Nucleotide Global Alignment

Description

Query:
TRCN0000489540
Subject:
XM_011510945.2
Aligned Length:
2136
Identities:
1872
Gaps:
261

Alignment

Query    1  ATGAACGCGGCGGTGGTGAGGCGGACGCAGGAGGCGCTGGGGAAAGTGATTCGGAGGCCGCCGCTGACAGAGAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct    1  ATGAACGCGGCGGTGGTGAGGCGGACGCAGGAGGCGCTGGGGAAAGTGATTCGGAGGCCGCCGCTGACCGAGAA  74

Query   75  GCTGCTGAGCAAGCCCCCGTTCCGCTACCTGCACGACATCATCACGGAGGTGATTAGAATGACTGGTTTCATGA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GCTGCTGAGCAAGCCCCCGTTCCGCTACCTGCACGACATCATCACGGAGGTGATTAGAATGACTGGTTTCATGA  148

Query  149  AGGGCCTCTACACAGACGCCGAGATGAAGTCTGATAATGTGAAGGATAAAGATGCAAAAATTAGCTTCCTACAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGGGCCTCTACACAGACGCCGAGATGAAGTCTGATAATGTGAAGGATAAAGATGCAAAAATTAGCTTCCTACAA  222

Query  223  AAGGCCATAGACGTGGTTGTAATGGTGTCGGGAGAGCCACTGTTGGCCAAACCAGCCCGAATCGTGGCGGGGCA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAGGCCATAGACGTGGTTGTAATGGTGTCGGGAGAGCCACTGTTGGCCAAACCAGCCCGAATCGTGGCGGGGCA  296

Query  297  TGAGCCTGAAAGAACAAACGAGCTGCTCCAGATAATTGGAAAATGCTGTCTCAACAAGCTCTCTAGTGACGATG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGAGCCTGAAAGAACAAACGAGCTGCTCCAGATAATTGGAAAATGCTGTCTCAACAAGCTCTCTAGTGACGATG  370

Query  371  CGGTGCGGAGGGTTTTAGCTGGAGAGAAGGGAGAAGTGAAAGGCCGGGCCTCACTGACCTCAAGATCTCAGGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CGGTGCGGAGGGTTTTAGCTGGAGAGAAGGGAGAAGTGAAAGGCCGGGCCTCACTGACCTCAAGATCTCAGGAA  444

Query  445  TTGGATAATAAGAATGTGCGAGAAGAAGAGTCCAGAGTTCACAAAAATACAGAGGATAGAGGAGACGCTGAAAT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTGGATAATAAGAATGTGCGAGAAGAAGAGTCCAGAGTTCACAAAAATACAGAGGATAGAGGAGACGCTGAAAT  518

Query  519  AAAAGAGAGAAGTACAAGCAGAGATCGAAAACAGAAGGAAGAATTGAAAGAAGACCGCAAGCCAAGAGAAAAGG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAAAGAGAGAAGTACAAGCAGAGATCGAAAACAGAAGGAAGAATTGAAAGAAGACCGCAAGCCAAGAGAAAAGG  592

Query  593  ACAAGGACAAGGAGAAGGCCAAGGAGAATGGCGGAAACAGACACAGAGAAGGGGAGAGAGAGAGAGCCAAAGCC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACAAGGACAAGGAGAAGGCCAAGGAGAATGGCGGAAACAGACACAGAGAAGGGGAGAGAGAGAGAGCCAAAGCC  666

Query  667  CGGGCCAGGCCAGACAGCGAGCGACAGAAAGACAGAGGCAACAGGGAGCGGGACAGAGACTCCGAGCGCAAGAA  740
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CGGGCCAGGCCAGACAACGAGCGACAGAAAGACAGAGGCAACAGGGAGCGGGACAGAGACTCCGAGCGCAAGAA  740

Query  741  GGAGACAGAGAGAAAGAGTGAGGGGGGGAAAGAGAAGGAGAGACTGAGAGACAGGGACCGAGAGCGCGACCGGG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGAGACAGAGAGAAAGAGTGAGGGGGGGAAAGAGAAGGAGAGACTGAGAGACAGGGACCGAGAGCGCGACCGGG  814

Query  815  ACAAAGGGAAGGACAGGGACAGACGGAGAGTGAAAAACGGGGAGCACTCCTGGGACCTGGACAGGGAGAAGAAC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ACAAAGGGAAGGACAGGGACAGACGGAGAGTGAAAAACGGGGAGCACTCCTGGGACCTGGACAGGGAGAAGAAC  888

Query  889  AGAGAGCATGACAAACCCGAGAAAAAGTCAGCAAGCTCAGGGGAGATGTCTAAAAAGTTATCAGATGGAACTTT  962
            |||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGAGAGCATGACAAACCTGAGAAAAAGTCAGCAAGCTCAGGGGAGATGTCTAAAAAGTTATCAGATGGAACTTT  962

Query  963  TAAAGACTCCAAGGCTGAAACAGAGACTGAGATTTCCACTAGAGCTTCCAAGTCATTGACAACAAAAACATCAA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TAAAGACTCCAAGGCTGAAACAGAGACTGAGATTTCCACTAGAGCTTCCAAGTCATTGACAACAAAAACATCAA  1036

Query 1037  AACGGCGATCCAAAAATTCAGTGG--------------------------------------------------  1060
            ||||||||||||||||||||||||                                                  
Sbjct 1037  AACGGCGATCCAAAAATTCAGTGGAAGGAAGAAGGGACCCTAAAACCAGTGAAAATAGTCTTTCCCCTGAAAAG  1110

Query 1061  --------------------------------------------------------------------------  1060
                                                                                      
Sbjct 1111  GAACATAACTTTTCCTACTGTAAAGCTAAGAAGGAACATAGCATGAAACAGCTTGGAAGGAAGGAGGATAATAT  1184

Query 1061  --------------------------------------------------------------------------  1060
                                                                                      
Sbjct 1185  TTCAGCTAAAAGTTTAGACTCCATAGTGTCTGGAATAAATAATGAGCCAAATCAGGAAACGACAACATCAGAAA  1258

Query 1061  ---------------------------------------------------------------AAGGTGACTCC  1071
                                                                           |||||||||||
Sbjct 1259  TAGATGATAATTCAGCTAGTCTGCGGTGTGAGAATATTCAGCCCAACCCCACAGAGAAGCAGAAAGGTGACTCC  1332

Query 1072  ACCAGTGATGCAGAAGGAGATGCTGGACCTGCTGGCCAAGATAAGTCTGAGGTGCCAGAGACTCCAGAAATTCC  1145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ACCAGTGATGCAGAAGGAGATGCTGGACCTGCTGGCCAAGATAAGTCTGAGGTGCCAGAGACTCCAGAAATTCC  1406

Query 1146  TAATGAGCTTTCATCCAACATCAGAAGAATTCCTCGGCCTGGGAGTGCAAGACCAGCCCCTCCCCGGGTCAAAC  1219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TAATGAGCTTTCATCCAACATCAGAAGAATTCCTCGGCCTGGGAGTGCAAGACCAGCCCCTCCCCGGGTCAAAC  1480

Query 1220  GGCAAGACAGCATGGAGGCGCTACAAATGGATAGGTCAGGGAGTGGTAAAACCGTTTCAAATGTGATTACAGAG  1293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GGCAAGACAGCATGGAGGCGCTACAAATGGATAGGTCAGGGAGTGGTAAAACCGTTTCAAATGTGATTACAGAG  1554

Query 1294  TCACACAATTCTGACAATGAAGAGGATGATCAATTTGTGGTGGAAGCTGCCCCTCAGCTCTCTGAAATGTCAGA  1367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TCACACAATTCTGACAATGAAGAGGATGATCAATTTGTGGTGGAAGCTGCCCCTCAGCTCTCTGAAATGTCAGA  1628

Query 1368  AATTGAAATGGTAACAGCAGTGGAACTAGAAGAAGAGGAGAAGCATGGTGGACTTGTGAAAAAAATTTTGGAGA  1441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AATTGAAATGGTAACAGCAGTGGAACTAGAAGAAGAGGAGAAGCATGGTGGACTTGTGAAAAAAATTTTGGAGA  1702

Query 1442  CGAAGAAAGATTATGAGAAATTGCAGCAGTCACCCAAACCTGGGGAGAAGGAGCGATCTCTCTTTGAGTCGGCA  1515
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CGAAGAAAGATTATGAGAAATTGCAGCAGTCACCCAAACCTGGGGAGAAGGAGCGATCTCTCTTTGAGTCGGCA  1776

Query 1516  TGGAAGAAGGAGAAGGACATCGTTTCCAAGGAGATAGAGAAGCTCCGCACGTCCATCCAGACCCTGTGCAAGAG  1589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TGGAAGAAGGAGAAGGACATCGTTTCCAAGGAGATAGAGAAGCTCCGCACGTCCATCCAGACCCTGTGCAAGAG  1850

Query 1590  CGCACTTCCCCTGGGGAAGATCATGGACTACATCCAGGAAGACGTGGATGCCATGCAGAATGAGCTGCAGATGT  1663
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CGCACTTCCCCTGGGGAAGATCATGGACTACATCCAGGAAGACGTGGATGCCATGCAGAATGAGCTGCAGATGT  1924

Query 1664  GGCACAGCGAGAACAGGCAGCACGCCGAGGCCCTGCAGCAGGAGCAGAGGATCACAGACTGTGCCGTGGAGCCC  1737
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  GGCACAGCGAGAACAGGCAGCACGCCGAGGCCCTGCAGCAGGAGCAGAGGATCACAGACTGTGCCGTGGAGCCC  1998

Query 1738  TTAAAGGCTGAGCTCGCGGAGCTGGAGCAGCTGATCAAAGACCAGCAAGACAAGATCTGTGCTGTGAAGGCCAA  1811
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TTAAAGGCTGAGCTCGCGGAGCTGGAGCAGCTGATCAAAGACCAGCAAGACAAGATCTGTGCTGTGAAGGCCAA  2072

Query 1812  CATCCTCAAGAATGAAGAAAAAATCCAGAAAATGGTATATAGTATCAATTTGACTTCGAGAAGG  1875
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  CATCCTCAAGAATGAAGAAAAAATCCAGAAAATGGTATATAGTATCAATTTGACTTCGAGAAGG  2136

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