Nucleotide Global Alignment

Description

Query:
TRCN0000489540
Subject:
XR_922902.2
Aligned Length:
2435
Identities:
1550
Gaps:
882

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCGCGCAGGCGCTGTGGTGGGCTCCGGTGCACTGTGGGATGGAAACCGGAGCGGCGCGTCCTGGCAGGACCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCGGCGGCGGCGGCGGGGCCGGCGGCGGCCAGGGACCCGGGCTTAGGCTCGGCCAGGCCGGCTGAGGGGCGCGG  148

Query    1  --------------------------ATGAACGCGGCGGTGGTGAGGCGGACGCAGGAGGCGCTGGGGAAAGTG  48
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCGGCCAGCGGGCGGCGGACGCCGTCATGAACGCGGCGGTGGTGAGGCGGACGCAGGAGGCGCTGGGGAAAGTG  222

Query   49  ATTCGGAGGCCGCCGCTGACAGAGAAGCTGCTGAGCAAGCCCCCGTTCCGCTACCTGCACGACATCATCACGGA  122
            ||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATTCGGAGGCCGCCGCTGACCGAGAAGCTGCTGAGCAAGCCCCCGTTCCGCTACCTGCACGACATCATCACGGA  296

Query  123  GGTGATTAGAATGACTGGTTTCATGAAGGGCCTCTACACAGACGCCGAGATGAAGTCTGATAATGTGAAGGATA  196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGTGATTAGAATGACTGGTTTCATGAAGGGCCTCTACACAGACGCCGAGATGAAGTCTGATAATGTGAAGGATA  370

Query  197  AAGATGCAAAAATTAGCTTCCTACAAAAGGCCATAGACGTGGTTGTAATGGTGTCGGGAGAGCCACTGTTGGCC  270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAGATGCAAAAATTAGCTTCCTACAAAAGGCCATAGACGTGGTTGTAATGGTGTCGGGAGAGCCACTGTTGGCC  444

Query  271  AAACCAGCCCGAATCGTGGCGGGGCATGAGCCTGAAAGAACAAACGAGCTGCTCCAGATAATTGGAAAATGCTG  344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAACCAGCCCGAATCGTGGCGGGGCATGAGCCTGAAAGAACAAACGAGCTGCTCCAGATAATTGGAAAATGCTG  518

Query  345  TCTCAACAAGCTCTCTAGTGACGATGCGGTGCGGAGGGTTTTAGCTGGAGAGAAGGGAGAAGTGAAAGGCCGGG  418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCTCAACAAGCTCTCTAGTGACGATGCGGTGCGGAGGGTTTTAGCTGGAGAGAAGGGAGAAGTGAAAGGCCGGG  592

Query  419  CCTCACTGACCTCAAGATCTCAGGAATTGGATAATAAGAATGTGCGAGAAGAAGAGTCCAGAGTTCACAAAAAT  492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCTCACTGACCTCAAGATCTCAGGAATTGGATAATAAGAATGTGCGAGAAGAAGAGTCCAGAGTTCACAAAAAT  666

Query  493  ACAGAGGATAGAGGAGACGCTGAAATAAAAGAGAGAAGTACAAGCAGAGATCGAAAACAGAAGGAAGAATTGAA  566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACAGAGGATAGAGGAGACGCTGAAATAAAAGAGAGAAGTACAAGCAGAGATCGAAAACAGAAGGAAGAATTGAA  740

Query  567  AGAAGACCGCAAGCCAAGAGAAAAGGACAAGGACAAGGAGAAGGCCAAGGAGAATGGCGGAAACAGACACAGAG  640
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGAAGACCGCAAGCCAAGAGAAAAGGACAAGGACAAGGAGAAGGCCAAGGAGAATGGCGGAAACAGACACAGAG  814

Query  641  AAGGGGAGAGAGAGAGAGCCAAAGCCCGGGCCAGGCCAGACAGCGAGCGACAGAAAGACAGAGGCAACAGGGAG  714
            ||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct  815  AAGGGGAGAGAGAGAGAGCCAAAGCCCGGGCCAGGCCAGACAACGAGCGACAGAAAGACAGAGGCAACAGGGAG  888

Query  715  CGGGACAGAGACTCCGAGCGCAAGAAGGAGACAGAGAGAAAGAGTGAGGGGGGGAAAGAGAAGGAGAGACTGAG  788
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CGGGACAGAGACTCCGAGCGCAAGAAGGAGACAGAGAGAAAGAGTGAGGGGGGGAAAGAGAAGGAGAGACTGAG  962

Query  789  AGACAGGGACCGAGAGCGCGACCGGGACAAAGGGAAGGACAGGGACAGACGGAGAGTGAAAAACGGGGAGCACT  862
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGACAGGGACCGAGAGCGCGACCGGGACAAAGGGAAGGACAGGGACAGACGGAGAGTGAAAAACGGGGAGCACT  1036

Query  863  CCTGGGACCTGGACAGGGAGAAGAACAGAGAGCATGACAAACCCGAGAAAAAGTCAGCAAGCTCAGGGGAGATG  936
            |||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1037  CCTGGGACCTGGACAGGGAGAAGAACAGAGAGCATGACAAACCTGAGAAAAAGTCAGCAAGCTCAGGGGAGATG  1110

Query  937  TCTAAAAAGTTATCAGATGGAACTTTTAAAGACTCCAAGGCTGAAACAGAGACTGAGATTTCCACTAGAGCTTC  1010
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TCTAAAAAGTTATCAGATGGAACTTTTAAAGACTCCAAGGCTGAAACAGAGACTGAGATTTCCACTAGAGCTTC  1184

Query 1011  CAAGTCATTGACAACAAAAACATCAAAACGGCGATCCAAAAATTCAGTGG------------------------  1060
            ||||||||||||||||||||||||||||||||||||||||||||||||||                        
Sbjct 1185  CAAGTCATTGACAACAAAAACATCAAAACGGCGATCCAAAAATTCAGTGGAAGGAAGAAGGGACCCTAAAACCA  1258

Query 1061  --------------------------------------------------------------------------  1060
                                                                                      
Sbjct 1259  GTGAAAATAGTCTTTCCCCTGAAAAGGAACATAACTTTTCCTACTGTAAAGCTAAGAAGGAACATAGCATGAAA  1332

Query 1061  --------------------------------------------------------------------------  1060
                                                                                      
Sbjct 1333  CAGCTTGGAAGGAAGGAGGATAATATTTCAGCTAAAAGTTTAGACTCCATAGTGTCTGGAATAAATAATGAGCC  1406

Query 1061  --------------------------------------------------------------------------  1060
                                                                                      
Sbjct 1407  AAATCAGGAAACGACAACATCAGAAATAGGAACAAAAGAAGCTAATATTAACTCAACTAGTATTTCAGATGATA  1480

Query 1061  ------------------------------------------------------AAGGTGACTCCACCAGTGAT  1080
                                                                  ||||||||||||||||||||
Sbjct 1481  ATTCAGCTAGTCTGCGGTGTGAGAATATTCAGCCCAACCCCACAGAGAAGCAGAAAGGTGACTCCACCAGTGAT  1554

Query 1081  GCAGAAGGAGATGCTGGACCTGCTGGCCAAGATAAGTCTGAGGTGCCAGAGACTCCAGAAATTCCTAATGAGCT  1154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GCAGAAGGAGATGCTGGACCTGCTGGCCAAGATAAGTCTGAGGTGCCAGAGACTCCAGAAATTCCTAATGAGCT  1628

Query 1155  TTCATCCAACATCAGAAGAATTCCTCGGCCTGGGAGTGCAAGACCAGCCCCTCCCCGGGTCAAACGGCAAGACA  1228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TTCATCCAACATCAGAAGAATTCCTCGGCCTGGGAGTGCAAGACCAGCCCCTCCCCGGGTCAAACGGCAAGACA  1702

Query 1229  GCATGGAGGCGCTACAAATGGATAGGTCAGGGAGTGGTAAAACCGTTTCAAATGTGATTACAGAGTCACACAAT  1302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GCATGGAGGCGCTACAAATGGATAGGTCAGGGAGTGGTAAAACCGTTTCAAATGTGATTACAGAGTCACACAAT  1776

Query 1303  TCTGACAATGAAGAGGATGATCAATTTGTGGTGGAAGCTGCCCCTCAGCTCTCTGAAATGTCAGAAATTGAAAT  1376
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TCTGACAATGAAGAGGATGATCAATTTGTGGTGGAAGCTGCCCCTCAGCTCTCTGAAATGTCAGAAATTGAAAT  1850

Query 1377  GGTAACAGCAGTGGAACTAGAAGAAGAGGAGAAGCATGGTGGACTTGTGAAAAAAATTTTGGAGACGAAGAAAG  1450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GGTAACAGCAGTGGAACTAGAAGAAGAGGAGAAGCATGGTGGACTTGTGAAAAAAATTTTGGAGACGAAGAAAG  1924

Query 1451  ATTATGAGAAATTGCAGCAGTCACCCAAACCTGGGGAGAA----------------------------------  1490
            ||||||||||||||||||||||||||||||||||||||||                                  
Sbjct 1925  ATTATGAGAAATTGCAGCAGTCACCCAAACCTGGGGAGAAGATTGCAGGTAACTGAAACTGCAGAAAGTGAAAC  1998

Query 1491  ----------------------------------------------------GGAGCGATCTCTCTTTGAGTCG  1512
                                                                ||||||||||||||||||||||
Sbjct 1999  TATGGGTGGGGATAGGACTGTTGTACCTAGAAGTGGGACTGCTGAGGCATACGGAGCGATCTCTCTTTGAGTCG  2072

Query 1513  GCATGGAAGAAGGAGAAGGACATCGTTTCCAAGGAGATAGAGAAGCTCCGCACGTCCATCCAGACCCTGTGCAA  1586
            |||||||||||||||||||||||||||||||||||||||||                                 
Sbjct 2073  GCATGGAAGAAGGAGAAGGACATCGTTTCCAAGGAGATAGA---------------------------------  2113

Query 1587  GAGCGCACTTCCCCTGGGGAAGATCATGGACTACATCCAGGAAGACGTGGATGCCATGCAGAATGAGCTGCAGA  1660
                                                                                      
Sbjct 2114  --------------------------------------------------------------------------  2113

Query 1661  TGTGGCACAGCGAGAACAGGCAGCACGCCGAGGCCCTGCAGCAGGAGCAGAGGATCACAGACTGTGCCGTGGAG  1734
                                                                                      
Sbjct 2114  --------------------------------------------------------------------------  2113

Query 1735  CCCTTAAAGGCTGAGCTCGCGGAGCTGGAGCAGCTGATCAAAGACCAGCAAGACAAGATCTGTGCTGTGAAGGC  1808
                                                                                      
Sbjct 2114  --------------------------------------------------------------------------  2113

Query 1809  CAACATCCTCAAGAATGAAGAAAAAATCCAGAAAATGGTATATAGTATCAATTTGACTTCGAGAAGG  1875
                                                                               
Sbjct 2114  -------------------------------------------------------------------  2113

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