Nucleotide Global Alignment

Description

Query:
TRCN0000491974
Subject:
XM_017313219.1
Aligned Length:
1404
Identities:
1052
Gaps:
246

Alignment

Query    1  ATGATGTATTTTGTGATCGCAGCGATGAAAGCTCAAATTGAAATTATTCCATGCAAGATCTGTGGAGACAAATC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ATCAGGAATCCATTATGGTGTCATTACATGTGAAGGCTGCAAGGGCTTTTTCAGGAGAAGTCAGCAAAGCAATG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCACCTACTCCTGTCCTCGTCAGAAGAACTGTTTGATTGATCGAACCAGTAGAAACCGCTGCCAACACTGTCGA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TTACAGAAATGCCTTGCCGTAGGGATGTCTCGAGATGCTGTAAAATTTGGCCGAATGTCAAAAAAGCAGAGAGA  296
                                    |||||||||||||||||.||.|||||.||.|||||.||.|||||||||||
Sbjct    1  ------------------------ATGTCTCGAGATGCTGTCAAGTTTGGTCGGATGTCCAAGAAGCAGAGAGA  50

Query  297  CAGCTTGTATGCAGAAGTACAGAAACACCGGATGCAGCAGCAGCAGCGCGACCACCAGCAGCAGCCTGGAGAGG  370
            |||||||||.||.||.||.|||||.|||||||||||||||||||||||.||||||||||||||||||||.||||
Sbjct   51  CAGCTTGTACGCCGAGGTGCAGAAGCACCGGATGCAGCAGCAGCAGCGAGACCACCAGCAGCAGCCTGGGGAGG  124

Query  371  CTGAGCCGCTGACGCCCACCTACAACATCTCGGCCAACGGGCTGACGGAACTTCACGACGACCTCAGTAACTAC  444
            |.|||||||||||||||||||||||||||||.|||||.||||||||||||||.||.||.||||||||.|.|||.
Sbjct  125  CGGAGCCGCTGACGCCCACCTACAACATCTCAGCCAATGGGCTGACGGAACTGCATGATGACCTCAGCACCTAT  198

Query  445  ATTGACGGGCACACCCCTGAGGGGAGTAAGGCAGACTCCGCCGTCAGCAGCTTCTACCTGGACATACAGCCTTC  518
            ||.||.|||||||||||.|||||.||.|||||.|||||.||||||||||||||||||||||||||.|||||.||
Sbjct  199  ATGGATGGGCACACCCCCGAGGGCAGCAAGGCCGACTCAGCCGTCAGCAGCTTCTACCTGGACATCCAGCCCTC  272

Query  519  CCCAGACCAGTCAGGTCTTGATATCAATGGAATCAAACCAGAACCAATATGTGACTACACACCAGCATCAGGCT  592
            ||||||||||||.||..|.||.||||||||.||||||||.|||||.|||||||||||||||||||||||.||||
Sbjct  273  CCCAGACCAGTCGGGATTGGACATCAATGGGATCAAACCCGAACCCATATGTGACTACACACCAGCATCTGGCT  346

Query  593  TCTTTCCCTACTGTTCGTTCACCAACGGCGAGACTTCCCCAACTGTGTCCATGGCAGAATTAGAACACCTTGCA  666
            ||||.|||||||||||.|||||||||||.||||||||||||||.|||||||||||||||.|||||||||||||.
Sbjct  347  TCTTCCCCTACTGTTCCTTCACCAACGGAGAGACTTCCCCAACCGTGTCCATGGCAGAACTAGAACACCTTGCC  420

Query  667  CAGAATATATCTAAATCGCATCTGGAAACCTGCCAATACTTGAGAGAAGAGCTCCAGCAGATAACGTGGCAGAC  740
            |||||.|||||.|||||.||.||||||||||||||.||||||.|.|||||||||||||||||||||||||||||
Sbjct  421  CAGAACATATCCAAATCCCACCTGGAAACCTGCCAGTACTTGCGGGAAGAGCTCCAGCAGATAACGTGGCAGAC  494

Query  741  CTTTTTACAGGAAGAAATTGAGAACTATCAAAACAAGCAGCGGGAGGTGATGTGGCAATTGTGTGCCATCAAAA  814
            |||..|.|||||.||.|||||.|||||.||.|||||||||.|.||||||||||||||..|||||||||||||.|
Sbjct  495  CTTCCTGCAGGAGGAGATTGAAAACTACCAGAACAAGCAGAGAGAGGTGATGTGGCAGCTGTGTGCCATCAAGA  568

Query  815  TTACAGAAGCTATACAGTATGTGGTGGAGTTTGCCAAACGCATTGATGGATTTATGGAACTGTGTCAAAATGAT  888
            |||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct  569  TTACAGAAGCTATCCAGTATGTGGTGGAGTTTGCCAAACGCATTGATGGATTTATGGAGCTGTGTCAAAATGAT  642

Query  889  CAAATTGTGCTTCTAAAAGCAGGTTCTCTAGAGGTGGTGTTTATCAGAATGTGCCGTGCCTTTGACTCTCAGAA  962
            |||||||||||||||||||||||.||.|||||||||||||||||.||.||||||||||||||||||||||||||
Sbjct  643  CAAATTGTGCTTCTAAAAGCAGGCTCGCTAGAGGTGGTGTTTATTAGGATGTGCCGTGCCTTTGACTCTCAGAA  716

Query  963  CAACACCGTGTACTTTGATGGGAAGTATGCCAGCCCCGACGTCTTCAAATCCTTAGGTTGTGAAGACTTTATTA  1036
            ||||||||||||||||||.|||||||||||.||||||||.||||||||.|||.||||||||||||||||.||.|
Sbjct  717  CAACACCGTGTACTTTGACGGGAAGTATGCGAGCCCCGATGTCTTCAAGTCCCTAGGTTGTGAAGACTTCATCA  790

Query 1037  GCTTTGTGTTTGAATTTGGAAAGAGTTTATGTTCTATGCACCTGACTGAAGATGAAATTGCATTATTTTCTGCA  1110
            |||||||||||||||||||.||||||||.|||||||||||||||||.|||||.|||||.||.||||||||||||
Sbjct  791  GCTTTGTGTTTGAATTTGGGAAGAGTTTGTGTTCTATGCACCTGACCGAAGACGAAATCGCGTTATTTTCTGCA  864

Query 1111  TTTGTACTGATGTCAGCAGATCGCTCATGGCTGCAAGAAAAGGTAAAAATTGAAAAACTGCAACAGAAAATTCA  1184
            ||.||||||||||||||.||||||||.|||||.||.||||||||||||||.|||||.|||||||||||||||||
Sbjct  865  TTCGTACTGATGTCAGCGGATCGCTCGTGGCTTCAGGAAAAGGTAAAAATAGAAAAGCTGCAACAGAAAATTCA  938

Query 1185  GCTAGCTCTTCAACACGTCCTACAGAAGAATCACCGAGAAGATGGAATACTAACAAAGTTAATATGCAAGGTGT  1258
            |||.||.|||||.|||||||||||||||||.|||||||||||||||||.|||||.|||.|||||||||||||||
Sbjct  939  GCTGGCCCTTCAGCACGTCCTACAGAAGAACCACCGAGAAGATGGAATTCTAACCAAGCTAATATGCAAGGTGT  1012

Query 1259  CTACATTAAGAGCCTTATGTGGACGACATACAGAAAAGCTAATGGCATTTAAAGCAATATACCCAGACATTGTG  1332
            ||||.|||||||||.||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1013  CTACGTTAAGAGCCCTATGTGGACGACATACGGAAAAGCTAATGGCATTTAAAGCAATATACCCAGACATTGTG  1086

Query 1333  CGACTTCATTTTCCTCCATTATACAAGGAGTTGTTCACTTCAGAATTTGAGCCAGCAATGCAAATTGATGGG  1404
            |||||.|||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||.||||||
Sbjct 1087  CGACTCCATTTTCCTCCATTATACAAGGAATTGTTCACTTCAGAATTTGAGCCAGCCATGCAAATCGATGGG  1158

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