Nucleotide Global Alignment

Description

Query:
TRCN0000491572
Subject:
NM_027256.2
Aligned Length:
2899
Identities:
1389
Gaps:
1376

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGCGCACCTGAAAAAGCGGGTGTATGAGGAGTTCACTAAAGTGGTTCAGCAGCAGCAGGAGGAAATTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TACCAAGAAGCTCCGATTAACAAAGCCGAGCAAATCTGCCGCTCTCCACATAGATCTGTGTAAAGCCACCTCCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGCAGATGCTTTGCAGTACCTACTCCAGTTTGCCAGAAAGCCTGTAGAAGCAGAGAGTGTGGAGGGGGTAGTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGGATTCTCTTGGAACATTATTACAAGGAAAATGATCCATCTGTGAGACTGAAAATTGCATCACTCTTGGGATT  296

Query    1  --------------------------------------------ATGCCATCAACATCCTGCAGAATGAAA---  27
                                                        |.|||||.|||||.||.||||||||||   
Sbjct  297  ATTATCAAAGACGGCAGGATTCTCTCCAGACTGCATAATGGACGACGCCATTAACATACTACAGAATGAAAAGT  370

Query   28  --------------------------------------------------------------------------  27
                                                                                      
Sbjct  371  CTCACCAAGTGCTAGCTCAACTACTGGACACTTTGCTTGCAATTGGCAGTAAACTACCAGAAAATCAAGCTACC  444

Query   28  ------------------------------CATCTGACAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCA  71
                                          ||.|||||||||||.||.|||||||||||||||||||||.||||
Sbjct  445  CAAGTGCGATTAGTGGATGTGGCCTGCAAGCACCTGACAGATACTTCCCATGGTGTAAGAAATAAGTGCTTGCA  518

Query   72  GTTACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCC  145
            .|||||||||||||||||||||||||||||||||||||||||||||.|.||||||..|||||||||||||||.|
Sbjct  519  ATTACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATACTGAAGGCTCAGCTGCCAGAGATGTTC  592

Query  146  AGAAGATTATAGGGGATTACTTCAGTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGCCATGTTGCAG  219
            ||||.|||||.|||||..||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||
Sbjct  593  AGAAAATTATCGGGGACCACTTCAGTGACCAAGATCCACGGGTCAGAACAGCAGCTATAAAAGCCATGTTGCAG  666

Query  220  CTCCATGAAAGAGGACTGAAATTACACCAAACAATTTATAATCAGGCCTGTAAATTACTCTCTGATGACTATGA  293
            ||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||.||||||||||||||.||
Sbjct  667  CTCCATGAAAGAGGACTGAAGTTACACCAAACGATTTATAATCAGGCCTGTAAATTGCTCTCTGATGACTACGA  740

Query  294  ACAAGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGCTCTATCCTGAAAGCATTGTCCCAATTC  367
            .||.||||||||||||||||||||||||||||||||.|||||.||||||||||||||.||.||.||.|||||.|
Sbjct  741  GCAGGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTTGTCAGCCAGCTCTATCCTGAGAGTATAGTTCCAATAC  814

Query  368  CTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACATGGTCAGTGATGGCTCT  441
            |.|||||||||||||||||.||..|||||||||||||.|||||.||||||||.||||||||||||||||||||.
Sbjct  815  CGTCTTCTAATGAAGAAATCCGTCTAGTTGATGATGCATTTGGAAAAATTTGCCACATGGTCAGTGATGGCTCC  888

Query  442  TGGGTGGTTCGTGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGAC  515
            |||||||||||||||||.||.|||||.||.||||||||.|||||||||||.||.||||||||||||||||||||
Sbjct  889  TGGGTGGTTCGTGTTCAAGCTGCAAAGCTATTGGGCTCGATGGAGCAAGTTAGCTCTCATTTCTTGGAGCAGAC  962

Query  516  CCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTT  589
            .||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  963  TCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGCACTGCACATGAGCGTGCCAAGGAACTTTACAGTT  1036

Query  590  CGGGGGAGTTTTCCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAAC  663
            ||||||||||||||||||||||.||.|||||||||||||||||||||||||||.||||.||.|||||.||||||
Sbjct 1037  CGGGGGAGTTTTCCAGTGGCAGGAAATGGGGAGATGATGCTCCCAAGGAAGAAATAGACACGGGGGCCGTGAAC  1110

Query  664  TTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGC  737
            .||||.|||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1111  CTGATAGAGTCAGGAGCGTGTGGAGCCTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGCATTGCTGC  1184

Query  738  TGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACA  811
            |||||||||.||.||||||.|.|||||||||||.||||||||||||||.|||||||||||.||.||||||||||
Sbjct 1185  TGTGGAGGCTCTGTGCATGCTAGCCCAGTCTTCGCCCTCTTTTGCTGAAAAGTGCCTTGACTTTCTAGTTGACA  1258

Query  812  TGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGAAAAATCTCTAACAACATCACC  885
            |||||||.|||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||||.||||||
Sbjct 1259  TGTTCAATGATGAAATTGAGGAAGTGCGTCTGCAGTCCATACACACCATGAGAAAAATCTCTAACAATATCACC  1332

Query  886  CTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCA  959
            ||||||||||||||||||||||||||||||||||||.||||||||||||||||.||||||.|||||||||||||
Sbjct 1333  CTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGTTAGAGGATTCATCCAGGGATATTAGAGAGGCTCTTCA  1406

Query  960  TGAACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATT  1033
            |||||||||||||||.||||||||.|||||||||||||||||||||||||||.||||||||||.||.|||||..
Sbjct 1407  TGAACTCTTATGCTGCACTAATGTCTCAACCAAAGAAGGGATTCATCTTGCACTGGTGGAGCTTCTAAAAAACC  1480

Query 1034  TAACCAAGTACCCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTG  1107
            |||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||.||||||||.|||||.
Sbjct 1481  TAACCAAGTACCCTACTGACAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGCAGCCGGCATCCGACCCTC  1554

Query 1108  GTGCTTCCCTTGGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCC  1181
            ||||||||..|||||||||||||..|||||||.||||||||||||||.||.|||||||||||||||||.|||||
Sbjct 1555  GTGCTTCCTCTGGTGCCAGAGCTCTTGAGCACGCACCCATTTTTTGATACTGCTGAACCAGACATGGACGATCC  1628

Query 1182  AGCTTATATTGCAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCCAGCATTGTTCTCAG  1255
            ||||||.|||||||||||.||.|||||.||||||||||||||.||||||||.||||||||||||.|.|||||||
Sbjct 1629  AGCTTACATTGCAGTTTTAGTTCTTATCTTCAATGCTGCTAAGACCTGTCCTACAATGCCAGCACTCTTCTCAG  1702

Query 1256  ATCACACCTTCAGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGT  1329
            |.||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.
Sbjct 1703  ACCACACCCTCAGGCACTATGCCTACCTCCGAGACAGCCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGG  1776

Query 1330  AGAAAACTGGTGTCATCAGCTGTTTCTCCC----AGCATCATACCTCAAGAGGATCCTTCCCAGCAGTTCCTGC  1399
            ||||||||||||||.||..|||    ||||    |.|||||..|||||.||.||||||||||||||||||||||
Sbjct 1777  AGAAAACTGGTGTCCTCCACTG----TCCCCTCTAACATCACCCCTCATGAAGATCCTTCCCAGCAGTTCCTGC  1846

Query 1400  AGCAGAGCCTTGAAAGAGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACC  1473
            ||||||||||||||||.|||||||||.||||||||.|.||.||||||||.|||||.||||||||||||||||||
Sbjct 1847  AGCAGAGCCTTGAAAGGGTGTATAGTGTTCAGCACCTAGATCCTCAGGGGGCCCAAGAGCTGCTGGAATTCACC  1920

Query 1474  ATCAGAG-------------TCGAG-GTTTCACCATG--GTGGCCAG-----GCTG------------------  1508
            |||||||             |.||| |.||||...||  .||| |||     ||||                  
Sbjct 1921  ATCAGAGATCTGCAAAGACTTGGAGAGCTTCAGTCTGAATTGG-CAGGAGTAGCTGACTTCTCTGCCACCTATC  1993

Query 1509  ----GTCTCAA--ACTCCTGAGCTCAAG----------------------------------------------  1530
                ||.||||  .|||||.|  |.|||                                              
Sbjct 1994  TTCAGTGTCAACTGCTCCTCA--TTAAGGCCTTGCAGGAAAAGCTGTGGAATGTGGCTGCCCCCTTGTATCTAA  2065

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2066  AGCAGAGTGATTTGGCCTCAGCAGCAGCAAAACAGATCATGGAGGAAACCTACAAAATGGAGTTTATGTACAGT  2139

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2140  GGTGTGGAAAACAAGCAGGTTGTGATCATACAGCACATGAGGCTTCAGGCCAAAGCTCTGCAACTCATAGTAAC  2213

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2214  TGCACGAACTACTCGAGGAGTAGACCCCTTATTTGGAATGTGTGAAAAATTTTTACAGGAAGTGGATTTTTTTC  2287

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2288  AGAGGTGTTTCATTGCGGATTTGCCCCACCTTCAAGATAGCTTTGTGGACAAACTCCTTGATCTTATGCCCCGA  2361

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2362  CTCATGGCATCTAAACCTGTTGAAGTGATCAAAATTCTGCAGACAATGCTGCGGCAGAGCACCTTCTTACATCT  2435

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2436  TCCGCTTCCAGAGCAGATACACAAAGCCTCAGCCACCATTATTGAGCCGGCAGGAGAGTCAGACAATCCTTTGC  2509

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2510  GGTTTACATCTGGGTTGGTGGTAGCCTTGGATGTGGATGCAACCCTGGAACATGTGCAAGACCCCCAGAACACT  2583

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2584  GTCAAGGTTCAGGTCTTATATCCAGATGGCCAGGCTCAGATGATCCACCCCAAGCCAGCAGATTTCCGGAATCC  2657

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2658  TGGCCCAGGACGGCACCGTCTCCTCACTCAGGTGTACCTCTCCCATACTGCCTGGACAGAACCATGCCAAGTGG  2731

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2732  AAGTGAGGCTATTGCTGGCCTACAACTCCGGTGCACGAATTCCAAAATCTCCATGGCTGGAGGGTAGTGAGATG  2805

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2806  TCACCACAGGTGGAAACCAGCATCGAGGGCACCATCCCCTTCAGTAAGCCTGTGAAAGTCTACATAATGCCCAA  2879

Query 1531  -------------  1530
                         
Sbjct 2880  GCCTGCAAGACGC  2892

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