Nucleotide Global Alignment

Description

Query:
TRCN0000491463
Subject:
XM_006507451.1
Aligned Length:
2679
Identities:
1841
Gaps:
555

Alignment

Query    1  ATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGGAGCAAATGGACGGGATCATTGCAGGCACTAAAAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTGGCTTCCCCGGCCTCCTACATGAACCCCTTCCCGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAGAGCTTGTCCCAGGTAAACCACCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTCTAGAAGGGGATAAGGAGTCCCTCATATTGC  370
                                                                 ||..|.||.|        |||
Sbjct    1  -----------------------------------------------------ATGTGTAGGC--------TGC  13

Query  371  AGGTGAGTGTCAT-CACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAGA---CCTGGAAGTGTGTCTGGA  440
            ||.||   |.||| |||||.|                      ||||||.|||   ||||..|.| || ||  |
Sbjct   14  AGCTG---GACATCCACAGGC----------------------AGATTCAAGAGCGCCTGTTACT-TG-CT--A  58

Query  441  AGGA-CACCAGGTGAAACTCAATGCTGCTGAAGAGATGCT------TCAACAGGAGCTGCTAAGCCGCACATCT  507
            .||| ||||                  ||||.|||.||.|      |.|.||.|||  ||.|||||.||     
Sbjct   59  GGGACCACC------------------CTGAGGAGCTGGTGGCCGGTGACCACGAG--GCCAAGCCCCA-----  107

Query  508  CTTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGA  581
                  .|||.|.|||       .|.|||||                     .||...|||             
Sbjct  108  ------GCCCTGCAGC-------CAGGACTG---------------------TGCCCCTTG-------------  134

Query  582  GCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAG  655
                        |||||.|            .||...|||||||||||||||||.|.|||||||||||||||.|
Sbjct  135  ------------GGAGGGG------------TCACCTGAGTTACTGCAAGAGCTTAAGCACCTCAAAATCAAGG  184

Query  656  TGGAAGAGTTGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTG  729
            ||||.|||.||||.||.||..||||.||||||||.|||.||||.||||||||.||||||||.||.|||||||||
Sbjct  185  TGGAGGAGCTGGAGAACGAGCGGAACCAGTATGAGTGGGAGCTGAAGGCCACCAAGGCTGAGGTAGCCCAGCTG  258

Query  730  CAAGAACAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCCA  803
            |||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||..|||||||||||
Sbjct  259  CAAGAACAGGTGGCCCTAAAAGATGCAGAAATTGAGCGTCTCCACAGCCAGCTCTCCCGGAGTGCAGCTCTCCA  332

Query  804  CAGTGAGAGTCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCCA  877
            |||.||   .||..|||||.||||.||||||||.||.|||||||||||||||||||||||..|||||.||||||
Sbjct  333  CAGCGA---CCATGCAGAGCGAGATCAAGAAATCCACCGTCTGAAAATGGGGATGGAAACACTGCTGGTTGCCA  403

Query  878  ATGAAGATAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGTG  951
            ||||.||||||||||||||||||||||||||.||.||||||||.|||.||||||..|.||||||||||||||||
Sbjct  404  ATGAGGATAAGGACCGTCGGATAGAGGAGCTGACAGGGCTGTTGAACAAGTACCTAAGGGTAAAGGAGATTGTG  477

Query  952  ATGGTCACTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTG  1025
            ||||..|||||.||||||||.||.|||||.|||||.|||||||||||.|||...||||||.|.|||.|.||.||
Sbjct  478  ATGGCAACTCAGGGGCCTTCAGAAAGAACCCTCTCCATCAATGAAGATGAAATAGAGGGAAGCTTCCGAAAATG  551

Query 1026  GAACGCTACAAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTGG  1099
            |||..|.||||||||...|||.||.|||.|....||.||||||||..|.|||.||||.||||||||.||....|
Sbjct  552  GAATACCACAAATAAAAGCCCAGAGGAAGTCCCGAAGCAAGAGATATCACCACGATGCAGCTCTCCCACCCCAG  625

Query 1100  GGCCACCTCCATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTTG  1173
            |.||||||||.||||||||||||||||||||.|.||||||||||||.||.|||||.||.|||||||||||||||
Sbjct  626  GACCACCTCCTTTGCCACAGAAATCACTGGAGAGCAGGGCTCAGAAGAAACTCTCCTGCAGTCTAGAAGACTTG  699

Query 1174  AGAAGTGAATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTT  1247
            |||.|||||||||.||||||||||.|.|||||||||||||..|.|||.|||..|||.||||||||||||.||||
Sbjct  700  AGACGTGAATCTGGGGATAAGTGTGTCGATGGGAACCAGCTGTCCCCAGTGGGAGAGCCCAAGGACAGCTCTTT  773

Query 1248  CTTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAAT  1321
            |.|.||||||||.|||||.|||||.||||||||||||||||||||||||||.|||||||||||.||||||||||
Sbjct  774  CCTAGCGGAGCAGAAATACCCCACATTACCTGGGAAGCTTTCAGGAGCCACACCCAATGGAGAAGCTGCCAAAT  847

Query 1322  CTCCTCCCACCATCTG-------CCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGA-------------  1375
            |||||||||    |||       ||||||||||.|..|.||||||||||.||..|.|||||             
Sbjct  848  CTCCTCCCA----CTGCCTCCCTCCAGCCTGACTCTTCAGGGAGCAGCCAGCCAAAGCTGAATCGCGGCTGGAG  917

Query 1376  --------------------GAGACACAGAAAGTGGCTGGGATGACACTGCTGTGGTCAATGACCTCTCATCCA  1429
                                |||||||||||.|.||||||||.||.|..|               |||||||..
Sbjct  918  TGTCAGTGCTCCCGTATTAGGAGACACAGAAGGAGGCTGGGAAGATATAG---------------TCTCATCTG  976

Query 1430  CATCATCGGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCATTAAG  1503
            |.||.||.||.|||||.|||.|.|||||||||||..|||||||||||||.|||||||..|||||||||||||||
Sbjct  977  CTTCGTCTGGGACTGAGTCAAGCCCTCAGTCTCCCGTGACACCAGATGGCAAACGGAGCCCCAAAGGCATTAAG  1050

Query 1504  AAGTTCTGGGGAAAAATCCGAAGAACTCAGTCAGGAAATTTCTACACTGACACGCTGGGGATGGCAGAGTTTCG  1577
            ||||||||||||||.|||||||||||||||||.|||||.|||.|.|||||..|.|.||||||||||||||||||
Sbjct 1051  AAGTTCTGGGGAAAGATCCGAAGAACTCAGTCTGGAAACTTCAATACTGATGCACCGGGGATGGCAGAGTTTCG  1124

Query 1578  ACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGACG  1651
            |||||||||||||||.|||||.||.||.|||||.||.|||||||||||||||.||||||||||||||.||||.|
Sbjct 1125  ACGAGGTGGGCTCCGAGCAACTGCGGGACCAAGGCTTTCTAGGACCAGGGACACCAAGGGACAGAAATGTGATG  1198

Query 1652  CCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTCAGTAT  1725
            |||||||||||||||||||||||||||||||.||.||.|||.|||||.|||||||.||.|||||||.|||||||
Sbjct 1199  CCAATGCCCCCTTTGCCCAGTGGAGCACAGAACGCGTATGTACATGGATGGAGGATTTCGGCCTGGGTCAGTAT  1272

Query 1726  GTGATCTTTGCCAGGCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCCACCCCTCAGGACATGGAAAAGGA  1799
            ||||||||||||||.||||||||..|.|||||.||.||..||.|||||||.|||||||||||||||||||||||
Sbjct 1273  GTGATCTTTGCCAGACAGTGGGTGACATCTGGACATACACTACTGACAGCTACCCCTCAGGACATGGAAAAGGA  1346

Query 1800  GCTAGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAGG  1873
            ||||||.|||||.|||||.|||||||||||||||||.|||||||||||||||||.||||||.||||.||.||.|
Sbjct 1347  GCTAGGGATTAAACACCCCCTCCACAGGAAGAAGCTGGTTTTAGCAGTGAAAGCTATCAACGCCAAGCAAGAAG  1420

Query 1874  AGAAGTCTGCACTGCTAGACCACATTTGGGTGACAAGGTGGCTTGATGATATTGGCTTACCCCAGTACAAAGAC  1947
            |.|.||||||.|||||.||||||||||||||||||.||||||||||||||||||||||||||||.|||||||||
Sbjct 1421  AAACGTCTGCGCTGCTGGACCACATTTGGGTGACACGGTGGCTTGATGATATTGGCTTACCCCAATACAAAGAC  1494

Query 1948  CAGTTTCATGAATCTAGAGTTGACGGACGAATGCTGCAATACCTAACTGTGAACGATTTACTCTTCTTAAAAGT  2021
            ||||||||||||||.||||||||.||.||||||||||||||||||||||||||.|||.||||||||||||||||
Sbjct 1495  CAGTTTCATGAATCAAGAGTTGATGGGCGAATGCTGCAATACCTAACTGTGAATGATCTACTCTTCTTAAAAGT  1568

Query 2022  CACCAGCCAACTACATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCATGTCAACAAGTTCAACCCCCACT  2095
            ||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||.|||
Sbjct 1569  CACCAGCCAACTACATCATCTCAGCATCAAATGTGCTATTCACGTGCTACATGTCAACAAGTTCAACCCCAACT  1642

Query 2096  GCCTGCACCGGCGGCCAGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTGTACAGTGGTCCAACCACAGGGTG  2169
            ||||||||.||.||||.||||||||||||||||||||.|||||.||||||||.||||||||||||||||||||.
Sbjct 1643  GCCTGCACAGGAGGCCTGCTGATGAGAGTAACCTTTCCCCTTCCGAAGTTGTGCAGTGGTCCAACCACAGGGTA  1716

Query 2170  ATGGAGTGGTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCT  2243
            |||||||||.|.|||||.||||||||||||||||||||||||||.||||||||||||||.||||||||.|||||
Sbjct 1717  ATGGAGTGGCTGCGATCCGTGGACCTGGCAGAGTATGCACCCAACCTTCGAGGGAGTGGCGTCCATGGCGGCCT  1790

Query 2244  CATTATCCTGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAAAGACGCTCC  2317
            |||||||||||||||.|||||.||||||||||||||||||||||||||.||||||||||||||.||||||||||
Sbjct 1791  CATTATCCTGGAGCCTCGCTTTACTGGGGACACCCTGGCTATGCTTCTTAACATCCCCCCACAGAAGACGCTCC  1864

Query 2318  TCAGGCGCCACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAAAAGCGAGAGAAAATG  2391
            ||||||||||.|||||||||||||||||.|||.||||||||||.|||||||||||||||||||||||.||||||
Sbjct 1865  TCAGGCGCCATCTGACCACCAAGTTCAACGCCCTGATTGGTCCTGAGGCTGAACAGGAAAAGCGAGACAAAATG  1938

Query 2392  GCCTCACCAGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTCACACTTCGG  2465
            ||||||||.||.||||||||.|||||||||||.||||||||.|||||.||||||||.|||||||||||.||.||
Sbjct 1939  GCCTCACCCGCCTACACACCTCTGACCACCACCGCCAAAGTTCGGCCTAGGAAACTTGGATTTTCACATTTTGG  2012

Query 2466  AAACATAAGAAAAAAGAAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACGGTGTCAGTG  2539
            ||||||.||||||||||||||.||||||||.||.||.|||||||||||.||||||||..|.||.|.||||||||
Sbjct 2013  AAACATGAGAAAAAAGAAGTTTGATGAATCTACAGATTACATTTGCCCCATGGAGCCTGGAGATGCTGTCAGTG  2086

Query 2540  ATAGTCACAGGGTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCCCTGAACTGGATGGGCTGGACCAG  2613
            |.||.||||||||||||.|.|.|||||||||||||||.||||||||...||.||||||.|||||..||||||||
Sbjct 2087  ACAGCCACAGGGTCTACGGAGTCTACCGGGGCCTCAGTCCCCTTGACAACCATGAACTAGATGGTTTGGACCAG  2160

Query 2614  GTGGGACAGATCAGC  2628
            |||||||||||.|||
Sbjct 2161  GTGGGACAGATAAGC  2175

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