Nucleotide Global Alignment

Description

Query:
TRCN0000491463
Subject:
XM_006507443.2
Aligned Length:
2776
Identities:
2288
Gaps:
170

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTGGAAAGTGTGAGGGACACAGGAGCGACCTGCATACCTGAGCCTCCGAGAGAGAAGCTGCACTCTGGCAT  74

Query    1  ----------------------------------ATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGG  40
                                              |||.|||||||.|||||||||..|||||||||||||||||
Sbjct   75  CCAGCAGCAGGAGACTAAGCAGATAAAAGGAGCCATGACTTCTGACGCTAGTCATATGCTGGAAGCTGCCCTGG  148

Query   41  AGCAAATGGACGGGATCATTGCAGGCACTAAAACAGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTG  114
            ||||.|||||||||||||||||||||||||||||||.|||||||.|||||||||||||.|||||||||||.|||
Sbjct  149  AGCAGATGGACGGGATCATTGCAGGCACTAAAACAGCTGCAGATTTTAGTGATGGTACCTGTGAGCCTGGGCTG  222

Query  115  GCTTCCCCGGCCTCCTACATGAACCCCTTCCCGGTGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGAT  188
            .||.||||..||.|||.|.|||||.||.|.||.||||||||||||||.||||||.||||.||.|||||||||||
Sbjct  223  TCTCCCCCATCCACCTGCTTGAACTCCATGCCTGTGCTCCATCTCATTGAGGACCTGAGACTAGCCTTGGAGAT  296

Query  189  GCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCCTGAGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAAT  262
            |.|||..|||||||||||.||||.||||||||||||||||.|||||||||||||||||.|||||||||||||.|
Sbjct  297  GTTGGCACTTCCTCAGGAAAGAGAAGCCCTCCTGAGCCAGGTCCCTGGCCCAACAGCTACCTACATAAAGGAGT  370

Query  263  GGTTTGAAGAGAGCTTGTCCCAGGTAAACCACCACAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCA  336
            |||||||.||.|||||||||||||||||.||||||.||||||||||||||||||||||||||||||||.|||||
Sbjct  371  GGTTTGAGGACAGCTTGTCCCAGGTAAATCACCACGGTGCTGCTAGTAATGAAACCTACCAGGAACGCCTGGCA  444

Query  337  CGTCTAGAAGGGGATAAGGAGTCCCTCATATTGCAGGTGAGTGTCATCACAGACCAAGTAGAAGCCCAGGGAGA  410
            ||.||||||||.|||||.||||||||||||.|.||||||||.|||.|||||||.|||||.||||||||.|||||
Sbjct  445  CGGCTAGAAGGAGATAAAGAGTCCCTCATACTACAGGTGAGCGTCCTCACAGATCAAGTGGAAGCCCAAGGAGA  518

Query  411  AAAGATTCGAGACCTGGAAGTGTGTCTGGAAGGACACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAAC  484
            .||||||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||.||||||||||||||.|
Sbjct  519  GAAGATTCGGGACCTTGAAGTGTGTCTGGAAGGCCACCAGGTGAAGCTCAATGCTGCAGAAGAGATGCTTCAGC  592

Query  485  AGGAGCTGCTAAGCCGCACATCTCTTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTC  558
            |||||||||||||.|||||||||||.||||||||||||.|.||||||||||||||.||||||||||||||||||
Sbjct  593  AGGAGCTGCTAAGTCGCACATCTCTGGAGACCCAGAAGTTGGATCTGATGACTGAGGTGTCTGAGCTGAAGCTC  666

Query  559  AAGCTGGTTGGCATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGA  632
            |||||||||||.|||||.||.||.||||.|||.||.||.||.||.|||||||||||||||||||||||||||||
Sbjct  667  AAGCTGGTTGGTATGGAAAAAGAACAGAAAGAACAAGAAGAAAAACAGAGAAAAGCAGAGGAGTTACTGCAAGA  740

Query  633  GCTCAGGCACCTCAAAATCAAAGTGGAAGAGTTGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCA  706
            |||.|.|||||||||||||||.|||||.|||.||||.||.||..||||.||||||||.|||.||||.|||||||
Sbjct  741  GCTTAAGCACCTCAAAATCAAGGTGGAGGAGCTGGAGAACGAGCGGAACCAGTATGAGTGGGAGCTGAAGGCCA  814

Query  707  CTAAGGCTGAAGTCGCCCAGCTGCAAGAACAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAG  780
            |.||||||||.||.||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||
Sbjct  815  CCAAGGCTGAGGTAGCCCAGCTGCAAGAACAGGTGGCCCTAAAAGATGCAGAAATTGAGCGTCTCCACAGCCAG  888

Query  781  CTCTCCCGGACAGCAGCTCTCCACAGTGAGAGTCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGG  854
            ||||||||||..||||||||||||||.||   .||..|||||.||||.||||||||.||.||||||||||||||
Sbjct  889  CTCTCCCGGAGTGCAGCTCTCCACAGCGA---CCATGCAGAGCGAGATCAAGAAATCCACCGTCTGAAAATGGG  959

Query  855  GATGGAAACTTTGCTGCTTGCCAATGAAGATAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGT  928
            |||||||||..|||||.||||||||||.||||||||||||||||||||||||||.||.||||||||.|||.|||
Sbjct  960  GATGGAAACACTGCTGGTTGCCAATGAGGATAAGGACCGTCGGATAGAGGAGCTGACAGGGCTGTTGAACAAGT  1033

Query  929  ACCGGAAGGTAAAGGAGATTGTGATGGTCACTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAA  1002
            |||..|.||||||||||||||||||||..|||||.||||||||.||.|||||.|||||.|||||||||||.|||
Sbjct 1034  ACCTAAGGGTAAAGGAGATTGTGATGGCAACTCAGGGGCCTTCAGAAAGAACCCTCTCCATCAATGAAGATGAA  1107

Query 1003  CCGGAGGGAGGTTTCAGCAAGTGGAACGCTACAAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCC  1076
            ...||||||.|.|||.|.||.|||||..|.||||||||...|||.||.|||.|....||.||||||||..|.||
Sbjct 1108  ATAGAGGGAAGCTTCCGAAAATGGAATACCACAAATAAAAGCCCAGAGGAAGTCCCGAAGCAAGAGATATCACC  1181

Query 1077  AAGATGTAGCTCTCCTACAGTGGGGCCACCTCCATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGC  1150
            |.||||.||||||||.||....||.||||||||.||||||||||||||||||||.|.||||||||||||.||.|
Sbjct 1182  ACGATGCAGCTCTCCCACCCCAGGACCACCTCCTTTGCCACAGAAATCACTGGAGAGCAGGGCTCAGAAGAAAC  1255

Query 1151  TCTCTTGTAGTCTAGAAGACTTGAGAAGTGAATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTG  1224
            ||||.||.||||||||||||||||||.|||||||||.||||||||||.|.|||||||||||||..|.|||.|||
Sbjct 1256  TCTCCTGCAGTCTAGAAGACTTGAGACGTGAATCTGGGGATAAGTGTGTCGATGGGAACCAGCTGTCCCCAGTG  1329

Query 1225  TTAGAACCCAAGGACAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCAC  1298
            ..|||.||||||||||||.|||||.|.||||||||.|||||.|||||.||||||||||||||||||||||||||
Sbjct 1330  GGAGAGCCCAAGGACAGCTCTTTCCTAGCGGAGCAGAAATACCCCACATTACCTGGGAAGCTTTCAGGAGCCAC  1403

Query 1299  GCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCATCTG-------CCAGCCTGACGCCACGGGGAGCAGCCTG  1365
            .|||||||||||.|||||||||||||||||||    |||       ||||||||||.|..|.||||||||||.|
Sbjct 1404  ACCCAATGGAGAAGCTGCCAAATCTCCTCCCA----CTGCCTCCCTCCAGCCTGACTCTTCAGGGAGCAGCCAG  1473

Query 1366  CTGAGGCTGA---------------------------------GAGACACAGAAAGTGGCTGGGATGACACTGC  1406
            |..|.|||||                                 |||||||||||.|.||||||||.||.|..| 
Sbjct 1474  CCAAAGCTGAATCGCGGCTGGAGTGTCAGTGCTCCCGTATTAGGAGACACAGAAGGAGGCTGGGAAGATATAG-  1546

Query 1407  TGTGGTCAATGACCTCTCATCCACATCATCGGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTA  1480
                          |||||||..|.||.||.||.|||||.|||.|.|||||||||||..|||||||||||||.|
Sbjct 1547  --------------TCTCATCTGCTTCGTCTGGGACTGAGTCAAGCCCTCAGTCTCCCGTGACACCAGATGGCA  1606

Query 1481  AACGGAATCCCAAAGGCATTAAGAAGTTCTGGGGAAAAATCCGAAGAACTCAGTCAGGAAATTTCTACACTGAC  1554
            ||||||..|||||||||||||||||||||||||||||.|||||||||||||||||.|||||.|||.|.|||||.
Sbjct 1607  AACGGAGCCCCAAAGGCATTAAGAAGTTCTGGGGAAAGATCCGAAGAACTCAGTCTGGAAACTTCAATACTGAT  1680

Query 1555  ACGCTGGGGATGGCAGAGTTTCGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGA  1628
            .|.|.|||||||||||||||||||||||||||||||||.|||||.||.||.|||||.||.||||||||||||||
Sbjct 1681  GCACCGGGGATGGCAGAGTTTCGACGAGGTGGGCTCCGAGCAACTGCGGGACCAAGGCTTTCTAGGACCAGGGA  1754

Query 1629  CTCCAAGGGACAGAAAAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGG  1702
            |.||||||||||||||.||||.||||||||||||||||||||||||||||||||.||.||.|||.|||||.|||
Sbjct 1755  CACCAAGGGACAGAAATGTGATGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAACGCGTATGTACATGGATGG  1828

Query 1703  AGGACTTTGGCCTGGCTCAGTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCC  1776
            ||||.||.|||||||.|||||||||||||||||||||.||||||||..|.|||||.||.||..||.|||||||.
Sbjct 1829  AGGATTTCGGCCTGGGTCAGTATGTGATCTTTGCCAGACAGTGGGTGACATCTGGACATACACTACTGACAGCT  1902

Query 1777  ACCCCTCAGGACATGGAAAAGGAGCTAGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAA  1850
            |||||||||||||||||||||||||||||.|||||.|||||.|||||||||||||||||.||||||||||||||
Sbjct 1903  ACCCCTCAGGACATGGAAAAGGAGCTAGGGATTAAACACCCCCTCCACAGGAAGAAGCTGGTTTTAGCAGTGAA  1976

Query 1851  AGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTGCTAGACCACATTTGGGTGACAAGGTGGCTTGATGATA  1924
            |||.||||||.||||.||.||.||.|.||||||.|||||.||||||||||||||||||.|||||||||||||||
Sbjct 1977  AGCTATCAACGCCAAGCAAGAAGAAACGTCTGCGCTGCTGGACCACATTTGGGTGACACGGTGGCTTGATGATA  2050

Query 1925  TTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATCTAGAGTTGACGGACGAATGCTGCAATACCTAACTGTG  1998
            |||||||||||||.|||||||||||||||||||||||.||||||||.||.||||||||||||||||||||||||
Sbjct 2051  TTGGCTTACCCCAATACAAAGACCAGTTTCATGAATCAAGAGTTGATGGGCGAATGCTGCAATACCTAACTGTG  2124

Query 1999  AACGATTTACTCTTCTTAAAAGTCACCAGCCAACTACATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCA  2072
            ||.|||.||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||
Sbjct 2125  AATGATCTACTCTTCTTAAAAGTCACCAGCCAACTACATCATCTCAGCATCAAATGTGCTATTCACGTGCTACA  2198

Query 2073  TGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCGGCCAGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTG  2146
            |||||||||||||||||||.|||||||||||.||.||||.||||||||||||||||||||.|||||.|||||||
Sbjct 2199  TGTCAACAAGTTCAACCCCAACTGCCTGCACAGGAGGCCTGCTGATGAGAGTAACCTTTCCCCTTCCGAAGTTG  2272

Query 2147  TACAGTGGTCCAACCACAGGGTGATGGAGTGGTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGA  2220
            |.||||||||||||||||||||.|||||||||.|.|||||.||||||||||||||||||||||||||.||||||
Sbjct 2273  TGCAGTGGTCCAACCACAGGGTAATGGAGTGGCTGCGATCCGTGGACCTGGCAGAGTATGCACCCAACCTTCGA  2346

Query 2221  GGGAGTGGAGTCCATGGAGGCCTCATTATCCTGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAA  2294
            ||||||||.||||||||.||||||||||||||||||||.|||||.||||||||||||||||||||||||||.||
Sbjct 2347  GGGAGTGGCGTCCATGGCGGCCTCATTATCCTGGAGCCTCGCTTTACTGGGGACACCCTGGCTATGCTTCTTAA  2420

Query 2295  CATCCCCCCACAAAAGACGCTCCTCAGGCGCCACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTG  2368
            ||||||||||||.||||||||||||||||||||.|||||||||||||||||.|||.||||||||||.|||||||
Sbjct 2421  CATCCCCCCACAGAAGACGCTCCTCAGGCGCCATCTGACCACCAAGTTCAACGCCCTGATTGGTCCTGAGGCTG  2494

Query 2369  AACAGGAAAAGCGAGAGAAAATGGCCTCACCAGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGG  2442
            ||||||||||||||||.||||||||||||||.||.||||||||.|||||||||||.||||||||.|||||.|||
Sbjct 2495  AACAGGAAAAGCGAGACAAAATGGCCTCACCCGCCTACACACCTCTGACCACCACCGCCAAAGTTCGGCCTAGG  2568

Query 2443  AAACTAGGATTTTCACACTTCGGAAACATAAGAAAAAAGAAGTTCGATGAATCGACGGACTACATTTGCCCAAT  2516
            |||||.|||||||||||.||.||||||||.||||||||||||||.||||||||.||.||.|||||||||||.||
Sbjct 2569  AAACTTGGATTTTCACATTTTGGAAACATGAGAAAAAAGAAGTTTGATGAATCTACAGATTACATTTGCCCCAT  2642

Query 2517  GGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGGTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCC  2590
            ||||||..|.||.|.|||||||||.||.||||||||||||.|.|.|||||||||||||||.||||||||...||
Sbjct 2643  GGAGCCTGGAGATGCTGTCAGTGACAGCCACAGGGTCTACGGAGTCTACCGGGGCCTCAGTCCCCTTGACAACC  2716

Query 2591  CTGAACTGGATGGGCTGGACCAGGTGGGACAGATCAGC  2628
            .||||||.|||||..|||||||||||||||||||.|||
Sbjct 2717  ATGAACTAGATGGTTTGGACCAGGTGGGACAGATAAGC  2754

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