Nucleotide Global Alignment

Description

Query:
TRCN0000489760
Subject:
XM_006539526.3
Aligned Length:
1983
Identities:
1630
Gaps:
216

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCTGGCCGCTCGCCCACCGCACTGGGGTCCCCATCGCGCTCCAGCCCCCCGTGGGCCCAGCGCCATCCCTGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCGGGTCTCAGCGGCGGTGGCAGCCGAGGTGCAGGATGCGAGAAGGCGCCCCCCGGCCGGGCTCCCGCTCCAG  148

Query    1  --------------------------------ATGGCCGTCCCACCGGGCCATGGTCCCTTCTCTGGCTTCCCA  42
                                            ||||||||||||||.|||||||||||.|||||||||||.||.
Sbjct  149  GCCTCACGCCCCTGCGGCCCTCTGAGCCCACCATGGCCGTCCCACCAGGCCATGGTCCTTTCTCTGGCTTTCCG  222

Query   43  GGGCCCCAGGAGCACACGCAGGTATTGCCTGATGTGCGGCTACTGCCTCGGAGGCTGCCCCTGGCCTTCCGGGA  116
            |||||||||||.|||||.||||||.|.||||||||||||||.|||||.|||||.||||||||||||||||||||
Sbjct  223  GGGCCCCAGGAACACACACAGGTACTACCTGATGTGCGGCTCCTGCCCCGGAGACTGCCCCTGGCCTTCCGGGA  296

Query  117  TGCAACCTCAGCCCCGCTGCGTAAGCTCTCTGTGGACCTCATCAAGACCTACAAGCACATCAATGAGGTATACT  190
            |||..||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGCGGCCTCAGCCCCGCTGCGCAAGCTCTCGGTGGACCTCATCAAGACCTACAAGCACATCAATGAGGTATACT  370

Query  191  ATGCGAAGAAGAAGCGGCGGGCCCAGCAGGCGCCACCCCAGGATTCGAGCAACAAGAAGGAGAAGAAGGTCCTG  264
            |||||||||||||||||||||||||.|||||||||||||||||.|||||||.|||.||||||||||||||||||
Sbjct  371  ATGCGAAGAAGAAGCGGCGGGCCCAACAGGCGCCACCCCAGGACTCGAGCACCAAAAAGGAGAAGAAGGTCCTG  444

Query  265  AACCATGGTTATGATGACGACAACCATGACTACATCGTGCGCAGTGGCGAGCGCTGGCTGGAGCGCTACGAAAT  338
            |||||.||||||||||||||||||||.||||||||.|||||||||||||||||||||||.||||||||.||.||
Sbjct  445  AACCACGGTTATGATGACGACAACCACGACTACATTGTGCGCAGTGGCGAGCGCTGGCTAGAGCGCTATGAGAT  518

Query  339  TGACTCGCTCATTGGCAAAGGCTCCTTTGGCCAGGTGGTGAAAGCCTATGATCATCAGACCCAGGAGCTTGTGG  412
            ||||||.||.||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||.||||
Sbjct  519  TGACTCTCTTATTGGCAAAGGCTCCTTTGGCCAGGTGGTGAAAGCCTATGATCACCAGACTCAGGAGCTGGTGG  592

Query  413  CCATCAAGATCATCAAGAACAAAAAGGCTTTCCTGAACCAGGCCCAGATTGAGCTGCGGCTGCTGGAGCTGATG  486
            ||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.||||||.|||||||||||
Sbjct  593  CCATCAAGATCATCAAGAACAAAAAGGCCTTCCTGAACCAGGCACAGATTGAGCTACGGCTGTTGGAGCTGATG  666

Query  487  AACCAGCATGACACGGAGATGAAGTACTATATAGTACACCTGAAGCGGCACTTCATGTTCCGGAACCACCTGTG  560
            |||||||||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||||.||||||||
Sbjct  667  AACCAGCATGATACAGAGATGAAGTACTACATAGTACACCTTAAGCGGCACTTCATGTTCCGGAATCACCTGTG  740

Query  561  CCTGGTATTTGAGCTGCTGTCCTACAACCTGTACGACCTCCTGCGCAACACCCACTTCCGCGGCGTCTCGCTGA  634
            ||||||.|||||||||||||||||||||||||||||||||||.||||||||.|||||.||.||.|||||.||||
Sbjct  741  CCTGGTGTTTGAGCTGCTGTCCTACAACCTGTACGACCTCCTCCGCAACACACACTTTCGGGGTGTCTCACTGA  814

Query  635  ACCTGACCCGGAAGCTGGCGCAGCAGCTCTGCACGGCACTGCTCTTTCTGGCCACGCCTGAGCTCAGCATCATT  708
            |||||||..||||||||||.||||||||||||||.||.|||||||||||||||||.||.||||||||||||||.
Sbjct  815  ACCTGACGAGGAAGCTGGCACAGCAGCTCTGCACAGCTCTGCTCTTTCTGGCCACCCCCGAGCTCAGCATCATC  888

Query  709  CACTGCGACCTCAAGCCCGAAAACATCTTGCTGTGCAACCCCAAGCGCAGCGCCATCAAGATTGTGGACTTCGG  782
            |||||||||||||||||.||.||||||.||||.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct  889  CACTGCGACCTCAAGCCTGAGAACATCCTGCTCTGCAACCCCAAGCGCAGTGCCATCAAGATCGTGGACTTCGG  962

Query  783  CAGCTCCTGCCAGCTTGGCCAGAGGATCTACCAGTATATCCAGAGCCGCTTCTACCGCTCACCTGAGGTGCTCC  856
            |||.||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct  963  CAGTTCCTGCCAGCTTGGCCAGCGGATCTACCAGTATATCCAGAGCCGCTTCTACCGCTCACCCGAGGTGCTCC  1036

Query  857  TGGGCACACCCTACGACCTGGCCATTGACATGTGGTCCCTGGGCTGCATCCTTGTGGAGATGCACACCGGAGAG  930
            ||||.||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1037  TGGGTACACCCTATGACCTGGCCATTGACATGTGGTCCCTGGGCTGCATCCTCGTGGAGATGCACACCGGAGAG  1110

Query  931  CCCCTCTTCAGTGGCTCCAATGAGGTCGACCAGATGAACCGCATTGTGGAGGTGCTGGGCATCCCACCGGCCGC  1004
            |||||||||||||||||.||||||||.||||||||||.|||.||||||||||||.||||||||||.||.||..|
Sbjct 1111  CCCCTCTTCAGTGGCTCTAATGAGGTGGACCAGATGAGCCGTATTGTGGAGGTGTTGGGCATCCCTCCCGCACC  1184

Query 1005  CATGCTGGACCAGGCGCCCAAGGCTCGCAAGTACTTTGAACGGCTGCCTGGGGGTGGCTGGACCCTACGAAGGA  1078
            |||||||||.|||||.|||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1185  CATGCTGGAACAGGCACCCAAGGCTCGAAAGTACTTTGAGCGGCTGCCTGGGGGTGGCTGGACCCTACGAAGGA  1258

Query 1079  CGAAAGAACTCAGGA------------------------------------AGGACCTGGTGCTGCGCATGCTG  1116
            |.||.||||||||||                                    |||||||||||||||||||||||
Sbjct 1259  CAAAGGAACTCAGGAAGGATTACCAGGGCCCTGGGACACGGCGGCTGCAGGAGGACCTGGTGCTGCGCATGCTG  1332

Query 1117  GAGTATGAGCCCGCCGCCCGCATCAGCCCCCTGGGGGCTCTGCAGCACGGCTTCTTCCGCCGCACGGCCGACGA  1190
            ||.||||||||||||||||||||||||||.|||||.|||||||||||.||||||||||||||||||||||||||
Sbjct 1333  GAATATGAGCCCGCCGCCCGCATCAGCCCTCTGGGCGCTCTGCAGCATGGCTTCTTCCGCCGCACGGCCGACGA  1406

Query 1191  GGCCACCAACACGGGCCCGGCAGGCAGCAGTGCCTCCACCTCGCCCGCGCCCCTCGACACCTGCCCCTCTTCCA  1264
            |||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||.||.|
Sbjct 1407  GGCCACCAACACGGGCCCGGCAGGCAGCAGTGCCTCCACCTCGCCGGCGCCCCTTGACACCTGCCCCTCCTCTA  1480

Query 1265  GCACCGCCAGCTCCATCTCCAGTTCTGGAGGCTCCAGTGGCTCCTCCAGTGACAACCGGACCTACCGCTACAGC  1338
            ||||||||||||||||||||||.||||||||.||||||||||||||||..||||||.|..|||||||.||||||
Sbjct 1481  GCACCGCCAGCTCCATCTCCAGCTCTGGAGGTTCCAGTGGCTCCTCCAACGACAACAGAGCCTACCGATACAGC  1554

Query 1339  AACCGATATTGTGGGGGCCCTGGGCCCCCTATCACAGACTGTGAGATGAACAGCCCCCAGGTCCCACCCTCCCA  1412
            ||||||||||||||||||||.||||||||.|||||.||||||||||||||||||||||||||||.|||||||||
Sbjct 1555  AACCGATATTGTGGGGGCCCAGGGCCCCCCATCACTGACTGTGAGATGAACAGCCCCCAGGTCCTACCCTCCCA  1628

Query 1413  GCCGCTGCGGCCCTGGGCAGGGGGTGATGTGCCCCACAAGACACATCAAGCCCCTGCCTCTGCCTCGTCACTGC  1486
            |||.|||||.|||||||||||||||||||||||||||||||||||||||||||||..|||||||||..||.|||
Sbjct 1629  GCCTCTGCGCCCCTGGGCAGGGGGTGATGTGCCCCACAAGACACATCAAGCCCCTATCTCTGCCTCAACATTGC  1702

Query 1487  CTGGGACCGGGGCCCAGTTACCCCCCCAGCCCCGATACCTTGGTCGTCCCCCATCACCAACCTCACCACCACCC  1560
            |.|||||.|||||.|||||||||||...||||||.|.||||||.||.||||||||||||||.||||||||||||
Sbjct 1703  CGGGGACTGGGGCTCAGTTACCCCCATTGCCCCGTTGCCTTGGACGACCCCCATCACCAACATCACCACCACCC  1776

Query 1561  CCGGAGCTGATGGATGTGAGCCTGGTGGGCGGCCCTGCTGACTGCTCCCCACCTCACCCAGCGCCTGCCCCCCA  1634
            ||.|||.|||||||||||||||||||||||.|||||.|.||||||||.|||||||..|||||.|||||||||||
Sbjct 1777  CCAGAGTTGATGGATGTGAGCCTGGTGGGCAGCCCTCCAGACTGCTCTCCACCTCCTCCAGCACCTGCCCCCCA  1850

Query 1635  GCACCCGGCTGCCTCAGCCCTCCGGACTCGGATGACTGGAGGTCGTCCACCCCTCCCGCCTCCTGATGACCCTG  1708
            ||||||||||||||||||||||||||||||||||||.||||||||.|||||.|||||.||.|||||||||||||
Sbjct 1851  GCACCCGGCTGCCTCAGCCCTCCGGACTCGGATGACAGGAGGTCGACCACCTCTCCCACCCCCTGATGACCCTG  1924

Query 1709  CCACTCTGGGGCCTCACCTGGGCCTCCGTGGTGTACCCCAGAGCACAGCAGCCAGCTCG  1767
            |||||||||||||||.||||||.||||.||||||||||||||||||||||||||||||.
Sbjct 1925  CCACTCTGGGGCCTCGCCTGGGTCTCCATGGTGTACCCCAGAGCACAGCAGCCAGCTCA  1983

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