Nucleotide Global Alignment

Description

Query:
TRCN0000491463
Subject:
XM_006507448.3
Aligned Length:
2680
Identities:
1877
Gaps:
536

Alignment

Query    1  ATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGGAGCAAATGGACGGGATCATTGCAGGCACTAAAAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTGGCTTCCCCGGCCTCCTACATGAACCCCTTCCCGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAGAGCTTGTCCCAGGTAAACCACCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTCTAGAAGGGGATAAGGAGTCCCTCATATTGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AGGTGAGTGTCATCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAGACCTGGAAGTGTGTCTGGAAGGA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CACCAGGTGAAACTCAATGCTG------CTGAAGAGATGC---TT---CAACAGGAGCTGCTAAGCCGCACATC  506
                            ||||||      ||||.||||.||   ||   ||  |.|||||||||||.||||||||
Sbjct    1  ----------------ATGCTGAAGCTCCTGAGGAGACGCAGATTGCCCA--ATGAGCTGCTAAGTCGCACATC  56

Query  507  TCTTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGG  580
            |||.||||||||||||.|.||||||||||||||.|||||||||||||||||||||||||||||.|||||.||.|
Sbjct   57  TCTGGAGACCCAGAAGTTGGATCTGATGACTGAGGTGTCTGAGCTGAAGCTCAAGCTGGTTGGTATGGAAAAAG  130

Query  581  AGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAA  654
            |.||||.|||.||.||.||.||.||||||||||||||||||||||||||||||||.|.|||||||||||||||.
Sbjct  131  AACAGAAAGAACAAGAAGAAAAACAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTTAAGCACCTCAAAATCAAG  204

Query  655  GTGGAAGAGTTGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCT  728
            |||||.|||.||||.||.||..||||.||||||||.|||.||||.||||||||.||||||||.||.||||||||
Sbjct  205  GTGGAGGAGCTGGAGAACGAGCGGAACCAGTATGAGTGGGAGCTGAAGGCCACCAAGGCTGAGGTAGCCCAGCT  278

Query  729  GCAAGAACAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCC  802
            ||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||..||||||||||
Sbjct  279  GCAAGAACAGGTGGCCCTAAAAGATGCAGAAATTGAGCGTCTCCACAGCCAGCTCTCCCGGAGTGCAGCTCTCC  352

Query  803  ACAGTGAGAGTCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCC  876
            ||||.||   .||..|||||.||||.||||||||.||.|||||||||||||||||||||||..|||||.|||||
Sbjct  353  ACAGCGA---CCATGCAGAGCGAGATCAAGAAATCCACCGTCTGAAAATGGGGATGGAAACACTGCTGGTTGCC  423

Query  877  AATGAAGATAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGT  950
            |||||.||||||||||||||||||||||||||.||.||||||||.|||.||||||..|.|||||||||||||||
Sbjct  424  AATGAGGATAAGGACCGTCGGATAGAGGAGCTGACAGGGCTGTTGAACAAGTACCTAAGGGTAAAGGAGATTGT  497

Query  951  GATGGTCACTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGT  1024
            |||||..|||||.||||||||.||.|||||.|||||.|||||||||||.|||...||||||.|.|||.|.||.|
Sbjct  498  GATGGCAACTCAGGGGCCTTCAGAAAGAACCCTCTCCATCAATGAAGATGAAATAGAGGGAAGCTTCCGAAAAT  571

Query 1025  GGAACGCTACAAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTG  1098
            ||||..|.||||||||...|||.||.|||.|....||.||||||||..|.|||.||||.||||||||.||....
Sbjct  572  GGAATACCACAAATAAAAGCCCAGAGGAAGTCCCGAAGCAAGAGATATCACCACGATGCAGCTCTCCCACCCCA  645

Query 1099  GGGCCACCTCCATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTT  1172
            ||.||||||||.||||||||||||||||||||.|.||||||||||||.||.|||||.||.||||||||||||||
Sbjct  646  GGACCACCTCCTTTGCCACAGAAATCACTGGAGAGCAGGGCTCAGAAGAAACTCTCCTGCAGTCTAGAAGACTT  719

Query 1173  GAGAAGTGAATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTT  1246
            ||||.|||||||||.||||||||||.|.|||||||||||||..|.|||.|||..|||.||||||||||||.|||
Sbjct  720  GAGACGTGAATCTGGGGATAAGTGTGTCGATGGGAACCAGCTGTCCCCAGTGGGAGAGCCCAAGGACAGCTCTT  793

Query 1247  TCTTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAA  1320
            ||.|.||||||||.|||||.|||||.||||||||||||||||||||||||||.|||||||||||.|||||||||
Sbjct  794  TCCTAGCGGAGCAGAAATACCCCACATTACCTGGGAAGCTTTCAGGAGCCACACCCAATGGAGAAGCTGCCAAA  867

Query 1321  TCTCCTCCCACCATCTG-------CCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGA------------  1375
            ||||||||||    |||       ||||||||||.|..|.||||||||||.||..|.|||||            
Sbjct  868  TCTCCTCCCA----CTGCCTCCCTCCAGCCTGACTCTTCAGGGAGCAGCCAGCCAAAGCTGAATCGCGGCTGGA  937

Query 1376  ---------------------GAGACACAGAAAGTGGCTGGGATGACACTGCTGTGGTCAATGACCTCTCATCC  1428
                                 |||||||||||.|.||||||||.||.|..|               |||||||.
Sbjct  938  GTGTCAGTGCTCCCGTATTAGGAGACACAGAAGGAGGCTGGGAAGATATAG---------------TCTCATCT  996

Query 1429  ACATCATCGGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCATTAA  1502
            .|.||.||.||.|||||.|||.|.|||||||||||..|||||||||||||.|||||||..||||||||||||||
Sbjct  997  GCTTCGTCTGGGACTGAGTCAAGCCCTCAGTCTCCCGTGACACCAGATGGCAAACGGAGCCCCAAAGGCATTAA  1070

Query 1503  GAAGTTCTGGGGAAAAATCCGAAGAACTCAGTCAGGAAATTTCTACACTGACACGCTGGGGATGGCAGAGTTTC  1576
            |||||||||||||||.|||||||||||||||||.|||||.|||.|.|||||..|.|.|||||||||||||||||
Sbjct 1071  GAAGTTCTGGGGAAAGATCCGAAGAACTCAGTCTGGAAACTTCAATACTGATGCACCGGGGATGGCAGAGTTTC  1144

Query 1577  GACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGAC  1650
            ||||||||||||||||.|||||.||.||.|||||.||.|||||||||||||||.||||||||||||||.||||.
Sbjct 1145  GACGAGGTGGGCTCCGAGCAACTGCGGGACCAAGGCTTTCTAGGACCAGGGACACCAAGGGACAGAAATGTGAT  1218

Query 1651  GCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTCAGTA  1724
            ||||||||||||||||||||||||||||||||.||.||.|||.|||||.|||||||.||.|||||||.||||||
Sbjct 1219  GCCAATGCCCCCTTTGCCCAGTGGAGCACAGAACGCGTATGTACATGGATGGAGGATTTCGGCCTGGGTCAGTA  1292

Query 1725  TGTGATCTTTGCCAGGCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCCACCCCTCAGGACATGGAAAAGG  1798
            |||||||||||||||.||||||||..|.|||||.||.||..||.|||||||.||||||||||||||||||||||
Sbjct 1293  TGTGATCTTTGCCAGACAGTGGGTGACATCTGGACATACACTACTGACAGCTACCCCTCAGGACATGGAAAAGG  1366

Query 1799  AGCTAGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAG  1872
            |||||||.|||||.|||||.|||||||||||||||||.|||||||||||||||||.||||||.||||.||.||.
Sbjct 1367  AGCTAGGGATTAAACACCCCCTCCACAGGAAGAAGCTGGTTTTAGCAGTGAAAGCTATCAACGCCAAGCAAGAA  1440

Query 1873  GAGAAGTCTGCACTGCTAGACCACATTTGGGTGACAAGGTGGCTTGATGATATTGGCTTACCCCAGTACAAAGA  1946
            ||.|.||||||.|||||.||||||||||||||||||.||||||||||||||||||||||||||||.||||||||
Sbjct 1441  GAAACGTCTGCGCTGCTGGACCACATTTGGGTGACACGGTGGCTTGATGATATTGGCTTACCCCAATACAAAGA  1514

Query 1947  CCAGTTTCATGAATCTAGAGTTGACGGACGAATGCTGCAATACCTAACTGTGAACGATTTACTCTTCTTAAAAG  2020
            |||||||||||||||.||||||||.||.||||||||||||||||||||||||||.|||.|||||||||||||||
Sbjct 1515  CCAGTTTCATGAATCAAGAGTTGATGGGCGAATGCTGCAATACCTAACTGTGAATGATCTACTCTTCTTAAAAG  1588

Query 2021  TCACCAGCCAACTACATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCATGTCAACAAGTTCAACCCCCAC  2094
            |||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||.||
Sbjct 1589  TCACCAGCCAACTACATCATCTCAGCATCAAATGTGCTATTCACGTGCTACATGTCAACAAGTTCAACCCCAAC  1662

Query 2095  TGCCTGCACCGGCGGCCAGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTGTACAGTGGTCCAACCACAGGGT  2168
            |||||||||.||.||||.||||||||||||||||||||.|||||.||||||||.||||||||||||||||||||
Sbjct 1663  TGCCTGCACAGGAGGCCTGCTGATGAGAGTAACCTTTCCCCTTCCGAAGTTGTGCAGTGGTCCAACCACAGGGT  1736

Query 2169  GATGGAGTGGTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCC  2242
            .|||||||||.|.|||||.||||||||||||||||||||||||||.||||||||||||||.||||||||.||||
Sbjct 1737  AATGGAGTGGCTGCGATCCGTGGACCTGGCAGAGTATGCACCCAACCTTCGAGGGAGTGGCGTCCATGGCGGCC  1810

Query 2243  TCATTATCCTGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAAAGACGCTC  2316
            ||||||||||||||||.|||||.||||||||||||||||||||||||||.||||||||||||||.|||||||||
Sbjct 1811  TCATTATCCTGGAGCCTCGCTTTACTGGGGACACCCTGGCTATGCTTCTTAACATCCCCCCACAGAAGACGCTC  1884

Query 2317  CTCAGGCGCCACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAAAAGCGAGAGAAAAT  2390
            |||||||||||.|||||||||||||||||.|||.||||||||||.|||||||||||||||||||||||.|||||
Sbjct 1885  CTCAGGCGCCATCTGACCACCAAGTTCAACGCCCTGATTGGTCCTGAGGCTGAACAGGAAAAGCGAGACAAAAT  1958

Query 2391  GGCCTCACCAGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTCACACTTCG  2464
            |||||||||.||.||||||||.|||||||||||.||||||||.|||||.||||||||.|||||||||||.||.|
Sbjct 1959  GGCCTCACCCGCCTACACACCTCTGACCACCACCGCCAAAGTTCGGCCTAGGAAACTTGGATTTTCACATTTTG  2032

Query 2465  GAAACATAAGAAAAAAGAAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACGGTGTCAGT  2538
            |||||||.||||||||||||||.||||||||.||.||.|||||||||||.||||||||..|.||.|.|||||||
Sbjct 2033  GAAACATGAGAAAAAAGAAGTTTGATGAATCTACAGATTACATTTGCCCCATGGAGCCTGGAGATGCTGTCAGT  2106

Query 2539  GATAGTCACAGGGTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCCCTGAACTGGATGGGCTGGACCA  2612
            ||.||.||||||||||||.|.|.|||||||||||||||.||||||||...||.||||||.|||||..|||||||
Sbjct 2107  GACAGCCACAGGGTCTACGGAGTCTACCGGGGCCTCAGTCCCCTTGACAACCATGAACTAGATGGTTTGGACCA  2180

Query 2613  GGTGGGACAGATCAGC  2628
            ||||||||||||.|||
Sbjct 2181  GGTGGGACAGATAAGC  2196

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