Nucleotide Global Alignment

Description

Query:
TRCN0000489458
Subject:
XM_011521391.2
Aligned Length:
2257
Identities:
1943
Gaps:
303

Alignment

Query    1  ATGCCACGCAATTCTGGAGCTGGATACGGCTGCCCACACGGGGACCCCAGCATGCTGGACAGCAGAGAGACCCC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ACAGGAGAGCCGGCAGGACATGATTGTGAGGACCACCCAAGAAAAATTGAAAACCAGCTCACTGACTGACAGGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AGCCACTCTCCAAAGAGTCCCTGAACCATGCTCTCGAGCTCTCAGTGCCA---GAGAAGGTGAATAATGCCCAG  219
                                                             |   ||| |||.||  |||      
Sbjct    1  -------------------------------------------------ATGGGAG-AGGAGA--AAT------  16

Query  220  TGGGATGCTCCAGAGGAGGCGCTGTGGACGACTCGGGCCGATGGGCGGGTGCGCCTGCGCATAGACCCCAGCTG  293
                      .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   17  ----------TAGAGGAGGCGCTGTGGACGACTCGGGCCGATGGGCGGGTGCGCCTGCGCATAGACCCCAGCTG  80

Query  294  CCCACAGCTTCCCTACACTGTGCATCGGATGTTCTACGAGGCCCTGGATAAGTATGGGGACCTCATCGCTTTGG  367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   81  CCCACAGCTTCCCTACACTGTGCATCGGATGTTCTACGAGGCCCTGGATAAGTATGGGGACCTCATCGCTTTGG  154

Query  368  GCTTCAAGCGCCAGGACAAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAG  441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  155  GCTTCAAGCGCCAGGACAAGTGGGAACACATCTCCTACTCCCAATACTACCTGCTCGCCCGCAGAGCCGCCAAG  228

Query  442  GGCTTCCTGAAGCTCGGCCTGAAGCAGGCCCACAGTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTGGTTCTT  515
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  229  GGCTTCCTGAAGCTCGGCCTGAAGCAGGCCCACAGTGTGGCCATCCTCGGCTTCAACTCCCCGGAGTGGTTCTT  302

Query  516  CTCGGCAGTGGGCACAGTATTTGCAGGTGGCATCGTCACTGGCATCTACACCACCAGCTCCCCAGAGGCCTGCC  589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  303  CTCGGCAGTGGGCACAGTATTTGCAGGTGGCATCGTCACTGGCATCTACACCACCAGCTCCCCAGAGGCCTGCC  376

Query  590  AGTACATCGCTTATGACTGCTGCGCCAATGTCATCATGGTCGACACGCAGAAGCAGCTGGAAAAGATCCTGAAG  663
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  377  AGTACATCGCTTATGACTGCTGCGCCAATGTCATCATGGTCGACACGCAGAAGCAGCTGGAAAAGATCCTGAAG  450

Query  664  ATCTGGAAACAGTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGATGGCCAATGT  737
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  451  ATCTGGAAACAGTTGCCACATCTAAAGGCAGTCGTGATATATAAAGAACCTCCTCCAAACAAGATGGCCAATGT  524

Query  738  GTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGTGCCTGAGGAAGCCCTGGACGCCATCATTGACACCC  811
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  525  GTACACGATGGAGGAATTCATGGAGCTGGGGAATGAAGTGCCTGAGGAAGCCCTGGACGCCATCATTGACACCC  598

Query  812  AGCAGCCCAACCAGTGCTGTGTGCTAGTCTACACTTCCGGCACCACTGGGAACCCCAAGGGCGTGATGCTGAGT  885
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  599  AGCAGCCCAACCAGTGCTGTGTGCTAGTCTACACTTCCGGCACCACTGGGAACCCCAAGGGCGTGATGCTGAGT  672

Query  886  CAAGACAATATCACGTGGACGGCACGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGA  959
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  673  CAAGACAATATCACGTGGACGGCACGGTACGGCAGCCAGGCCGGTGACATCCGGCCGGCAGAAGTCCAGCAGGA  746

Query  960  GGTGGTAGTCAGCTACCTGCCCCTCAGCCATATTGCCGCCCAGATCTACGACCTGTGGACAGGCATCCAGTGGG  1033
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  747  GGTGGTAGTCAGCTACCTGCCCCTCAGCCATATTGCCGCCCAGATCTACGACCTGTGGACAGGCATCCAGTGGG  820

Query 1034  GGGCCCAGGTTTGCTTTGCCGAACCCGACGCCCTGAAGGGGAGCCTGGTGAACACGCTGCGGGAGGTGGAGCCC  1107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  821  GGGCCCAGGTTTGCTTTGCCGAACCCGACGCCCTGAAGGGGAGCCTGGTGAACACGCTGCGGGAGGTGGAGCCC  894

Query 1108  ACATCACACATGGGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTGGCGGCTCAGTCTGG  1181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  895  ACATCACACATGGGGGTGCCCCGGGTATGGGAGAAGATCATGGAGCGCATCCAGGAGGTGGCGGCTCAGTCTGG  968

Query 1182  CTTCATCCGGCGAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGGAGCAGAACCTCACCTGCCCCGGCAGCG  1255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  969  CTTCATCCGGCGAAAGATGCTGCTGTGGGCCATGTCGGTGACCTTGGAGCAGAACCTCACCTGCCCCGGCAGCG  1042

Query 1256  ACCTGAAGCCCTTCACAACCAGACTGGCAGATTACCTGGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGCC  1329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1043  ACCTGAAGCCCTTCACAACCAGACTGGCAGATTACCTGGTGCTAGCCAAGGTTCGCCAGGCACTGGGATTTGCC  1116

Query 1330  AAGTGTCAAAAGAACTTCTATGGAGCGGCCCCCATGATGGCAGAGACACAGCACTTCTTCCTGGGTCTCAACAT  1403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1117  AAGTGTCAAAAGAACTTCTATGGAGCGGCCCCCATGATGGCAGAGACACAGCACTTCTTCCTGGGTCTCAACAT  1190

Query 1404  CCGCTTGTATGCGGGCTACGGCCTCAGTGAGACCTCAGGCCCCCACTTCATGTCCAGTCCCTACAACTACAGGC  1477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 1191  CCGCTTGTATGCGGGCTACGGCCTCAGTGAGACCTCAGGCCCCCACTTCATGTCCAGTCCCTACAACTACCGGC  1264

Query 1478  TGTACAGCTCAGGCAAGTTGGTGCCCGGCTGTCGGGTGAAGCTGGTGAACCAGGACGCAGAGGGCATTGGCGAG  1551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1265  TGTACAGCTCAGGCAAGTTGGTGCCCGGCTGTCGGGTGAAGCTGGTGAACCAGGACGCAGAGGGCATTGGCGAG  1338

Query 1552  ATCTGCCTGTGGGGCCGCACCATATTCATGGGCTACCTGAACATGGAGGACAAGACTTGTGAGGCCATCGACGA  1625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1339  ATCTGCCTGTGGGGCCGCACCATATTCATGGGCTACCTGAACATGGAGGACAAGACTTGTGAGGCCATCGACGA  1412

Query 1626  GGAAGGCTGGCTGCACACGGGTGATGCTGGCCGCCTGGACGCCGATGGCTTCCTCTACATCACTGGGCGCCTCA  1699
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1413  GGAAGGCTGGCTGCACACGGGTGATGCTGGCCGCCTGGACGCCGATGGCTTCCTCTACATCACTGGGCGCCTCA  1486

Query 1700  AAGAATTAATCATCACAGCTGGTGGGGAGAATGTGCCCCCTGTGCCCATCGAGGAGGCCGTGAAGATGGAGCTG  1773
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1487  AAGAATTAATCATCACAGCTGGTGGGGAGAATGTGCCCCCTGTGCCCATCGAGGAGGCCGTGAAGATGGAGCTG  1560

Query 1774  CCCATCATCAGCAACGCCATGCTCATTGGGGACCAGAGGAAGTTCCTGTCCATGCTGCTCACCTTGAAGTGCAC  1847
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1561  CCCATCATCAGCAACGCCATGCTCATTGGGGACCAGAGGAAGTTCCTGTCCATGCTGCTCACCTTGAAGTGCAC  1634

Query 1848  TCTGGACCCAGACACCTCTGACCAGACTGATAATCTGACTGAACAAGCTATGGAGTTCTGCCAGAGGGTGGGCA  1921
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1635  TCTGGACCCAGACACCTCTGACCAGACTGATAATCTGACTGAACAAGCTATGGAGTTCTGCCAGAGGGTGGGCA  1708

Query 1922  GCAGAGCCACCACAGTGTCCGAGATCATAGAGAAGAAGGATGAGGCCGTGTACCAGGCCATCGAAGAGGGGATC  1995
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1709  GCAGAGCCACCACAGTGTCCGAGATCATAGAGAAGAAGGATGAGGCCGTGTACCAGGCCATCGAAGAGGGGATC  1782

Query 1996  CGGAGGGTCAACATGAACGCGGCGGCCCGGCCCTACCACATCCAGAAGTGGGCCATTCTCGAGAGAGACTTCTC  2069
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1783  CGGAGGGTCAACATGAACGCGGCGGCCCGGCCCTACCACATCCAGAAGTGGGCCATTCTCGAGAGAGACTTCTC  1856

Query 2070  CATTTCGGGTGGAGAGTTGGGTCCCACGATGAAACTGAAACGGCTCACAGTTTTGGAGAAGTACAAAG-----G  2138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |
Sbjct 1857  CATTTCGGGTGGAGAGTTGGGTCCCACGATGAAACTGAAACGGCTCACAGTTTTGGAGAAGTACAAAGATGGAG  1930

Query 2139  TATCATTGACTCCTTTTACCA------AGAGCAAAAAATGT-------------------AAAAGCT-------  2180
            |.||    ||||..||..|||      ||.|||      ||                   |.||.||       
Sbjct 1931  TCTC----ACTCTGTTGCCCAGGCTGGAGTGCA------GTGGCACGATCCCAGCTCACCACAACCTCTGCCTC  1994

Query 2181  -------------------------------------  2180
                                                 
Sbjct 1995  CTGGGTTCAAGCGATTCTCCTGCCTCAGCGTCCTGAA  2031

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