Nucleotide Global Alignment
Description
- Query:
- TRCN0000491572
- Subject:
- NR_146906.1
- Aligned Length:
- 3915
- Identities:
- 1387
- Gaps:
- 2457
Alignment
Query 1 -----------------------ATGCCA--TCAA----CATCCTGCAGAATGAAA---CA--TCTGA------ 34
.||||| ||.| |.||||| |.|| || .|.||
Sbjct 1 GAGGGCGGGAGCGGCAGACTCCGCTGCCAGCTCTACTGGCGTCCTG------GCAAGGGCAGCGCCGAGGGGCG 68
Query 35 ---------CAGAT---ACGTCTCATGG------TG--TA------AGAAATAAG--------TGCCTGCAGTT 74
|||.| .||.|||..|| || || || || |.|||||
Sbjct 69 CTCCCGGTCCAGCTCTCCCGGCTCGGGGGTTCCTTGCCTAGGCGCCAG-----AGCCCCGGGCTCCCTGC---- 133
Query 75 ACTTGGCAATCTTGGCTCTTTGG-------AGAAAAGTGTCACAAAAGATGC---AGAAGGCCTAGCTGCCAGA 138
||.||| |.||.||| || ||.|.||| ||| .|.|||| |.||..|||
Sbjct 134 -CTCGGC--------CGCTGTGGCCTGCATAG---AGCGGCAC------TGCGCGCGGAGGC---GATGGGAGA 186
Query 139 GATGTCCAGAAGATTATAGGG-------------GATTACTTCAGTGAC--------------CAAGACCCACG 185
|| ||||| .|||| || |.|||.|.| ||.|..||.||
Sbjct 187 GA-----AGAAG----GAGGGCGGTGGCGGGGGTGA----TGCAGCGGCCGCTGAGGGTGGCGCAGGGGCCCCG 247
Query 186 TGTCAG-----------AACAG------CAGCTATAAAAGC-CAT-GTTGCAGCTCCAT--GAA-----AGAGG 233
|.||| |.||| |||||..|.|||| ||| | |||.|||||| |.| .|.||
Sbjct 248 -GCCAGCCCGGGGCTGCAGCAGTGCAGACAGCTCCAGAAGCTCATCG--GCATCTCCATTGGCAGCCTGCGCGG 318
Query 234 ACTG------AAAT------------------TACACCAAACAATTTATA---ATC----AGGCCTGTAAATTA 276
.||| ||.| | ||||.|.||....||| |.| ||||||||||||||
Sbjct 319 GCTGGGCACCAAGTGCGCTGTGTCCAACGACCT-CACCGAGCAGGAGATACGGACCCTGGAGGCCTGTAAATTA 391
Query 277 CTCTCTGATGACTATGAACAAGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGCTCTATCCTGA 350
|||||||||||||||||||||||||||||||||||||||.|||||||||||||.||||||||||||||||||||
Sbjct 392 CTCTCTGATGACTATGAACAAGTGCGCAGTGCTGCAGTCTAGCTTATCTGGGTTGTCAGTCAGCTCTATCCTGA 465
Query 351 AAGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 466 AAGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGAAAAATTTGTCACA 539
Query 425 TGGTCAGTGATGGCTCTTGGGTGGTTCGTGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCT 498
|||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TGGTCAGTGATGGCTCTTGGGTGGTTCATGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCT 613
Query 499 CATTTCTTGGAGCAGACCCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGC 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 614 CATTTCTTGGAGCAGACCCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGC 687
Query 573 CAAGGAACTTTACAGTTCGGGGGAGTTTTCCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAAGTAG 646
||||||||||||||||||.||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 688 CAAGGAACTTTACAGTTCAGGGGAGTTTTCCAGTGGCAGAAAGTGGGAAGATGATGCTCCCAAGGAAGAAGTAG 761
Query 647 ATACCGGGGCTGTGAACTTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTAT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 762 ATACCGGGGCTGTGAACTTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTAT 835
Query 721 GAGGTTCGTATTGCTGCTGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCT 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 836 GAGGTTCGTATTGCTGCTGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCT 909
Query 795 TGATTTCCTAGTTGACATGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGAAAAA 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 910 TGATTTCCTAGTTGACATGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGTCCATACATACCATGAGAAAAA 983
Query 869 TCTCTAACAACATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGAT 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 984 TCTCTAACAACATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGAT 1057
Query 943 ATTCGAGAGGCTCTTCATGAACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGT 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1058 ATTCGAGAGGCTCTTCATGAACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGT 1131
Query 1017 GGAGCTGCTGAAAAATTTAACCAAGTACCCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAA 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1132 GGAGCTGCTGAAAAATTTAACCAAGTACCCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAA 1205
Query 1091 GTCGGCATCCAACCCTGGTGCTTCCCTTGGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAA 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1206 GTCGGCATCCAACCCTGGTGCTTCCCTTGGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAA 1279
Query 1165 CCAGACATGGATGATCCAGCTTATATTGCAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAAT 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1280 CCAGACATGGATGATCCAGCTTATATTGCAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAAT 1353
Query 1239 GCCAGCATTGTTCTCAGATCACACCTTCAGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTG 1312
||.|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1354 GCGAGCATTGTTC-------------TCAGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTG 1414
Query 1313 CCTTGAGGTTACCAGGTAGAAAACTGGTGTCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATCCTTCC 1386
||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1415 CCTTGAGGTTGCCAGGTAGAAAACTGGTGTCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATCCTTCG 1488
Query 1387 CAGCAGTTCCTGCAGCAGAGCCTTGAAAGAGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCT 1460
||||||.||||||||||||||||||||.||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1489 CAGCAGCTCCTGCAGCAGAGCCTTGAAGGAGTGTGTAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCT 1562
Query 1461 GCTGGAATTCACCATCAG-------------AGTCGAGGTTTCACCATG--GTGGCC------------AGGC- 1506
|||||||||||||||||| |||||.|| .||| |..||| |.||
Sbjct 1563 GCTGGAATTCACCATCAGGCCTTGCAGGAAAAGTCGTGG------AATGTAGCTGCCCCTTCGTATTTGAAGCA 1630
Query 1507 --------TGGTCTC----------AAAC----TCCT--------GAGCTCAAG-------------------- 1530
|||.||| |||| .||| ||..|||.|
Sbjct 1631 GAGTGATTTGGCCTCAGCAGCAGCGAAACAGAGACCTACAAAATGGAATTCATGTAGAGTGGTGTGGAGAATAA 1704
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 1705 GCAGGTGGTGATTATACATCACATGAGGCTGCAGGCCAAAGCTTTGCAACTTATAATAACAGCACGAACTACAC 1778
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 1779 GAGGACTTTACCCCTTATTTGGGATGTGTGAAAAATTTTTACAGGAAGTAGACTTTTTTCAGAGGTATTTCATC 1852
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 1853 GCTGATTTGCCCCACTTGCAGGACAGCTTTGTGGACAAACTCCTTGACCTTATGCCCCGATTCATGACATCCAA 1926
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 1927 ACCTGCAGAAGTGGTCAAAATTCTACAGACCATGCTGCGACAGAGTGCCTTTCTGCATCTCCCACTTCCAGAGC 2000
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2001 AGATCCACAAAGCCTCAGCCACCATCATTGAGCCAGCAGGCGAGTCAGACAACCCTTTGCGGTTTACCTCTGGG 2074
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2075 TTGGTGGTTGCCCTGGATGTTGATGCAACCCTGGAGCATGTGCAGGATCCTCAGAACACTGTTAAGGTCCAGGT 2148
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2149 CCCAGAGAGCTACTCACTGCATGTGTCTTTGACCTGCTGTTGATTCATCTCCTCTGCTAAGAAGGTGGCTGATG 2222
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2223 GCTGGGCTATTTACACCTAGGAGGGTGTTCCAGGCCAGGCCCCAGGGAGCCTAAAATAATCAAAAAGGACACAT 2296
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2297 GAACCATTAACAAGAAAAATATTTAAATAAGAAACTCACCAAGCCAGGAGAATAATGAATACCTGGATGTGCCC 2370
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2371 CCTAGGAATCTGGATCTCTTCTCTTTTCCCCACCCTGCCCTCAACTCCCCTTACATACATACAGCCTGGATCAC 2444
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2445 AAGACCCAAGAAAACCATTCCACCAGCTGCTGAGAGAAGAGCCACAAAAGGACCCAGAACTTCTCCATGGCTAC 2518
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2519 CTTAGAGCACCCTAAAATGTGCTAACAGCCATTGTTAGCATTCAGGAGCTGTTTATTCCCATTTTCACACTACA 2592
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2593 CTAAAGAATTTTAAACAATCACAAGATAGACTGGCTGGAAGTTGGTGCTTGGAACATCCCACGTCACCTAAAAG 2666
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2667 CACAGTGCTGCAATCTCAGAAACCCCAGGCTCAGCCAGCAGAGAGAGGAGAAGCAGCTGGACATTGGAGACTAT 2740
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2741 GATTGGACATTAGAGAGAAGGAGCTTGACTTCACAGAGAAAGCATGATGGAATAATTTCAGAGAAAAGTCTGGC 2814
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2815 CAGGGATGACCAGACTTCAGGGGAAGATAATCTTGCTCAATATCCTTTTCTGCTCCCCTTCCTGCTGAGAGTCA 2888
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2889 CTTTGATTGGCAATAAAATATCTCACATTTACCATCTTCAATTTGTTCTTGCAACCTCATTCCTCCTGGATGCC 2962
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 2963 AGACAAGAACTCAGGTGCCATGAGTATGGGTGCAAAAGGCTATCACACTGTCCCTCCACTGAGCTGTTAACACT 3036
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 3037 TAAGCTATCCATGGACAGCAAAGCTAAAAGGGCACTGTAAGAGTCCTTCTGGGGTTTCAGAAGTCATGAGCATC 3110
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 3111 CCCCAGATGCTGCCATGGGGCCAGTACAGAGTTTGCTCCTGCCAGAGTCCAAAAATGTCTCAGCTCCTGCACCC 3184
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 3185 AGTCACCTGCATGCTCCCCCTCCCACAAGTGGTGGAGCACAGTGGGCTGAGTGAGTGGAGTTTGCCCCTGCCAG 3258
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 3259 CACCCGTGCACTCCAGTTCCCACCTGTGAAGGTGTCAGAGAGATATTCTGCTTAAAAATCAGAGTGACTCCATC 3332
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 3333 TTAAATAGCAGCTGGGTGAGATAAGGCTGAGACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTCTAACCTT 3406
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 3407 CTATCAGGATGAGATAGAAGGCCAGCATAAGATATAGGTCACGAAGACTCTGCTGATAAAACAGGATGTGGTTT 3480
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 3481 AAATAAATGCCAGCCAGAACCCACCAAAACCAAGATGGTGATGCTCATTCTCACTGCTCATTATATGCCAGTAT 3554
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 3555 AATGCATTTGCATGCAAAAAGACTCTACCACCAGTGCCATGACAGCTTACAGATGCCATGGCAAGATCTGGAAG 3628
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 3629 TTACCCTGTAGCCTCTAAAATGGGGAAGAACCCTCAGTTCTGGAAAATTTCTGCCCCTTTCCTGAAAAACTCAT 3702
Query 1531 -------------------------------------------------------------------------- 1530
Sbjct 3703 GAATAATCTACCCTTTGTTTAGCATATAATCAAGAAACAACTATAAGTATAGTCAATCGAGCAGCCAATCTCAC 3776
Query 1531 ------------------------------------------------------------------- 1530
Sbjct 3777 CGCTCTGTCTATGGAGTAGTCATTCTTTTATTTACATCTCTAATAAAATTGCTTTCACTTTACTGTA 3843
