Nucleotide Global Alignment
Description
- Query:
- TRCN0000491572
- Subject:
- NR_146905.1
- Aligned Length:
- 3324
- Identities:
- 1316
- Gaps:
- 1932
Alignment
Query 1 -----------------------ATGCCA--TCAA----CATCCTGCAGAATGAAA---CA--TCTGA------ 34
.||||| ||.| |.||||| |.|| || .|.||
Sbjct 1 GAGGGCGGGAGCGGCAGACTCCGCTGCCAGCTCTACTGGCGTCCTG------GCAAGGGCAGCGCCGAGGGGCG 68
Query 35 ---------CAGAT---ACGTCTCATGG------TG--TA------AGAAATAAG--------TGCCTGCAGTT 74
|||.| .||.|||..|| || || || || |.|||||
Sbjct 69 CTCCCGGTCCAGCTCTCCCGGCTCGGGGGTTCCTTGCCTAGGCGCCAG-----AGCCCCGGGCTCCCTGC---- 133
Query 75 ACTTGGCAATCTTGGCTCTTTGG-------AGAAAAGTGTCACAAAAGATGC---AGAAGGCCTAGCTGCCAGA 138
||.||| |.||.||| || ||.|.||| ||| .|.|||| |.||..|||
Sbjct 134 -CTCGGC--------CGCTGTGGCCTGCATAG---AGCGGCAC------TGCGCGCGGAGGC---GATGGGAGA 186
Query 139 GATGTCCAGAAGATTATAGGG-------------GATTACTTCAGTGAC--------------CAAGACCCACG 185
|| ||||| .|||| || |.|||.|.| ||.|..||.||
Sbjct 187 GA-----AGAAG----GAGGGCGGTGGCGGGGGTGA----TGCAGCGGCCGCTGAGGGTGGCGCAGGGGCCCCG 247
Query 186 TGTCAG-----------AACAG------CAGCTATAAAAGC-CAT-GTTGCAGCTCCATGAAAGAGGACTGAAA 240
|.||| |.||| |||||..|.|||| ||| | |||.|||||| ||..|
Sbjct 248 -GCCAGCCCGGGGCTGCAGCAGTGCAGACAGCTCCAGAAGCTCATCG--GCATCTCCAT----------TGGCA 308
Query 241 TTACACCAAACAATTTATAATCAGGCCTGTAAATTACTC--TCTGATGACTATGAACAAGTGCGCAGTGCTGCA 312
||||| |.| .|||...|| |||||||||.||
Sbjct 309 ------------------------GCCTG-------CGCGGGCTGGGCAC------CAAGTGCGCTGT------ 339
Query 313 GTCCAGCTTATCTGGGTCGTCAGTCAGC--------TCTATCCTGAAAGCATTGTCCCAATTCCTTCTTCTAAT 378
|||||.| |.|.|||...||| ...|.|||| .|||||||||||||||||||||||||||
Sbjct 340 GTCCAAC--------GACCTCACCGAGCAGGAGATACGGACCCTG-GAGCATTGTCCCAATTCCTTCTTCTAAT 404
Query 379 GAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCG 452
||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.
Sbjct 405 GAAGAAATACGCTTAGTTGATGATGCGTTTGGAAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCA 478
Query 453 TGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGA 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 TGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGA 552
Query 527 AGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCGGGGGAGTTT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 553 AGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCAGGGGAGTTT 626
Query 601 TCCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTC 674
|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 627 TCCAGTGGCAGAAAGTGGGAAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTC 700
Query 675 AGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCC 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 701 AGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCC 774
Query 749 TCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGAT 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 TCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGAT 848
Query 823 GAAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGA 896
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 849 GAAATTGAGGAAGTACGTCTGCAGTCCATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGA 922
Query 897 TCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTAT 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 923 TCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTAT 996
Query 971 GCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTAC 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 997 GCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTAC 1070
Query 1045 CCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTT 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1071 CCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTT 1144
Query 1119 GGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGCTTATATTG 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1145 GGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGCTTATATTG 1218
Query 1193 CAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCCAGCATTGTTCTCAGATCACACCTTC 1266
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||| ||
Sbjct 1219 CAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCGAGCATTGTTC-------------TC 1279
Query 1267 AGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGTAGAAAACTGGT 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1280 AGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTGCCAGGTAGAAAACTGGT 1353
Query 1341 GTCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATCCTTCCCAGCAGTTCCTGCAGCAGAGCCTTGAAA 1414
|||||||||||||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||.
Sbjct 1354 GTCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATCCTTCGCAGCAGCTCCTGCAGCAGAGCCTTGAAG 1427
Query 1415 GAGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATCAG---------- 1478
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1428 GAGTGTGTAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATCAGGCCTTGCAGG 1501
Query 1479 ---AGTCGAGGTTTCACCATG--GTGGCC------------AGGC---------TGGTCTCA--AACTCCTGAG 1524
|||||.|| .||| |..||| |.|| |||.|||| |.| ||
Sbjct 1502 AAAAGTCGTGG------AATGTAGCTGCCCCTTCGTATTTGAAGCAGAGTGATTTGGCCTCAGCAGC-----AG 1564
Query 1525 CTCAAG-------------------------------------------------------------------- 1530
|..||.
Sbjct 1565 CGAAACAGACTTTACCCCTTATTTGGGATGTGTGAAAAATTTTTACAGGAAGTAGACTTTTTTCAGAGGACACA 1638
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 1639 TGAACCATTAACAAGAAAAATATTTAAATAAGAAACTCACCAAGCCAGGAGAATAATGAATACCTGGATGTGCC 1712
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 1713 CCCTAGGAATCTGGATCTCTTCTCTTTTCCCCACCCTGCCCTCAACTCCCCTTACATACATACAGCCTGGATCA 1786
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 1787 CAAGACCCAAGAAAACCATTCCACCAGCTGCTGAGAGAAGAGCCACAAAAGGACCCAGAACTTCTCCATGGCTA 1860
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 1861 CCTTAGAGCACCCTAAAATGTGCTAACAGCCATTGTTAGCATTCAGGAGCTGTTTATTCCCATTTTCACACTAC 1934
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 1935 ACTAAAGAATTTTAAACAATCACAAGATAGACTGGCTGGAAGTTGGTGCTTGGAACATCCCACGTCACCTAAAA 2008
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2009 GCACAGTGCTGCAATCTCAGAAACCCCAGGCTCAGCCAGCAGAGAGAGGAGAAGCAGCTGGACATTGGAGACTA 2082
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2083 TGATTGGACATTAGAGAGAAGGAGCTTGACTTCACAGAGAAAGCATGATGGAATAATTTCAGAGAAAAGTCTGG 2156
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2157 CCAGGGATGACCAGACTTCAGGGGAAGATAATCTTGCTCAATATCCTTTTCTGCTCCCCTTCCTGCTGAGAGTC 2230
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2231 ACTTTGATTGGCAATAAAATATCTCACATTTACCATCTTCAATTTGTTCTTGCAACCTCATTCCTCCTGGATGC 2304
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2305 CAGACAAGAACTCAGGTGCCATGAGTATGGGTGCAAAAGGCTATCACACTGTCCCTCCACTGAGCTGTTAACAC 2378
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2379 TTAAGCTATCCATGGACAGCAAAGCTAAAAGGGCACTGTAAGAGTCCTTCTGGGGTTTCAGAAGTCATGAGCAT 2452
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2453 CCCCCAGATGCTGCCATGGGGCCAGTACAGAGTTTGCTCCTGCCAGAGTCCAAAAATGTCTCAGCTCCTGCACC 2526
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2527 CAGTCACCTGCATGCTCCCCCTCCCACAAGTGGTGGAGCACAGTGGGCTGAGTGAGTGGAGTTTGCCCCTGCCA 2600
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2601 GCACCCGTGCACTCCAGTTCCCACCTGTGAAGGTGTCAGAGAGATATTCTGCTTAAAAATCAGAGTGACTCCAT 2674
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2675 CTTAAATAGCAGCTGGGTGAGATAAGGCTGAGACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTCTAACCT 2748
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2749 TCTATCAGGATGAGATAGAAGGCCAGCATAAGATATAGGTCACGAAGACTCTGCTGATAAAACAGGATGTGGTT 2822
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2823 TAAATAAATGCCAGCCAGAACCCACCAAAACCAAGATGGTGATGCTCATTCTCACTGCTCATTATATGCCAGTA 2896
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2897 TAATGCATTTGCATGCAAAAAGACTCTACCACCAGTGCCATGACAGCTTACAGATGCCATGGCAAGATCTGGAA 2970
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2971 GTTACCCTGTAGCCTCTAAAATGGGGAAGAACCCTCAGTTCTGGAAAATTTCTGCCCCTTTCCTGAAAAACTCA 3044
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 3045 TGAATAATCTACCCTTTGTTTAGCATATAATCAAGAAACAACTATAAGTATAGTCAATCGAGCAGCCAATCTCA 3118
Query 1531 -------------------------------------------------------------------- 1530
Sbjct 3119 CCGCTCTGTCTATGGAGTAGTCATTCTTTTATTTACATCTCTAATAAAATTGCTTTCACTTTACTGTA 3186
