTTCCCTTTCCTGCAGCTTCGGGTCCTTGGA 2433
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2434 CCTTTCCTGTTTCCTATTACTTGGAGTGTCTGTCAGTTGAGCACCAGTTGTTCTGGTGTTTCATTTGATTCTAC 2507
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2508 TTGTAGCATAATCATTTATACGAGCTATTGGGAGGTTCCAAACCCTACCTAGATTTGTGTAGGTGATGTATCAA 2581
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2582 ATGAGCAATATACCGTTCATCTGAAAATAGTAGCACACAGCCATATATAGGATATCATTTTCTAAGGACTGTTT 2655
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2656 CTTCACATTGAGCAGAGCAGGCATAAATGGTGGTTATTTAGTCTAAGTCTTTTATTTTTTTATACCTGATTTTC 2729
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2730 AACATAACACGCAATGTGGATGTCGAGTAGTGTTAAGAATGGTGCTGCTCCTGACAAGTGTATGTTAACTGTTT 2803
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2804 ACATTTTCTATCTGTAGAATTATTTCTCTATTACTGAACTTTTCCTAAGTAAAATGTCTTTGAAGTCTCGTTAT 2877
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2878 TTCTGAAATACGTTGTCTGTAATAGACCCAGGCACCTTTTAAATTATCTCTGGAACAAGAGGGATTTCATGTAA 2951
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 2952 TGAACTAGGAAATGCATACTCACATAAGCAACAAGGTTCTAGGCAGAAAGCCCCTTGGAATTTGTGACCAACAG 3025
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3026 GAGCAAGAACAGGTGCGGCTCAACATGCAATGTCTGAAAATTTGCTTGGCATTTTATTCATATATTTAGTGCAA 3099
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3100 AATTATTTTTGAGTGAGATATTTTACATCACTGTTAATGTGCAATATTTAAGATTAAAATACATTAGCTTTTTT 3173
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3174 ATATACTTTGAAGTAGCAAGTTTGTTTTCGATGGCTTAGAGTCATGATTTCCAGCTTCCCAGCCTTTTTATCAG 3247
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3248 TCCCTTTTCTAATACAACAAGGTGCATTAATTTGATTAGGCAAATTAGAGTTCTAAGACACTTCTTGAATTGTA 3321
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3322 GACAGAAAATATTGGATTCACAATTTCAGCAGAAATTTGAGAATGAGTGTGTTTATATTAATTTCACAATTAGC 3395
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3396 TGTATTTTCTGTAGCATAGATTATGTCACTGTTGCACTTTCACAGCAGACATGCTTTCAGAAGGTTCTCATATT 3469
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3470 TTATGTTTGATTGCTGATAAGCCATCTCTATTGATACAGATTTTGGTTAAGTAAGGAAAACCAGGTGTGTGTCT 3543
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3544 GTATCATTTATTGTAAATGCCAGCTGCCACTTGCCAACCATCATGTTCAGTTCAATTCAAAGAAAACAAACTCT 3617
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3618 CATTACTTAGTGTAAACTAAAATACTTAACAAATTATATCCTAAAAACAAGGTCTCTTTGTTAAATGTTGCATG 3691
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3692 CCCTAGGTTTTAAATTACTACATCCAAATACAGTTTTCGTCTTAAATTTGTTAAGCTAAATATATGTTGGTTCT 3765
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3766 TTTTATTTTGGAATCCTTTAAGCATCTTAAACATTTTTTTTTTGAAGAGAAGTTACAAATAACATTTCTATCAG 3839
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3840 GTAGTACTTGTATGAAACCACCTTTCTTATTCTATAATTTTGATTTTTCAATTTTATATACTTAATATACTCAC 3913
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3914 TGTCTTACTATCAGAAAGTTATTTTGACCAAGATTTTTATTATCTTCATAGATTCAGAAAGAGATGCTAATTCT 3987
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 3988 GTACCAATGTCTTCCTGGTTACTATTCTCTTCCCTCTAATATATACTGGCCATTTGTAAAACCATTGTGTTGTT 4061
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4062 GGGATCACTTAGTTATACTATACGCAGATAGAGCATCTCAACTCTGTCATAGTGTTTGCTGAACAGTTTTCAGT 4135
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4136 GTCATGCACCTTTGGCTGCTAATTGTTCCTGACGTGCACTCTTCCGAGTTGGTAAAGGCACAGTGTGTTCATGC 4209
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4210 CAGACTTCTAAGAGAAACACCAGCCTCTTAAATCAGAAGCCTACACACAACCCCCTTAACAATCCAAAGAAGCT 4283
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4284 TGATGGTGTGCAAAGAAGCATCCTGCCAGCCTTGTCATTGTTCTGTTCTATGCTAATCCTGCTGTGTTGTCTAA 4357
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4358 AAGATGGAGGGAAGAGGACATCAGTGTCTGATAGTGAAATCATCAGCAGGAAAGTGAAGCTCTTTCCTTGGTTA 4431
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4432 CAGATAAGACTTGGTTTACACTATTGGCCAGTATCTGCTAAACATATGAAGACTTAACTATTCAGTGTTGCCTA 4505
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4506 GGCATTCGCCTGCACAACATTTTGAGGTTAGAACATAGAATATTTTCAGAAATACTGTTGTAGTTTGTGAGTGT 4579
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4580 TGTTCATTAGTTACACATTAGCTATAGAGTGGATGCATGAAGCCCCATGACACCAGTAAACTTCTCTTACCAGT 4653
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4654 AGGTAAACCAAACACCATTCTGTCATTAGCAGCCCTCTTAAATGTTGCCTCTCCGTATCCTGTTGCATTTTTGT 4727
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4728 GTGCATTGTGTTTCTACTGATCTCTCTTAGGTTTTTACGGAATCAAAGGAAACTAATTTTTCCTTAATAGCAAG 4801
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4802 AAAGATGAAGAGGTAAAGGGCATTGAAGCAGAAATGTATAGTTTGGGGTACGATTAGAAAACTCGTAAGGAAAA 4875
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4876 CAGAAGTCCTAATTTCAAACTGACTGCTCTTCGTTAAGTGCTCTTAAGGAGAGTCTAGTAACAGTAACACTTTC 4949
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 4950 TGGCCATTTCTAGTTTAGATTCTCTTCGTTACTGAAACTTTTGAGAAATATTACCTGTGGATTAATTTTGCACA 5023
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 5024 ATGTTCTATTCTCATAATGACTTACAAATTAAACTAGGTTTTTATTGAACTACCTCACACTAATTTTCTATGCT 5097
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 5098 TTCCCAAGTAAGCTGTTGCCCTGTTAGATCTTTACTGAGTGAATTATAAATGTGTGTTAAATACTTTCTAGCCA 5171
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 5172 ATGTTGACACAATACCAGTAAGTATGTAAAGTATATACCTTACATCAGTAAGAGACACGTGTAAAATCTTTGAC 5245
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 5246 TGTATGTCTTGCAAAATTGTGCTCGTTGACATTATTACTGTTTTTGTAAGTAGAAACCTGCTCGTGATATCGGT 5319
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 5320 CCATTTACATTTTACAAAAGGAGTAAATCTTAGTAAAAATTTTACGAAGAAATAAATTACTTTTGTAGGCCCAA 5393
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 5394 TATTTGGTATATTTTTGAGAAGCTGTTAATCTTTTAGCTGAATAATGAAGTTAGACTGAATTACGTGTCTCCCT 5467
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 5468 GGACTGTGACATCTATTTTCTCATTACAGTTTATCCTGGTCAGCAGGGTGTCACACCTGGAAACCTGAGTATGA 5541
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 5542 TAGCTGACATTTGCTTTTCTCCCTCTGCGATGTCATTCCTCCTCCATTCCTCTCCTTCCCTGTGTTCCGTTCCC 5615
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 5616 TCTCCTTTCCTCTAGACAAAACAAAATGGGGCACTTTTTAGGGAATGCTGAGATCATTATTGTGGTTTTTCATC 5689
Query 1154 -------------------------------------------------------------------------- 1153
Sbjct 5690 ATTCATGCCCTAGTCATTAAACATGCACCACTGGAATGTAAACAATGTTATCTAGTATGTCAATTGGTTATAAT 5763
Query 1154 ------------------------------------------ 1153
Sbjct 5764 ATTTTAAATAAAAAAGAAAAAAGTGGTATGAAAATTATGAAA 5805