Nucleotide Global Alignment

Description

Query:
TRCN0000491572
Subject:
NR_146905.1
Aligned Length:
3324
Identities:
1316
Gaps:
1932

Alignment

Query    1  -----------------------ATGCCA--TCAA----CATCCTGCAGAATGAAA---CA--TCTGA------  34
                                   .|||||  ||.|    |.|||||      |.||   ||  .|.||      
Sbjct    1  GAGGGCGGGAGCGGCAGACTCCGCTGCCAGCTCTACTGGCGTCCTG------GCAAGGGCAGCGCCGAGGGGCG  68

Query   35  ---------CAGAT---ACGTCTCATGG------TG--TA------AGAAATAAG--------TGCCTGCAGTT  74
                     |||.|   .||.|||..||      ||  ||      ||     ||        |.|||||    
Sbjct   69  CTCCCGGTCCAGCTCTCCCGGCTCGGGGGTTCCTTGCCTAGGCGCCAG-----AGCCCCGGGCTCCCTGC----  133

Query   75  ACTTGGCAATCTTGGCTCTTTGG-------AGAAAAGTGTCACAAAAGATGC---AGAAGGCCTAGCTGCCAGA  138
             ||.|||        |.||.|||       ||   ||.|.|||      |||   .|.||||   |.||..|||
Sbjct  134  -CTCGGC--------CGCTGTGGCCTGCATAG---AGCGGCAC------TGCGCGCGGAGGC---GATGGGAGA  186

Query  139  GATGTCCAGAAGATTATAGGG-------------GATTACTTCAGTGAC--------------CAAGACCCACG  185
            ||     |||||    .||||             ||    |.|||.|.|              ||.|..||.||
Sbjct  187  GA-----AGAAG----GAGGGCGGTGGCGGGGGTGA----TGCAGCGGCCGCTGAGGGTGGCGCAGGGGCCCCG  247

Query  186  TGTCAG-----------AACAG------CAGCTATAAAAGC-CAT-GTTGCAGCTCCATGAAAGAGGACTGAAA  240
             |.|||           |.|||      |||||..|.|||| ||| |  |||.||||||          ||..|
Sbjct  248  -GCCAGCCCGGGGCTGCAGCAGTGCAGACAGCTCCAGAAGCTCATCG--GCATCTCCAT----------TGGCA  308

Query  241  TTACACCAAACAATTTATAATCAGGCCTGTAAATTACTC--TCTGATGACTATGAACAAGTGCGCAGTGCTGCA  312
                                    |||||       |.|  .|||...||      |||||||||.||      
Sbjct  309  ------------------------GCCTG-------CGCGGGCTGGGCAC------CAAGTGCGCTGT------  339

Query  313  GTCCAGCTTATCTGGGTCGTCAGTCAGC--------TCTATCCTGAAAGCATTGTCCCAATTCCTTCTTCTAAT  378
            |||||.|        |.|.|||...|||        ...|.|||| .|||||||||||||||||||||||||||
Sbjct  340  GTCCAAC--------GACCTCACCGAGCAGGAGATACGGACCCTG-GAGCATTGTCCCAATTCCTTCTTCTAAT  404

Query  379  GAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCG  452
            ||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.
Sbjct  405  GAAGAAATACGCTTAGTTGATGATGCGTTTGGAAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCA  478

Query  453  TGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGA  526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  479  TGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGA  552

Query  527  AGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCGGGGGAGTTT  600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  553  AGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCAGGGGAGTTT  626

Query  601  TCCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTC  674
            |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  627  TCCAGTGGCAGAAAGTGGGAAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTC  700

Query  675  AGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCC  748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  701  AGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCC  774

Query  749  TCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGAT  822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  775  TCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGAT  848

Query  823  GAAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGA  896
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  849  GAAATTGAGGAAGTACGTCTGCAGTCCATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGA  922

Query  897  TCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTAT  970
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  923  TCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTAT  996

Query  971  GCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTAC  1044
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  997  GCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTAC  1070

Query 1045  CCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTT  1118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1071  CCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTT  1144

Query 1119  GGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGCTTATATTG  1192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1145  GGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGCTTATATTG  1218

Query 1193  CAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCCAGCATTGTTCTCAGATCACACCTTC  1266
            ||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||             ||
Sbjct 1219  CAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCGAGCATTGTTC-------------TC  1279

Query 1267  AGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGTAGAAAACTGGT  1340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1280  AGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTGCCAGGTAGAAAACTGGT  1353

Query 1341  GTCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATCCTTCCCAGCAGTTCCTGCAGCAGAGCCTTGAAA  1414
            |||||||||||||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||.
Sbjct 1354  GTCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATCCTTCGCAGCAGCTCCTGCAGCAGAGCCTTGAAG  1427

Query 1415  GAGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATCAG----------  1478
            ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct 1428  GAGTGTGTAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATCAGGCCTTGCAGG  1501

Query 1479  ---AGTCGAGGTTTCACCATG--GTGGCC------------AGGC---------TGGTCTCA--AACTCCTGAG  1524
               |||||.||      .|||  |..|||            |.||         |||.||||  |.|     ||
Sbjct 1502  AAAAGTCGTGG------AATGTAGCTGCCCCTTCGTATTTGAAGCAGAGTGATTTGGCCTCAGCAGC-----AG  1564

Query 1525  CTCAAG--------------------------------------------------------------------  1530
            |..||.                                                                    
Sbjct 1565  CGAAACAGACTTTACCCCTTATTTGGGATGTGTGAAAAATTTTTACAGGAAGTAGACTTTTTTCAGAGGACACA  1638

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 1639  TGAACCATTAACAAGAAAAATATTTAAATAAGAAACTCACCAAGCCAGGAGAATAATGAATACCTGGATGTGCC  1712

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 1713  CCCTAGGAATCTGGATCTCTTCTCTTTTCCCCACCCTGCCCTCAACTCCCCTTACATACATACAGCCTGGATCA  1786

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 1787  CAAGACCCAAGAAAACCATTCCACCAGCTGCTGAGAGAAGAGCCACAAAAGGACCCAGAACTTCTCCATGGCTA  1860

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 1861  CCTTAGAGCACCCTAAAATGTGCTAACAGCCATTGTTAGCATTCAGGAGCTGTTTATTCCCATTTTCACACTAC  1934

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 1935  ACTAAAGAATTTTAAACAATCACAAGATAGACTGGCTGGAAGTTGGTGCTTGGAACATCCCACGTCACCTAAAA  2008

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2009  GCACAGTGCTGCAATCTCAGAAACCCCAGGCTCAGCCAGCAGAGAGAGGAGAAGCAGCTGGACATTGGAGACTA  2082

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2083  TGATTGGACATTAGAGAGAAGGAGCTTGACTTCACAGAGAAAGCATGATGGAATAATTTCAGAGAAAAGTCTGG  2156

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2157  CCAGGGATGACCAGACTTCAGGGGAAGATAATCTTGCTCAATATCCTTTTCTGCTCCCCTTCCTGCTGAGAGTC  2230

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2231  ACTTTGATTGGCAATAAAATATCTCACATTTACCATCTTCAATTTGTTCTTGCAACCTCATTCCTCCTGGATGC  2304

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2305  CAGACAAGAACTCAGGTGCCATGAGTATGGGTGCAAAAGGCTATCACACTGTCCCTCCACTGAGCTGTTAACAC  2378

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2379  TTAAGCTATCCATGGACAGCAAAGCTAAAAGGGCACTGTAAGAGTCCTTCTGGGGTTTCAGAAGTCATGAGCAT  2452

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2453  CCCCCAGATGCTGCCATGGGGCCAGTACAGAGTTTGCTCCTGCCAGAGTCCAAAAATGTCTCAGCTCCTGCACC  2526

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2527  CAGTCACCTGCATGCTCCCCCTCCCACAAGTGGTGGAGCACAGTGGGCTGAGTGAGTGGAGTTTGCCCCTGCCA  2600

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2601  GCACCCGTGCACTCCAGTTCCCACCTGTGAAGGTGTCAGAGAGATATTCTGCTTAAAAATCAGAGTGACTCCAT  2674

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2675  CTTAAATAGCAGCTGGGTGAGATAAGGCTGAGACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTCTAACCT  2748

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2749  TCTATCAGGATGAGATAGAAGGCCAGCATAAGATATAGGTCACGAAGACTCTGCTGATAAAACAGGATGTGGTT  2822

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2823  TAAATAAATGCCAGCCAGAACCCACCAAAACCAAGATGGTGATGCTCATTCTCACTGCTCATTATATGCCAGTA  2896

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2897  TAATGCATTTGCATGCAAAAAGACTCTACCACCAGTGCCATGACAGCTTACAGATGCCATGGCAAGATCTGGAA  2970

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2971  GTTACCCTGTAGCCTCTAAAATGGGGAAGAACCCTCAGTTCTGGAAAATTTCTGCCCCTTTCCTGAAAAACTCA  3044

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 3045  TGAATAATCTACCCTTTGTTTAGCATATAATCAAGAAACAACTATAAGTATAGTCAATCGAGCAGCCAATCTCA  3118

Query 1531  --------------------------------------------------------------------  1530
                                                                                
Sbjct 3119  CCGCTCTGTCTATGGAGTAGTCATTCTTTTATTTACATCTCTAATAAAATTGCTTTCACTTTACTGTA  3186

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