Nucleotide Global Alignment
Description
- Query:
- TRCN0000491572
- Subject:
- NM_027256.2
- Aligned Length:
- 2899
- Identities:
- 1389
- Gaps:
- 1376
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCGCACCTGAAAAAGCGGGTGTATGAGGAGTTCACTAAAGTGGTTCAGCAGCAGCAGGAGGAAATTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TACCAAGAAGCTCCGATTAACAAAGCCGAGCAAATCTGCCGCTCTCCACATAGATCTGTGTAAAGCCACCTCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGCAGATGCTTTGCAGTACCTACTCCAGTTTGCCAGAAAGCCTGTAGAAGCAGAGAGTGTGGAGGGGGTAGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGATTCTCTTGGAACATTATTACAAGGAAAATGATCCATCTGTGAGACTGAAAATTGCATCACTCTTGGGATT 296
Query 1 --------------------------------------------ATGCCATCAACATCCTGCAGAATGAAA--- 27
|.|||||.|||||.||.||||||||||
Sbjct 297 ATTATCAAAGACGGCAGGATTCTCTCCAGACTGCATAATGGACGACGCCATTAACATACTACAGAATGAAAAGT 370
Query 28 -------------------------------------------------------------------------- 27
Sbjct 371 CTCACCAAGTGCTAGCTCAACTACTGGACACTTTGCTTGCAATTGGCAGTAAACTACCAGAAAATCAAGCTACC 444
Query 28 ------------------------------CATCTGACAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCA 71
||.|||||||||||.||.|||||||||||||||||||||.||||
Sbjct 445 CAAGTGCGATTAGTGGATGTGGCCTGCAAGCACCTGACAGATACTTCCCATGGTGTAAGAAATAAGTGCTTGCA 518
Query 72 GTTACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCC 145
.|||||||||||||||||||||||||||||||||||||||||||||.|.||||||..|||||||||||||||.|
Sbjct 519 ATTACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATACTGAAGGCTCAGCTGCCAGAGATGTTC 592
Query 146 AGAAGATTATAGGGGATTACTTCAGTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGCCATGTTGCAG 219
||||.|||||.|||||..||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||
Sbjct 593 AGAAAATTATCGGGGACCACTTCAGTGACCAAGATCCACGGGTCAGAACAGCAGCTATAAAAGCCATGTTGCAG 666
Query 220 CTCCATGAAAGAGGACTGAAATTACACCAAACAATTTATAATCAGGCCTGTAAATTACTCTCTGATGACTATGA 293
||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||.||||||||||||||.||
Sbjct 667 CTCCATGAAAGAGGACTGAAGTTACACCAAACGATTTATAATCAGGCCTGTAAATTGCTCTCTGATGACTACGA 740
Query 294 ACAAGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGCTCTATCCTGAAAGCATTGTCCCAATTC 367
.||.||||||||||||||||||||||||||||||||.|||||.||||||||||||||.||.||.||.|||||.|
Sbjct 741 GCAGGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTTGTCAGCCAGCTCTATCCTGAGAGTATAGTTCCAATAC 814
Query 368 CTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACATGGTCAGTGATGGCTCT 441
|.|||||||||||||||||.||..|||||||||||||.|||||.||||||||.||||||||||||||||||||.
Sbjct 815 CGTCTTCTAATGAAGAAATCCGTCTAGTTGATGATGCATTTGGAAAAATTTGCCACATGGTCAGTGATGGCTCC 888
Query 442 TGGGTGGTTCGTGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGAC 515
|||||||||||||||||.||.|||||.||.||||||||.|||||||||||.||.||||||||||||||||||||
Sbjct 889 TGGGTGGTTCGTGTTCAAGCTGCAAAGCTATTGGGCTCGATGGAGCAAGTTAGCTCTCATTTCTTGGAGCAGAC 962
Query 516 CCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTT 589
.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 963 TCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGCACTGCACATGAGCGTGCCAAGGAACTTTACAGTT 1036
Query 590 CGGGGGAGTTTTCCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAAC 663
||||||||||||||||||||||.||.|||||||||||||||||||||||||||.||||.||.|||||.||||||
Sbjct 1037 CGGGGGAGTTTTCCAGTGGCAGGAAATGGGGAGATGATGCTCCCAAGGAAGAAATAGACACGGGGGCCGTGAAC 1110
Query 664 TTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGC 737
.||||.|||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1111 CTGATAGAGTCAGGAGCGTGTGGAGCCTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGCATTGCTGC 1184
Query 738 TGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACA 811
|||||||||.||.||||||.|.|||||||||||.||||||||||||||.|||||||||||.||.||||||||||
Sbjct 1185 TGTGGAGGCTCTGTGCATGCTAGCCCAGTCTTCGCCCTCTTTTGCTGAAAAGTGCCTTGACTTTCTAGTTGACA 1258
Query 812 TGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGAAAAATCTCTAACAACATCACC 885
|||||||.|||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||||.||||||
Sbjct 1259 TGTTCAATGATGAAATTGAGGAAGTGCGTCTGCAGTCCATACACACCATGAGAAAAATCTCTAACAATATCACC 1332
Query 886 CTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCA 959
||||||||||||||||||||||||||||||||||||.||||||||||||||||.||||||.|||||||||||||
Sbjct 1333 CTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGTTAGAGGATTCATCCAGGGATATTAGAGAGGCTCTTCA 1406
Query 960 TGAACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATT 1033
|||||||||||||||.||||||||.|||||||||||||||||||||||||||.||||||||||.||.|||||..
Sbjct 1407 TGAACTCTTATGCTGCACTAATGTCTCAACCAAAGAAGGGATTCATCTTGCACTGGTGGAGCTTCTAAAAAACC 1480
Query 1034 TAACCAAGTACCCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTG 1107
|||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||.||||||||.|||||.
Sbjct 1481 TAACCAAGTACCCTACTGACAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGCAGCCGGCATCCGACCCTC 1554
Query 1108 GTGCTTCCCTTGGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCC 1181
||||||||..|||||||||||||..|||||||.||||||||||||||.||.|||||||||||||||||.|||||
Sbjct 1555 GTGCTTCCTCTGGTGCCAGAGCTCTTGAGCACGCACCCATTTTTTGATACTGCTGAACCAGACATGGACGATCC 1628
Query 1182 AGCTTATATTGCAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCCAGCATTGTTCTCAG 1255
||||||.|||||||||||.||.|||||.||||||||||||||.||||||||.||||||||||||.|.|||||||
Sbjct 1629 AGCTTACATTGCAGTTTTAGTTCTTATCTTCAATGCTGCTAAGACCTGTCCTACAATGCCAGCACTCTTCTCAG 1702
Query 1256 ATCACACCTTCAGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGT 1329
|.||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.
Sbjct 1703 ACCACACCCTCAGGCACTATGCCTACCTCCGAGACAGCCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGG 1776
Query 1330 AGAAAACTGGTGTCATCAGCTGTTTCTCCC----AGCATCATACCTCAAGAGGATCCTTCCCAGCAGTTCCTGC 1399
||||||||||||||.||..||| |||| |.|||||..|||||.||.||||||||||||||||||||||
Sbjct 1777 AGAAAACTGGTGTCCTCCACTG----TCCCCTCTAACATCACCCCTCATGAAGATCCTTCCCAGCAGTTCCTGC 1846
Query 1400 AGCAGAGCCTTGAAAGAGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACC 1473
||||||||||||||||.|||||||||.||||||||.|.||.||||||||.|||||.||||||||||||||||||
Sbjct 1847 AGCAGAGCCTTGAAAGGGTGTATAGTGTTCAGCACCTAGATCCTCAGGGGGCCCAAGAGCTGCTGGAATTCACC 1920
Query 1474 ATCAGAG-------------TCGAG-GTTTCACCATG--GTGGCCAG-----GCTG------------------ 1508
||||||| |.||| |.||||...|| .||| ||| ||||
Sbjct 1921 ATCAGAGATCTGCAAAGACTTGGAGAGCTTCAGTCTGAATTGG-CAGGAGTAGCTGACTTCTCTGCCACCTATC 1993
Query 1509 ----GTCTCAA--ACTCCTGAGCTCAAG---------------------------------------------- 1530
||.|||| .|||||.| |.|||
Sbjct 1994 TTCAGTGTCAACTGCTCCTCA--TTAAGGCCTTGCAGGAAAAGCTGTGGAATGTGGCTGCCCCCTTGTATCTAA 2065
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2066 AGCAGAGTGATTTGGCCTCAGCAGCAGCAAAACAGATCATGGAGGAAACCTACAAAATGGAGTTTATGTACAGT 2139
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2140 GGTGTGGAAAACAAGCAGGTTGTGATCATACAGCACATGAGGCTTCAGGCCAAAGCTCTGCAACTCATAGTAAC 2213
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2214 TGCACGAACTACTCGAGGAGTAGACCCCTTATTTGGAATGTGTGAAAAATTTTTACAGGAAGTGGATTTTTTTC 2287
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2288 AGAGGTGTTTCATTGCGGATTTGCCCCACCTTCAAGATAGCTTTGTGGACAAACTCCTTGATCTTATGCCCCGA 2361
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2362 CTCATGGCATCTAAACCTGTTGAAGTGATCAAAATTCTGCAGACAATGCTGCGGCAGAGCACCTTCTTACATCT 2435
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2436 TCCGCTTCCAGAGCAGATACACAAAGCCTCAGCCACCATTATTGAGCCGGCAGGAGAGTCAGACAATCCTTTGC 2509
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2510 GGTTTACATCTGGGTTGGTGGTAGCCTTGGATGTGGATGCAACCCTGGAACATGTGCAAGACCCCCAGAACACT 2583
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2584 GTCAAGGTTCAGGTCTTATATCCAGATGGCCAGGCTCAGATGATCCACCCCAAGCCAGCAGATTTCCGGAATCC 2657
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2658 TGGCCCAGGACGGCACCGTCTCCTCACTCAGGTGTACCTCTCCCATACTGCCTGGACAGAACCATGCCAAGTGG 2731
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2732 AAGTGAGGCTATTGCTGGCCTACAACTCCGGTGCACGAATTCCAAAATCTCCATGGCTGGAGGGTAGTGAGATG 2805
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2806 TCACCACAGGTGGAAACCAGCATCGAGGGCACCATCCCCTTCAGTAAGCCTGTGAAAGTCTACATAATGCCCAA 2879
Query 1531 ------------- 1530
Sbjct 2880 GCCTGCAAGACGC 2892
